RNA–Protein interactions for RNA: ENST00000442937.5

LINC00578-202, long intergenic non-protein coding RNA 578, humanhuman

TSL 3 BASIC

Gene LINC00578, Length 612 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-202ENST00000442937 GRIN2AQ12879 1464 aa12.98□□□□□ -0.33
LINC00578-202ENST00000442937 NUP160Q12769 1436 aa12.98□□□□□ -0.33
LINC00578-202ENST00000442937 CACNB1Q02641 598 aaPredicted RBP12.97□□□□□ -0.33
LINC00578-202ENST00000442937 ADAMTS12P58397 1594 aa12.96□□□□□ -0.33
LINC00578-202ENST00000442937 TRIM41Q8WV44 630 aa12.95□□□□□ -0.34
LINC00578-202ENST00000442937 RIMBP3CA6NJZ7 1639 aa12.95□□□□□ -0.34
LINC00578-202ENST00000442937 RIMBP3BA6NNM3 1639 aa12.95□□□□□ -0.34
LINC00578-202ENST00000442937 RIMBP3Q9UFD9 1639 aa12.95□□□□□ -0.34
LINC00578-202ENST00000442937 CYB5RLQ6IPT4 315 aa12.92□□□□□ -0.34
LINC00578-202ENST00000442937 CARMIL1Q5VZK9 1371 aa12.91□□□□□ -0.34
LINC00578-202ENST00000442937 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
LINC00578-202ENST00000442937 JPH4Q96JJ6 628 aa12.89□□□□□ -0.35
LINC00578-202ENST00000442937 ARAP1Q96P48 1450 aa12.89□□□□□ -0.35
LINC00578-202ENST00000442937 CEP170Q5SW79 1584 aa12.88□□□□□ -0.35
LINC00578-202ENST00000442937 RUSC2Q8N2Y8 1516 aa12.85□□□□□ -0.35
LINC00578-202ENST00000442937 KIAA0586Q9BVV6 1533 aa12.84□□□□□ -0.35
LINC00578-202ENST00000442937 CUL7Q14999 1698 aa12.83□□□□□ -0.36
LINC00578-202ENST00000442937 HOXD11P31277 338 aaPredicted RBP12.82□□□□□ -0.36
LINC00578-202ENST00000442937 SHROOM2Q13796 1616 aa12.81□□□□□ -0.36
LINC00578-202ENST00000442937 PRG4Q92954 1404 aaPredicted RBP12.79□□□□□ -0.36
LINC00578-202ENST00000442937 RAPGEF2Q9Y4G8 1499 aa12.78□□□□□ -0.36
LINC00578-202ENST00000442937 ERCC6L2Q5T890 1561 aa12.77□□□□□ -0.36
LINC00578-202ENST00000442937 CSRNP3Q8WYN3 585 aa12.77□□□□□ -0.37
LINC00578-202ENST00000442937 PRXQ9BXM0 1461 aa12.77□□□□□ -0.37
LINC00578-202ENST00000442937 DCAF8L1A6NGE4 600 aa12.76□□□□□ -0.37
LINC00578-202ENST00000442937 RNF216Q9NWF9 866 aaPredicted RBP12.75□□□□□ -0.37
LINC00578-202ENST00000442937 EEA1Q15075 1411 aa12.73□□□□□ -0.37
LINC00578-202ENST00000442937 NCBP3Q53F19 620 aaKnown RBP12.69□□□□□ -0.38
LINC00578-202ENST00000442937 CARMIL2Q6F5E8 1435 aa12.67□□□□□ -0.38
LINC00578-202ENST00000442937 TNIKQ9UKE5 1360 aa12.67□□□□□ -0.38
LINC00578-202ENST00000442937 IQGAP2Q13576 1575 aa12.66□□□□□ -0.38
LINC00578-202ENST00000442937 PTPRGP23470 1445 aa12.66□□□□□ -0.38
LINC00578-202ENST00000442937 UGGT2Q9NYU1 1516 aa12.66□□□□□ -0.38
LINC00578-202ENST00000442937 DISP1Q96F81 1524 aa12.65□□□□□ -0.38
LINC00578-202ENST00000442937 TRHP20396 242 aaPredicted RBP12.63□□□□□ -0.39
LINC00578-202ENST00000442937 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
LINC00578-202ENST00000442937 FAM9AQ8IZU1 332 aaPredicted RBP12.59□□□□□ -0.39
LINC00578-202ENST00000442937 UHRF1BP1LA0JNW5 1464 aa12.58□□□□□ -0.4
LINC00578-202ENST00000442937 UACAQ9BZF9 1416 aa12.57□□□□□ -0.4
LINC00578-202ENST00000442937 GOLGA3Q08378 1498 aa12.57□□□□□ -0.4
LINC00578-202ENST00000442937 ADCY10Q96PN6 1610 aa12.55□□□□□ -0.4
LINC00578-202ENST00000442937 KIAA0556O60303 1618 aa12.54□□□□□ -0.4
LINC00578-202ENST00000442937 MAPKBP1O60336 1514 aa12.53□□□□□ -0.4
LINC00578-202ENST00000442937 ABCC2Q92887 1545 aa12.53□□□□□ -0.4
LINC00578-202ENST00000442937 TTBK1Q5TCY1 1321 aaPredicted RBP12.52□□□□□ -0.41
LINC00578-202ENST00000442937 ABCC10Q5T3U5 1492 aa12.52□□□□□ -0.41
LINC00578-202ENST00000442937 KIF21BO75037 1637 aa12.51□□□□□ -0.41
LINC00578-202ENST00000442937 CTTNBP2Q8WZ74 1663 aa12.51□□□□□ -0.41
LINC00578-202ENST00000442937 KDM5BQ9UGL1 1544 aa12.51□□□□□ -0.41
LINC00578-202ENST00000442937 NPM3O75607 178 aaKnown RBP12.5□□□□□ -0.41
LINC00578-202ENST00000442937 FAM69CQ0P6D2 419 aa12.49□□□□□ -0.41
LINC00578-202ENST00000442937 RNF39Q9H2S5 420 aa12.48□□□□□ -0.41
LINC00578-202ENST00000442937 PLB1Q6P1J6 1458 aa12.47□□□□□ -0.41
LINC00578-202ENST00000442937 P3H3Q8IVL6 736 aa12.47□□□□□ -0.41
LINC00578-202ENST00000442937 UBTFP17480 764 aaKnown RBP12.46□□□□□ -0.41
LINC00578-202ENST00000442937 ABCA8O94911 1581 aa12.46□□□□□ -0.42
LINC00578-202ENST00000442937 SAMD9Q5K651 1589 aa12.46□□□□□ -0.42
LINC00578-202ENST00000442937 ASXL2Q76L83 1435 aa12.45□□□□□ -0.42
LINC00578-202ENST00000442937 DIP2BQ9P265 1576 aa12.41□□□□□ -0.42
LINC00578-202ENST00000442937 ATP10BO94823 1461 aa12.4□□□□□ -0.42
LINC00578-202ENST00000442937 GLI2P10070 1586 aa12.39□□□□□ -0.43
LINC00578-202ENST00000442937 KIF13AQ9H1H9 1805 aa12.39□□□□□ -0.43
LINC00578-202ENST00000442937 EFCAB5A4FU69 1503 aa12.39□□□□□ -0.43
LINC00578-202ENST00000442937 FHOD3Q2V2M9 1422 aa12.38□□□□□ -0.43
LINC00578-202ENST00000442937 EPRSP07814 1512 aaKnown RBP12.38□□□□□ -0.43
LINC00578-202ENST00000442937 RANGAP1P46060 587 aaPredicted RBP12.38□□□□□ -0.43
LINC00578-202ENST00000442937 ARHGAP35Q9NRY4 1499 aa12.36□□□□□ -0.43
LINC00578-202ENST00000442937 WDR7Q9Y4E6 1490 aa12.36□□□□□ -0.43
LINC00578-202ENST00000442937 EHMT2Q96KQ7 1210 aa12.36□□□□□ -0.43
LINC00578-202ENST00000442937 ZCCHC11Q5TAX3 1644 aaKnown RBP12.36□□□□□ -0.43
LINC00578-202ENST00000442937 NUP153P49790 1475 aaKnown RBP12.34□□□□□ -0.43
LINC00578-202ENST00000442937 KCNA4P22459 653 aa12.33□□□□□ -0.44
LINC00578-202ENST00000442937 FMN1Q68DA7 1419 aa12.32□□□□□ -0.44
LINC00578-202ENST00000442937 KCNH8Q96L42 1107 aa12.32□□□□□ -0.44
LINC00578-202ENST00000442937 RAPGEF6Q8TEU7 1601 aa12.31□□□□□ -0.44
LINC00578-202ENST00000442937 PLEKHD1A6NEE1 506 aa12.31□□□□□ -0.44
LINC00578-202ENST00000442937 ARID3CA6NKF2 412 aa12.3□□□□□ -0.44
LINC00578-202ENST00000442937 CD109Q6YHK3 1445 aa12.28□□□□□ -0.44
LINC00578-202ENST00000442937 MAGI3Q5TCQ9 1506 aa12.28□□□□□ -0.44
LINC00578-202ENST00000442937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.27□□□□□ -0.45
LINC00578-202ENST00000442937 HNRNPUL2Q1KMD3 747 aaKnown RBP12.27□□□□□ -0.45
LINC00578-202ENST00000442937 MAP3K4Q9Y6R4 1608 aa12.26□□□□□ -0.45
LINC00578-202ENST00000442937 C1QBPQ07021 282 aaKnown RBP12.26□□□□□ -0.45
LINC00578-202ENST00000442937 CLIP1P30622 1438 aa12.26□□□□□ -0.45
LINC00578-202ENST00000442937 TEX14Q8IWB6 1497 aa12.26□□□□□ -0.45
LINC00578-202ENST00000442937 COL17A1Q9UMD9 1497 aaPredicted RBP12.26□□□□□ -0.45
LINC00578-202ENST00000442937 PHLDB1Q86UU1 1377 aa12.25□□□□□ -0.45
LINC00578-202ENST00000442937 PPRC1Q5VV67 1664 aaKnown RBP12.25□□□□□ -0.45
LINC00578-202ENST00000442937 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.24□□□□□ -0.45
LINC00578-202ENST00000442937 CASKIN1Q8WXD9 1431 aa12.23□□□□□ -0.45
LINC00578-202ENST00000442937 LOC105371045A0A1W2PR82 267 aa12.23□□□□□ -0.45
LINC00578-202ENST00000442937 CDK11AQ9UQ88 783 aaPredicted RBP12.23□□□□□ -0.45
LINC00578-202ENST00000442937 CFAP43Q8NDM7 1665 aa12.21□□□□□ -0.45
LINC00578-202ENST00000442937 ABCA9Q8IUA7 1624 aa12.2□□□□□ -0.46
LINC00578-202ENST00000442937 ATP1B4Q9UN42 357 aaPredicted RBP12.2□□□□□ -0.46
LINC00578-202ENST00000442937 TSPOAP1O95153 1857 aa12.2□□□□□ -0.46
LINC00578-202ENST00000442937 KDM6BO15054 1643 aa12.19□□□□□ -0.46
LINC00578-202ENST00000442937 CDK13Q14004 1512 aaKnown RBP12.19□□□□□ -0.46
LINC00578-202ENST00000442937 ARAP3Q8WWN8 1544 aa12.18□□□□□ -0.46
LINC00578-202ENST00000442937 NEO1Q92859 1461 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms