RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 PRG4Q92954 1404 aaPredicted RBP32.58■■■□□ 2.81
HMGB3P22-201ENST00000442010 CARMIL1Q5VZK9 1371 aa32.58■■■□□ 2.81
HMGB3P22-201ENST00000442010 KIAA0586Q9BVV6 1533 aa32.54■■■□□ 2.8
HMGB3P22-201ENST00000442010 TRHP20396 242 aaPredicted RBP32.48■■■□□ 2.79
HMGB3P22-201ENST00000442010 RAPGEF2Q9Y4G8 1499 aa32.34■■■□□ 2.77
HMGB3P22-201ENST00000442010 IQGAP2Q13576 1575 aa32.3■■■□□ 2.76
HMGB3P22-201ENST00000442010 ADCY10Q96PN6 1610 aa32.22■■■□□ 2.75
HMGB3P22-201ENST00000442010 PRXQ9BXM0 1461 aa32.16■■■□□ 2.74
HMGB3P22-201ENST00000442010 CARMIL2Q6F5E8 1435 aa32.15■■■□□ 2.74
HMGB3P22-201ENST00000442010 KIF13AQ9H1H9 1805 aa32.14■■■□□ 2.74
HMGB3P22-201ENST00000442010 DISP1Q96F81 1524 aa32.14■■■□□ 2.74
HMGB3P22-201ENST00000442010 UGGT2Q9NYU1 1516 aa32.14■■■□□ 2.74
HMGB3P22-201ENST00000442010 CTTNBP2Q8WZ74 1663 aa32.13■■■□□ 2.73
HMGB3P22-201ENST00000442010 PTPRGP23470 1445 aa32.11■■■□□ 2.73
HMGB3P22-201ENST00000442010 TNIKQ9UKE5 1360 aa32.11■■■□□ 2.73
HMGB3P22-201ENST00000442010 MAPKBP1O60336 1514 aa32.08■■■□□ 2.73
HMGB3P22-201ENST00000442010 KIAA0556O60303 1618 aa32.03■■■□□ 2.72
HMGB3P22-201ENST00000442010 NPM1P06748 294 aaKnown RBP eCLIP32.02■■■□□ 2.72
HMGB3P22-201ENST00000442010 ABCC10Q5T3U5 1492 aa31.98■■■□□ 2.71
HMGB3P22-201ENST00000442010 CSRNP3Q8WYN3 585 aa31.95■■■□□ 2.71
HMGB3P22-201ENST00000442010 UHRF1BP1LA0JNW5 1464 aa31.95■■■□□ 2.7
HMGB3P22-201ENST00000442010 TTBK1Q5TCY1 1321 aaPredicted RBP31.95■■■□□ 2.7
HMGB3P22-201ENST00000442010 DIP2BQ9P265 1576 aa31.94■■■□□ 2.7
HMGB3P22-201ENST00000442010 ABCC2Q92887 1545 aa31.93■■■□□ 2.7
HMGB3P22-201ENST00000442010 EEA1Q15075 1411 aa31.92■■■□□ 2.7
HMGB3P22-201ENST00000442010 UACAQ9BZF9 1416 aa31.92■■■□□ 2.7
HMGB3P22-201ENST00000442010 FAM69CQ0P6D2 419 aa31.86■■■□□ 2.69
HMGB3P22-201ENST00000442010 GOLGA3Q08378 1498 aa31.85■■■□□ 2.69
HMGB3P22-201ENST00000442010 KDM5BQ9UGL1 1544 aa31.8■■■□□ 2.68
HMGB3P22-201ENST00000442010 CHIC1Q5VXU3 224 aa31.76■■■□□ 2.67
HMGB3P22-201ENST00000442010 ASXL2Q76L83 1435 aa31.75■■■□□ 2.67
HMGB3P22-201ENST00000442010 ZCCHC11Q5TAX3 1644 aaKnown RBP31.75■■■□□ 2.67
HMGB3P22-201ENST00000442010 PLB1Q6P1J6 1458 aa31.73■■■□□ 2.67
HMGB3P22-201ENST00000442010 ABCA8O94911 1581 aa31.72■■■□□ 2.67
HMGB3P22-201ENST00000442010 TSPOAP1O95153 1857 aa31.72■■■□□ 2.67
HMGB3P22-201ENST00000442010 KIF21BO75037 1637 aa31.69■■■□□ 2.66
HMGB3P22-201ENST00000442010 GLI2P10070 1586 aa31.68■■■□□ 2.66
HMGB3P22-201ENST00000442010 SAMD9Q5K651 1589 aa31.68■■■□□ 2.66
HMGB3P22-201ENST00000442010 FAM9AQ8IZU1 332 aaPredicted RBP31.68■■■□□ 2.66
HMGB3P22-201ENST00000442010 PPRC1Q5VV67 1664 aaKnown RBP31.6■■■□□ 2.65
HMGB3P22-201ENST00000442010 EPRSP07814 1512 aaKnown RBP31.59■■■□□ 2.65
HMGB3P22-201ENST00000442010 P3H3Q8IVL6 736 aa31.56■■■□□ 2.64
HMGB3P22-201ENST00000442010 MAP3K4Q9Y6R4 1608 aa31.53■■■□□ 2.64
HMGB3P22-201ENST00000442010 WDR7Q9Y4E6 1490 aa31.52■■■□□ 2.64
HMGB3P22-201ENST00000442010 KDM6BO15054 1643 aa31.5■■■□□ 2.63
HMGB3P22-201ENST00000442010 RAPGEF6Q8TEU7 1601 aa31.45■■■□□ 2.62
HMGB3P22-201ENST00000442010 ATP10BO94823 1461 aa31.42■■■□□ 2.62
HMGB3P22-201ENST00000442010 EFCAB5A4FU69 1503 aa31.41■■■□□ 2.62
HMGB3P22-201ENST00000442010 FHOD3Q2V2M9 1422 aa31.41■■■□□ 2.62
HMGB3P22-201ENST00000442010 RANGAP1P46060 587 aaPredicted RBP31.39■■■□□ 2.62
HMGB3P22-201ENST00000442010 CFAP43Q8NDM7 1665 aa31.36■■■□□ 2.61
HMGB3P22-201ENST00000442010 TEX14Q8IWB6 1497 aa31.33■■■□□ 2.61
HMGB3P22-201ENST00000442010 NUP153P49790 1475 aaKnown RBP31.32■■■□□ 2.6
HMGB3P22-201ENST00000442010 ARID3CA6NKF2 412 aa31.31■■■□□ 2.6
HMGB3P22-201ENST00000442010 KCNH8Q96L42 1107 aa31.3■■■□□ 2.6
HMGB3P22-201ENST00000442010 COL17A1Q9UMD9 1497 aaPredicted RBP31.29■■■□□ 2.6
HMGB3P22-201ENST00000442010 UBTFP17480 764 aaKnown RBP31.29■■■□□ 2.6
HMGB3P22-201ENST00000442010 EHMT2Q96KQ7 1210 aa31.28■■■□□ 2.6
HMGB3P22-201ENST00000442010 MAGI3Q5TCQ9 1506 aa31.28■■■□□ 2.6
HMGB3P22-201ENST00000442010 CD109Q6YHK3 1445 aa31.26■■■□□ 2.6
HMGB3P22-201ENST00000442010 ABCA9Q8IUA7 1624 aa31.21■■■□□ 2.59
HMGB3P22-201ENST00000442010 ARHGAP35Q9NRY4 1499 aa31.21■■■□□ 2.59
HMGB3P22-201ENST00000442010 AEBP2Q6ZN18 517 aaPredicted RBP31.14■■■□□ 2.58
HMGB3P22-201ENST00000442010 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.12■■■□□ 2.57
HMGB3P22-201ENST00000442010 HNRNPUL2Q1KMD3 747 aaKnown RBP31.12■■■□□ 2.57
HMGB3P22-201ENST00000442010 FMN1Q68DA7 1419 aa31.08■■■□□ 2.57
HMGB3P22-201ENST00000442010 CDK13Q14004 1512 aaKnown RBP31.03■■■□□ 2.56
HMGB3P22-201ENST00000442010 PLEKHD1A6NEE1 506 aa31.03■■■□□ 2.56
HMGB3P22-201ENST00000442010 ARAP3Q8WWN8 1544 aa31.03■■■□□ 2.56
HMGB3P22-201ENST00000442010 HECW1Q76N89 1606 aa31.02■■■□□ 2.56
HMGB3P22-201ENST00000442010 KDM4FA0A1W2PPD8 638 aa31■■■□□ 2.55
HMGB3P22-201ENST00000442010 LRRIQ1Q96JM4 1722 aa30.97■■■□□ 2.55
HMGB3P22-201ENST00000442010 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.97■■■□□ 2.55
HMGB3P22-201ENST00000442010 PHLDB1Q86UU1 1377 aa30.96■■■□□ 2.55
HMGB3P22-201ENST00000442010 NEO1Q92859 1461 aa30.95■■■□□ 2.55
HMGB3P22-201ENST00000442010 TTC37Q6PGP7 1564 aa30.92■■■□□ 2.54
HMGB3P22-201ENST00000442010 ATP1B4Q9UN42 357 aaPredicted RBP30.86■■■□□ 2.53
HMGB3P22-201ENST00000442010 PCF11O94913 1555 aaKnown RBP30.84■■■□□ 2.53
HMGB3P22-201ENST00000442010 ADGRL1O94910 1474 aa30.84■■■□□ 2.53
HMGB3P22-201ENST00000442010 FRMPD1Q5SYB0 1578 aa30.83■■■□□ 2.53
HMGB3P22-201ENST00000442010 CASKIN1Q8WXD9 1431 aa30.82■■■□□ 2.52
HMGB3P22-201ENST00000442010 CFAP74Q9C0B2 1584 aa30.81■■■□□ 2.52
HMGB3P22-201ENST00000442010 CLIP1P30622 1438 aa30.81■■■□□ 2.52
HMGB3P22-201ENST00000442010 FANCAO15360 1455 aa30.79■■■□□ 2.52
HMGB3P22-201ENST00000442010 KIF14Q15058 1648 aa30.78■■■□□ 2.52
HMGB3P22-201ENST00000442010 RAPGEF3O95398 923 aa30.78■■■□□ 2.52
HMGB3P22-201ENST00000442010 AKNAQ7Z591 1439 aa30.78■■■□□ 2.52
HMGB3P22-201ENST00000442010 TROQ12816 1431 aaPredicted RBP30.77■■■□□ 2.52
HMGB3P22-201ENST00000442010 RICTORQ6R327 1708 aa30.77■■■□□ 2.52
HMGB3P22-201ENST00000442010 CDK11AQ9UQ88 783 aaPredicted RBP30.77■■■□□ 2.52
HMGB3P22-201ENST00000442010 PLCH2O75038 1416 aa30.75■■■□□ 2.51
HMGB3P22-201ENST00000442010 MYO5CQ9NQX4 1742 aa30.75■■■□□ 2.51
HMGB3P22-201ENST00000442010 CCDC18Q5T9S5 1454 aa30.73■■■□□ 2.51
HMGB3P22-201ENST00000442010 FYCO1Q9BQS8 1478 aa30.72■■■□□ 2.51
HMGB3P22-201ENST00000442010 DENND4BO75064 1496 aaPredicted RBP30.7■■■□□ 2.51
HMGB3P22-201ENST00000442010 ZMYM4Q5VZL5 1548 aa30.63■■■□□ 2.49
HMGB3P22-201ENST00000442010 CDC42BPBQ9Y5S2 1711 aa30.61■■■□□ 2.49
HMGB3P22-201ENST00000442010 ARHGEF40Q8TER5 1519 aa30.6■■■□□ 2.49
HMGB3P22-201ENST00000442010 CEP162Q5TB80 1403 aa30.58■■■□□ 2.49
HMGB3P22-201ENST00000442010 SCAPERQ9BY12 1400 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms