RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 KIAA0586Q9BVV6 1533 aa25.22■■□□□ 1.63
CSNK1E-210ENST00000442216 ARAP1Q96P48 1450 aa25.18■■□□□ 1.62
CSNK1E-210ENST00000442216 PRXQ9BXM0 1461 aa25.18■■□□□ 1.62
CSNK1E-210ENST00000442216 CSRNP3Q8WYN3 585 aa25.15■■□□□ 1.62
CSNK1E-210ENST00000442216 JPH4Q96JJ6 628 aa25.15■■□□□ 1.62
CSNK1E-210ENST00000442216 ERCC6L2Q5T890 1561 aa25.1■■□□□ 1.61
CSNK1E-210ENST00000442216 IQGAP2Q13576 1575 aa25.1■■□□□ 1.61
CSNK1E-210ENST00000442216 CYB5RLQ6IPT4 315 aa25.09■■□□□ 1.61
CSNK1E-210ENST00000442216 PRG4Q92954 1404 aaPredicted RBP25.09■■□□□ 1.61
CSNK1E-210ENST00000442216 CTTNBP2Q8WZ74 1663 aa25.08■■□□□ 1.61
CSNK1E-210ENST00000442216 KIF21BO75037 1637 aa24.99■■□□□ 1.59
CSNK1E-210ENST00000442216 UGGT2Q9NYU1 1516 aa24.97■■□□□ 1.59
CSNK1E-210ENST00000442216 FAM9AQ8IZU1 332 aaPredicted RBP24.97■■□□□ 1.59
CSNK1E-210ENST00000442216 CARMIL2Q6F5E8 1435 aa24.95■■□□□ 1.58
CSNK1E-210ENST00000442216 DISP1Q96F81 1524 aa24.88■■□□□ 1.57
CSNK1E-210ENST00000442216 KIAA0556O60303 1618 aa24.86■■□□□ 1.57
CSNK1E-210ENST00000442216 TNIKQ9UKE5 1360 aa24.85■■□□□ 1.57
CSNK1E-210ENST00000442216 GOLGA3Q08378 1498 aa24.84■■□□□ 1.57
CSNK1E-210ENST00000442216 PTPRGP23470 1445 aa24.8■■□□□ 1.56
CSNK1E-210ENST00000442216 ADCY10Q96PN6 1610 aa24.74■■□□□ 1.55
CSNK1E-210ENST00000442216 SAMD9Q5K651 1589 aa24.72■■□□□ 1.55
CSNK1E-210ENST00000442216 UHRF1BP1LA0JNW5 1464 aa24.68■■□□□ 1.54
CSNK1E-210ENST00000442216 UBTFP17480 764 aaKnown RBP24.67■■□□□ 1.54
CSNK1E-210ENST00000442216 UACAQ9BZF9 1416 aa24.66■■□□□ 1.54
CSNK1E-210ENST00000442216 NPM1P06748 294 aaKnown RBP eCLIP24.64■■□□□ 1.54
CSNK1E-210ENST00000442216 EFCAB5A4FU69 1503 aa24.64■■□□□ 1.53
CSNK1E-210ENST00000442216 ABCC2Q92887 1545 aa24.64■■□□□ 1.53
CSNK1E-210ENST00000442216 TTBK1Q5TCY1 1321 aaPredicted RBP24.63■■□□□ 1.53
CSNK1E-210ENST00000442216 MAPKBP1O60336 1514 aa24.61■■□□□ 1.53
CSNK1E-210ENST00000442216 EHMT2Q96KQ7 1210 aa24.58■■□□□ 1.53
CSNK1E-210ENST00000442216 ABCA8O94911 1581 aa24.58■■□□□ 1.52
CSNK1E-210ENST00000442216 TRHP20396 242 aaPredicted RBP24.56■■□□□ 1.52
CSNK1E-210ENST00000442216 P3H3Q8IVL6 736 aa24.55■■□□□ 1.52
CSNK1E-210ENST00000442216 PLB1Q6P1J6 1458 aa24.55■■□□□ 1.52
CSNK1E-210ENST00000442216 KDM5BQ9UGL1 1544 aa24.55■■□□□ 1.52
CSNK1E-210ENST00000442216 RANGAP1P46060 587 aaPredicted RBP24.51■■□□□ 1.51
CSNK1E-210ENST00000442216 ZCCHC11Q5TAX3 1644 aaKnown RBP24.5■■□□□ 1.51
CSNK1E-210ENST00000442216 KIF13AQ9H1H9 1805 aa24.49■■□□□ 1.51
CSNK1E-210ENST00000442216 FHOD3Q2V2M9 1422 aa24.49■■□□□ 1.51
CSNK1E-210ENST00000442216 RAPGEF6Q8TEU7 1601 aa24.47■■□□□ 1.51
CSNK1E-210ENST00000442216 ARHGAP35Q9NRY4 1499 aa24.46■■□□□ 1.51
CSNK1E-210ENST00000442216 ABCC10Q5T3U5 1492 aa24.45■■□□□ 1.51
CSNK1E-210ENST00000442216 DIP2BQ9P265 1576 aa24.42■■□□□ 1.5
CSNK1E-210ENST00000442216 ASXL2Q76L83 1435 aa24.42■■□□□ 1.5
CSNK1E-210ENST00000442216 FMN1Q68DA7 1419 aa24.39■■□□□ 1.5
CSNK1E-210ENST00000442216 ATP10BO94823 1461 aa24.35■■□□□ 1.49
CSNK1E-210ENST00000442216 NUP153P49790 1475 aaKnown RBP24.34■■□□□ 1.49
CSNK1E-210ENST00000442216 FAM69CQ0P6D2 419 aa24.34■■□□□ 1.49
CSNK1E-210ENST00000442216 GLI2P10070 1586 aa24.33■■□□□ 1.49
CSNK1E-210ENST00000442216 CLIP1P30622 1438 aa24.33■■□□□ 1.49
CSNK1E-210ENST00000442216 WDR7Q9Y4E6 1490 aa24.32■■□□□ 1.48
CSNK1E-210ENST00000442216 EPRSP07814 1512 aaKnown RBP24.29■■□□□ 1.48
CSNK1E-210ENST00000442216 HECW1Q76N89 1606 aa24.28■■□□□ 1.48
CSNK1E-210ENST00000442216 LOC105371045A0A1W2PR82 267 aa24.23■■□□□ 1.47
CSNK1E-210ENST00000442216 CEP162Q5TB80 1403 aa24.23■■□□□ 1.47
CSNK1E-210ENST00000442216 TSPOAP1O95153 1857 aa24.23■■□□□ 1.47
CSNK1E-210ENST00000442216 MAP3K4Q9Y6R4 1608 aa24.22■■□□□ 1.47
CSNK1E-210ENST00000442216 ARID3CA6NKF2 412 aa24.21■■□□□ 1.47
CSNK1E-210ENST00000442216 CFAP43Q8NDM7 1665 aa24.2■■□□□ 1.46
CSNK1E-210ENST00000442216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.19■■□□□ 1.46
CSNK1E-210ENST00000442216 HNRNPUL2Q1KMD3 747 aaKnown RBP24.19■■□□□ 1.46
CSNK1E-210ENST00000442216 CASKIN1Q8WXD9 1431 aa24.18■■□□□ 1.46
CSNK1E-210ENST00000442216 PCF11O94913 1555 aaKnown RBP24.17■■□□□ 1.46
CSNK1E-210ENST00000442216 LRRIQ1Q96JM4 1722 aa24.16■■□□□ 1.46
CSNK1E-210ENST00000442216 PPRC1Q5VV67 1664 aaKnown RBP24.16■■□□□ 1.46
CSNK1E-210ENST00000442216 CDK13Q14004 1512 aaKnown RBP24.15■■□□□ 1.46
CSNK1E-210ENST00000442216 FYCO1Q9BQS8 1478 aa24.14■■□□□ 1.46
CSNK1E-210ENST00000442216 PLEKHD1A6NEE1 506 aa24.14■■□□□ 1.45
CSNK1E-210ENST00000442216 KCNH8Q96L42 1107 aa24.14■■□□□ 1.45
CSNK1E-210ENST00000442216 ABCA9Q8IUA7 1624 aa24.13■■□□□ 1.45
CSNK1E-210ENST00000442216 ATP1B4Q9UN42 357 aaPredicted RBP24.12■■□□□ 1.45
CSNK1E-210ENST00000442216 CCDC18Q5T9S5 1454 aa24.11■■□□□ 1.45
CSNK1E-210ENST00000442216 TEX14Q8IWB6 1497 aa24.09■■□□□ 1.45
CSNK1E-210ENST00000442216 CDK11AQ9UQ88 783 aaPredicted RBP24.09■■□□□ 1.45
CSNK1E-210ENST00000442216 CD109Q6YHK3 1445 aa24.08■■□□□ 1.44
CSNK1E-210ENST00000442216 MAGI3Q5TCQ9 1506 aa24.07■■□□□ 1.44
CSNK1E-210ENST00000442216 KDM6BO15054 1643 aa24.01■■□□□ 1.43
CSNK1E-210ENST00000442216 TROQ12816 1431 aaPredicted RBP24■■□□□ 1.43
CSNK1E-210ENST00000442216 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24■■□□□ 1.43
CSNK1E-210ENST00000442216 KIF14Q15058 1648 aa23.96■■□□□ 1.43
CSNK1E-210ENST00000442216 VPS8Q8N3P4 1428 aa23.96■■□□□ 1.43
CSNK1E-210ENST00000442216 TTC37Q6PGP7 1564 aa23.95■■□□□ 1.42
CSNK1E-210ENST00000442216 PHLDB1Q86UU1 1377 aa23.93■■□□□ 1.42
CSNK1E-210ENST00000442216 MYO5CQ9NQX4 1742 aa23.91■■□□□ 1.42
CSNK1E-210ENST00000442216 NEO1Q92859 1461 aa23.91■■□□□ 1.42
CSNK1E-210ENST00000442216 CFAP74Q9C0B2 1584 aa23.9■■□□□ 1.42
CSNK1E-210ENST00000442216 ARAP3Q8WWN8 1544 aa23.88■■□□□ 1.41
CSNK1E-210ENST00000442216 PLCH2O75038 1416 aa23.86■■□□□ 1.41
CSNK1E-210ENST00000442216 COL17A1Q9UMD9 1497 aaPredicted RBP23.86■■□□□ 1.41
CSNK1E-210ENST00000442216 TIAM1Q13009 1591 aa23.82■■□□□ 1.4
CSNK1E-210ENST00000442216 FANCAO15360 1455 aa23.82■■□□□ 1.4
CSNK1E-210ENST00000442216 MAP3K1Q13233 1512 aa23.82■■□□□ 1.4
CSNK1E-210ENST00000442216 EHBP1L1Q8N3D4 1523 aa23.82■■□□□ 1.4
CSNK1E-210ENST00000442216 MTUS2Q5JR59 1369 aa23.81■■□□□ 1.4
CSNK1E-210ENST00000442216 CDC42BPBQ9Y5S2 1711 aa23.8■■□□□ 1.4
CSNK1E-210ENST00000442216 CDC42BPAQ5VT25 1732 aa23.79■■□□□ 1.4
CSNK1E-210ENST00000442216 AKNAQ7Z591 1439 aa23.78■■□□□ 1.4
CSNK1E-210ENST00000442216 PREX2Q70Z35 1606 aa23.78■■□□□ 1.4
CSNK1E-210ENST00000442216 EFCAB2Q5VUJ9 269 aa23.75■■□□□ 1.39
CSNK1E-210ENST00000442216 ARHGAP5Q13017 1502 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms