RNA–Protein interactions for RNA: ENST00000442265.2

IRF3-204, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-204ENST00000442265 RUSC2Q8N2Y8 1516 aa28.7■■■□□ 2.19
IRF3-204ENST00000442265 PRG4Q92954 1404 aaPredicted RBP28.69■■■□□ 2.18
IRF3-204ENST00000442265 KIAA0586Q9BVV6 1533 aa28.64■■■□□ 2.18
IRF3-204ENST00000442265 CARMIL1Q5VZK9 1371 aa28.62■■■□□ 2.17
IRF3-204ENST00000442265 RAPGEF2Q9Y4G8 1499 aa28.38■■■□□ 2.13
IRF3-204ENST00000442265 IQGAP2Q13576 1575 aa28.34■■■□□ 2.13
IRF3-204ENST00000442265 CARMIL2Q6F5E8 1435 aa28.32■■■□□ 2.12
IRF3-204ENST00000442265 ADCY10Q96PN6 1610 aa28.31■■■□□ 2.12
IRF3-204ENST00000442265 PTPRGP23470 1445 aa28.3■■■□□ 2.12
IRF3-204ENST00000442265 NPM1P06748 294 aaKnown RBP eCLIP28.29■■■□□ 2.12
IRF3-204ENST00000442265 MAPKBP1O60336 1514 aa28.28■■■□□ 2.12
IRF3-204ENST00000442265 TNIKQ9UKE5 1360 aa28.27■■■□□ 2.12
IRF3-204ENST00000442265 DISP1Q96F81 1524 aa28.23■■■□□ 2.11
IRF3-204ENST00000442265 UGGT2Q9NYU1 1516 aa28.23■■■□□ 2.11
IRF3-204ENST00000442265 ABCC10Q5T3U5 1492 aa28.22■■■□□ 2.11
IRF3-204ENST00000442265 PRXQ9BXM0 1461 aa28.21■■■□□ 2.11
IRF3-204ENST00000442265 KIF13AQ9H1H9 1805 aa28.2■■■□□ 2.1
IRF3-204ENST00000442265 UHRF1BP1LA0JNW5 1464 aa28.15■■■□□ 2.1
IRF3-204ENST00000442265 FAM69CQ0P6D2 419 aa28.13■■■□□ 2.09
IRF3-204ENST00000442265 ABCC2Q92887 1545 aa28.13■■■□□ 2.09
IRF3-204ENST00000442265 DIP2BQ9P265 1576 aa28.11■■■□□ 2.09
IRF3-204ENST00000442265 UACAQ9BZF9 1416 aa28.09■■■□□ 2.09
IRF3-204ENST00000442265 KIAA0556O60303 1618 aa28.07■■■□□ 2.08
IRF3-204ENST00000442265 TTBK1Q5TCY1 1321 aaPredicted RBP28.06■■■□□ 2.08
IRF3-204ENST00000442265 CTTNBP2Q8WZ74 1663 aa28.04■■■□□ 2.08
IRF3-204ENST00000442265 CSRNP3Q8WYN3 585 aa28.01■■■□□ 2.07
IRF3-204ENST00000442265 GOLGA3Q08378 1498 aa28.01■■■□□ 2.07
IRF3-204ENST00000442265 KDM5BQ9UGL1 1544 aa28■■■□□ 2.07
IRF3-204ENST00000442265 PLB1Q6P1J6 1458 aa27.99■■■□□ 2.07
IRF3-204ENST00000442265 EEA1Q15075 1411 aa27.98■■■□□ 2.07
IRF3-204ENST00000442265 ASXL2Q76L83 1435 aa27.98■■■□□ 2.07
IRF3-204ENST00000442265 GLI2P10070 1586 aa27.9■■■□□ 2.06
IRF3-204ENST00000442265 ABCA8O94911 1581 aa27.84■■■□□ 2.05
IRF3-204ENST00000442265 ZCCHC11Q5TAX3 1644 aaKnown RBP27.84■■■□□ 2.05
IRF3-204ENST00000442265 EPRSP07814 1512 aaKnown RBP27.82■■■□□ 2.04
IRF3-204ENST00000442265 KDM6BO15054 1643 aa27.76■■■□□ 2.03
IRF3-204ENST00000442265 WDR7Q9Y4E6 1490 aa27.76■■■□□ 2.03
IRF3-204ENST00000442265 SAMD9Q5K651 1589 aa27.75■■■□□ 2.03
IRF3-204ENST00000442265 TSPOAP1O95153 1857 aa27.74■■■□□ 2.03
IRF3-204ENST00000442265 PPRC1Q5VV67 1664 aaKnown RBP27.73■■■□□ 2.03
IRF3-204ENST00000442265 MAP3K4Q9Y6R4 1608 aa27.71■■■□□ 2.03
IRF3-204ENST00000442265 CHIC1Q5VXU3 224 aa27.71■■■□□ 2.03
IRF3-204ENST00000442265 FAM9AQ8IZU1 332 aaPredicted RBP27.71■■■□□ 2.03
IRF3-204ENST00000442265 KIF21BO75037 1637 aa27.68■■■□□ 2.02
IRF3-204ENST00000442265 P3H3Q8IVL6 736 aa27.68■■■□□ 2.02
IRF3-204ENST00000442265 AEBP2Q6ZN18 517 aaPredicted RBP27.67■■■□□ 2.02
IRF3-204ENST00000442265 TEX14Q8IWB6 1497 aa27.64■■■□□ 2.02
IRF3-204ENST00000442265 ATP10BO94823 1461 aa27.63■■■□□ 2.01
IRF3-204ENST00000442265 COL17A1Q9UMD9 1497 aaPredicted RBP27.57■■■□□ 2
IRF3-204ENST00000442265 MAGI3Q5TCQ9 1506 aa27.57■■■□□ 2
IRF3-204ENST00000442265 CD109Q6YHK3 1445 aa27.55■■■□□ 2
IRF3-204ENST00000442265 RAPGEF6Q8TEU7 1601 aa27.55■■■□□ 2
IRF3-204ENST00000442265 CFAP43Q8NDM7 1665 aa27.54■■■□□ 2
IRF3-204ENST00000442265 KCNH8Q96L42 1107 aa27.54■■■□□ 2
IRF3-204ENST00000442265 EFCAB5A4FU69 1503 aa27.53■■■□□ 2
IRF3-204ENST00000442265 FHOD3Q2V2M9 1422 aa27.52■■■□□ 2
IRF3-204ENST00000442265 NUP153P49790 1475 aaKnown RBP27.5■■□□□ 1.99
IRF3-204ENST00000442265 ARID3CA6NKF2 412 aa27.47■■□□□ 1.99
IRF3-204ENST00000442265 RANGAP1P46060 587 aaPredicted RBP27.46■■□□□ 1.99
IRF3-204ENST00000442265 KDM4FA0A1W2PPD8 638 aa27.43■■□□□ 1.98
IRF3-204ENST00000442265 UBTFP17480 764 aaKnown RBP27.41■■□□□ 1.98
IRF3-204ENST00000442265 ABCA9Q8IUA7 1624 aa27.41■■□□□ 1.98
IRF3-204ENST00000442265 ARAP3Q8WWN8 1544 aa27.36■■□□□ 1.97
IRF3-204ENST00000442265 PHLDB1Q86UU1 1377 aa27.35■■□□□ 1.97
IRF3-204ENST00000442265 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.35■■□□□ 1.97
IRF3-204ENST00000442265 HNRNPUL2Q1KMD3 747 aaKnown RBP27.35■■□□□ 1.97
IRF3-204ENST00000442265 ARHGAP35Q9NRY4 1499 aa27.32■■□□□ 1.96
IRF3-204ENST00000442265 PLEKHD1A6NEE1 506 aa27.31■■□□□ 1.96
IRF3-204ENST00000442265 FMN1Q68DA7 1419 aa27.3■■□□□ 1.96
IRF3-204ENST00000442265 EHMT2Q96KQ7 1210 aa27.28■■□□□ 1.96
IRF3-204ENST00000442265 NEO1Q92859 1461 aa27.27■■□□□ 1.96
IRF3-204ENST00000442265 ADGRL1O94910 1474 aa27.24■■□□□ 1.95
IRF3-204ENST00000442265 CDK13Q14004 1512 aaKnown RBP27.19■■□□□ 1.94
IRF3-204ENST00000442265 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.17■■□□□ 1.94
IRF3-204ENST00000442265 HECW1Q76N89 1606 aa27.16■■□□□ 1.94
IRF3-204ENST00000442265 RAPGEF3O95398 923 aa27.12■■□□□ 1.93
IRF3-204ENST00000442265 CDK11AQ9UQ88 783 aaPredicted RBP27.1■■□□□ 1.93
IRF3-204ENST00000442265 TTC37Q6PGP7 1564 aa27.09■■□□□ 1.93
IRF3-204ENST00000442265 FANCAO15360 1455 aa27.09■■□□□ 1.93
IRF3-204ENST00000442265 AKNAQ7Z591 1439 aa27.08■■□□□ 1.93
IRF3-204ENST00000442265 FRMPD1Q5SYB0 1578 aa27.07■■□□□ 1.92
IRF3-204ENST00000442265 ATP1B4Q9UN42 357 aaPredicted RBP27.07■■□□□ 1.92
IRF3-204ENST00000442265 CFAP74Q9C0B2 1584 aa27.06■■□□□ 1.92
IRF3-204ENST00000442265 PLCH2O75038 1416 aa27.06■■□□□ 1.92
IRF3-204ENST00000442265 DENND4BO75064 1496 aaPredicted RBP27.05■■□□□ 1.92
IRF3-204ENST00000442265 CASKIN1Q8WXD9 1431 aa27.04■■□□□ 1.92
IRF3-204ENST00000442265 TROQ12816 1431 aaPredicted RBP27.02■■□□□ 1.92
IRF3-204ENST00000442265 RICTORQ6R327 1708 aa26.98■■□□□ 1.91
IRF3-204ENST00000442265 CLIP1P30622 1438 aa26.97■■□□□ 1.91
IRF3-204ENST00000442265 LRRIQ1Q96JM4 1722 aa26.96■■□□□ 1.91
IRF3-204ENST00000442265 CCDC18Q5T9S5 1454 aa26.96■■□□□ 1.91
IRF3-204ENST00000442265 PCF11O94913 1555 aaKnown RBP26.95■■□□□ 1.9
IRF3-204ENST00000442265 ZMYM4Q5VZL5 1548 aa26.95■■□□□ 1.9
IRF3-204ENST00000442265 KIF14Q15058 1648 aa26.94■■□□□ 1.9
IRF3-204ENST00000442265 EFCAB2Q5VUJ9 269 aa26.93■■□□□ 1.9
IRF3-204ENST00000442265 FYCO1Q9BQS8 1478 aa26.93■■□□□ 1.9
IRF3-204ENST00000442265 ARHGEF40Q8TER5 1519 aa26.91■■□□□ 1.9
IRF3-204ENST00000442265 MAGI2Q86UL8 1455 aa26.91■■□□□ 1.9
IRF3-204ENST00000442265 SCAPERQ9BY12 1400 aa26.9■■□□□ 1.9
IRF3-204ENST00000442265 MYO5CQ9NQX4 1742 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms