RNA–Protein interactions for RNA: ENST00000441248.5

CXorf40A-209, Transcript of chromosome X open reading frame 40A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXorf40A, Length 2,411 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf40A-209ENST00000441248 NBR1Q14596 966 aa21.81■■□□□ 1.08
CXorf40A-209ENST00000441248 CCDC136Q96JN2 1154 aa21.81■■□□□ 1.08
CXorf40A-209ENST00000441248 IRX6P78412 446 aaPredicted RBP21.8■■□□□ 1.08
CXorf40A-209ENST00000441248 NOP58Q9Y2X3 529 aaKnown RBP21.8■■□□□ 1.08
CXorf40A-209ENST00000441248 UBE2Q2Q8WVN8 375 aa21.77■■□□□ 1.08
CXorf40A-209ENST00000441248 PAK3O75914 559 aaPredicted RBP21.76■■□□□ 1.07
CXorf40A-209ENST00000441248 ANP32CO43423 234 aa21.75■■□□□ 1.07
CXorf40A-209ENST00000441248 MAPKBP1O60336 1514 aa21.75■■□□□ 1.07
CXorf40A-209ENST00000441248 RRBP1Q9P2E9 1410 aaKnown RBP21.74■■□□□ 1.07
CXorf40A-209ENST00000441248 WDR97A6NE52 1622 aa21.74■■□□□ 1.07
CXorf40A-209ENST00000441248 RANGAP1P46060 587 aaPredicted RBP21.73■■□□□ 1.07
CXorf40A-209ENST00000441248 IL27Q8NEV9 243 aa21.72■■□□□ 1.07
CXorf40A-209ENST00000441248 TOP2BQ02880 1626 aa21.7■■□□□ 1.06
CXorf40A-209ENST00000441248 PPP4R2Q9NY27 417 aa21.7■■□□□ 1.06
CXorf40A-209ENST00000441248 KANK4Q5T7N3 995 aaPredicted RBP21.68■■□□□ 1.06
CXorf40A-209ENST00000441248 CFTRP13569 1480 aa21.66■■□□□ 1.06
CXorf40A-209ENST00000441248 RAPGEF2Q9Y4G8 1499 aa21.66■■□□□ 1.06
CXorf40A-209ENST00000441248 CUX1P39880 1505 aa21.64■■□□□ 1.05
CXorf40A-209ENST00000441248 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.62■■□□□ 1.05
CXorf40A-209ENST00000441248 BIVM-ERCC5R4GMW8 1640 aa21.62■■□□□ 1.05
CXorf40A-209ENST00000441248 RTN4Q9NQC3 1192 aaKnown RBP21.61■■□□□ 1.05
CXorf40A-209ENST00000441248 RAB3GAP2Q9H2M9 1393 aa21.61■■□□□ 1.05
CXorf40A-209ENST00000441248 HNRNPUQ00839 825 aaKnown RBP eCLIP21.6■■□□□ 1.05
CXorf40A-209ENST00000441248 HIRIP3Q9BW71 556 aaPredicted RBP21.6■■□□□ 1.05
CXorf40A-209ENST00000441248 CCNB3Q8WWL7 1395 aa21.58■■□□□ 1.05
CXorf40A-209ENST00000441248 RTL5Q5HYW3 569 aaPredicted RBP21.58■■□□□ 1.04
CXorf40A-209ENST00000441248 B4GALNT3Q6L9W6 998 aa21.56■■□□□ 1.04
CXorf40A-209ENST00000441248 SIN3AQ96ST3 1273 aa21.56■■□□□ 1.04
CXorf40A-209ENST00000441248 NESP48681 1621 aa21.54■■□□□ 1.04
CXorf40A-209ENST00000441248 ARAP1Q96P48 1450 aa21.54■■□□□ 1.04
CXorf40A-209ENST00000441248 CADPSQ9ULU8 1353 aa21.53■■□□□ 1.04
CXorf40A-209ENST00000441248 LAMC3Q9Y6N6 1575 aa21.52■■□□□ 1.03
CXorf40A-209ENST00000441248 IPO9Q96P70 1041 aaKnown RBP21.51■■□□□ 1.03
CXorf40A-209ENST00000441248 WASHC2AQ641Q2 1341 aa21.49■■□□□ 1.03
CXorf40A-209ENST00000441248 TIMELESSQ9UNS1 1208 aa21.48■■□□□ 1.03
CXorf40A-209ENST00000441248 PRDM2Q13029 1718 aa21.45■■□□□ 1.02
CXorf40A-209ENST00000441248 ZBTB47Q9UFB7 747 aaPredicted RBP21.43■■□□□ 1.02
CXorf40A-209ENST00000441248 ANP32AP39687 249 aaKnown RBP21.43■■□□□ 1.02
CXorf40A-209ENST00000441248 SETD5Q9C0A6 1442 aa21.42■■□□□ 1.02
CXorf40A-209ENST00000441248 ERICH3Q5RHP9 1530 aa21.4■■□□□ 1.02
CXorf40A-209ENST00000441248 KIF27Q86VH2 1401 aa21.4■■□□□ 1.02
CXorf40A-209ENST00000441248 C11orf95C9JLR9 678 aaPredicted RBP21.39■■□□□ 1.02
CXorf40A-209ENST00000441248 PRXQ9BXM0 1461 aa21.36■■□□□ 1.01
CXorf40A-209ENST00000441248 FANCD2Q9BXW9 1451 aa21.36■■□□□ 1.01
CXorf40A-209ENST00000441248 WASHC2CQ9Y4E1 1318 aa21.35■■□□□ 1.01
CXorf40A-209ENST00000441248 ERCC6Q03468 1493 aa21.35■■□□□ 1.01
CXorf40A-209ENST00000441248 FGD5Q6ZNL6 1462 aa21.34■■□□□ 1.01
CXorf40A-209ENST00000441248 PDS5BQ9NTI5 1447 aa21.33■■□□□ 1.01
CXorf40A-209ENST00000441248 KIF21AQ7Z4S6 1674 aa21.33■■□□□ 1
CXorf40A-209ENST00000441248 USP35Q9P2H5 1018 aa21.28■■□□□ 1
CXorf40A-209ENST00000441248 CCDC184Q52MB2 194 aa21.25■□□□□ 0.99
CXorf40A-209ENST00000441248 NEFMP07197 916 aa21.25■□□□□ 0.99
CXorf40A-209ENST00000441248 ZBED9Q6R2W3 1325 aa21.23■□□□□ 0.99
CXorf40A-209ENST00000441248 RAD54L2Q9Y4B4 1467 aa21.23■□□□□ 0.99
CXorf40A-209ENST00000441248 EIF5BO60841 1220 aaKnown RBP21.23■□□□□ 0.99
CXorf40A-209ENST00000441248 BRPF3Q9ULD4 1205 aa21.23■□□□□ 0.99
CXorf40A-209ENST00000441248 IGF1RP08069 1367 aa21.22■□□□□ 0.99
CXorf40A-209ENST00000441248 THOC2Q8NI27 1593 aaKnown RBP21.19■□□□□ 0.98
CXorf40A-209ENST00000441248 LAS1LQ9Y4W2 734 aaKnown RBP21.19■□□□□ 0.98
CXorf40A-209ENST00000441248 TOPBP1Q92547 1522 aa21.16■□□□□ 0.98
CXorf40A-209ENST00000441248 TONSLQ96HA7 1378 aa21.16■□□□□ 0.98
CXorf40A-209ENST00000441248 PKNOX2Q96KN3 472 aa21.15■□□□□ 0.98
CXorf40A-209ENST00000441248 CARMIL1Q5VZK9 1371 aa21.14■□□□□ 0.97
CXorf40A-209ENST00000441248 DNMBPQ6XZF7 1577 aa21.14■□□□□ 0.97
CXorf40A-209ENST00000441248 FHAD1B1AJZ9 1412 aa21.14■□□□□ 0.97
CXorf40A-209ENST00000441248 ARHGAP35Q9NRY4 1499 aa21.13■□□□□ 0.97
CXorf40A-209ENST00000441248 FAM9BQ8IZU0 186 aa21.13■□□□□ 0.97
CXorf40A-209ENST00000441248 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
CXorf40A-209ENST00000441248 MRC2Q9UBG0 1479 aa21.12■□□□□ 0.97
CXorf40A-209ENST00000441248 AKNAQ7Z591 1439 aa21.11■□□□□ 0.97
CXorf40A-209ENST00000441248 RNF123Q5XPI4 1314 aa21.11■□□□□ 0.97
CXorf40A-209ENST00000441248 PHLDB1Q86UU1 1377 aa21.11■□□□□ 0.97
CXorf40A-209ENST00000441248 PPM1GO15355 546 aaPredicted RBP21.09■□□□□ 0.97
CXorf40A-209ENST00000441248 TIAM1Q13009 1591 aa21.09■□□□□ 0.97
CXorf40A-209ENST00000441248 URB2Q14146 1524 aaKnown RBP21.08■□□□□ 0.97
CXorf40A-209ENST00000441248 NPM2Q86SE8 214 aaKnown RBP21.08■□□□□ 0.96
CXorf40A-209ENST00000441248 SMG6Q86US8 1419 aaKnown RBP21.08■□□□□ 0.96
CXorf40A-209ENST00000441248 FAM50AQ14320 339 aaKnown RBP21.07■□□□□ 0.96
CXorf40A-209ENST00000441248 GSE1Q14687 1217 aa21.07■□□□□ 0.96
CXorf40A-209ENST00000441248 NCOA2Q15596 1464 aa21.07■□□□□ 0.96
CXorf40A-209ENST00000441248 MAP3K1Q13233 1512 aa21.07■□□□□ 0.96
CXorf40A-209ENST00000441248 P3H3Q8IVL6 736 aa21.06■□□□□ 0.96
CXorf40A-209ENST00000441248 WDR62O43379 1518 aa21.06■□□□□ 0.96
CXorf40A-209ENST00000441248 PRKRIP1Q9H875 184 aaPredicted RBP21.05■□□□□ 0.96
CXorf40A-209ENST00000441248 MRS2Q9HD23 443 aa21.05■□□□□ 0.96
CXorf40A-209ENST00000441248 CNTLNQ9NXG0 1405 aa21.05■□□□□ 0.96
CXorf40A-209ENST00000441248 KDM5BQ9UGL1 1544 aa21.04■□□□□ 0.96
CXorf40A-209ENST00000441248 RSPH6AQ9H0K4 717 aa21.04■□□□□ 0.96
CXorf40A-209ENST00000441248 LRRC9Q6ZRR7 1453 aa21.02■□□□□ 0.96
CXorf40A-209ENST00000441248 HSPA5P11021 654 aaKnown RBP21.02■□□□□ 0.96
CXorf40A-209ENST00000441248 TDRD9Q8NDG6 1382 aaKnown RBP21.01■□□□□ 0.95
CXorf40A-209ENST00000441248 ABCA10Q8WWZ4 1543 aa21■□□□□ 0.95
CXorf40A-209ENST00000441248 NUDCQ9Y266 331 aa20.98■□□□□ 0.95
CXorf40A-209ENST00000441248 PDE4AP27815 886 aa20.97■□□□□ 0.95
CXorf40A-209ENST00000441248 FRAT1Q92837 279 aaPredicted RBP20.96■□□□□ 0.95
CXorf40A-209ENST00000441248 TCERG1O14776 1098 aaKnown RBP20.95■□□□□ 0.94
CXorf40A-209ENST00000441248 ATP1B4Q9UN42 357 aaPredicted RBP20.94■□□□□ 0.94
CXorf40A-209ENST00000441248 BACH2Q9BYV9 841 aa20.94■□□□□ 0.94
CXorf40A-209ENST00000441248 FAM43AQ8N2R8 423 aa20.93■□□□□ 0.94
CXorf40A-209ENST00000441248 NFKBIBQ15653 356 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms