RNA–Protein interactions for RNA: ENST00000441012.6

NR1H3-211, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1H3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-211ENST00000441012 PRXQ9BXM0 1461 aa23.41■■□□□ 1.34
NR1H3-211ENST00000441012 SYNJ2O15056 1496 aa23.41■■□□□ 1.34
NR1H3-211ENST00000441012 PPARGC1BQ86YN6 1023 aaKnown RBP23.41■■□□□ 1.34
NR1H3-211ENST00000441012 ABCA10Q8WWZ4 1543 aa23.39■■□□□ 1.34
NR1H3-211ENST00000441012 GAPVD1Q14C86 1478 aa23.39■■□□□ 1.34
NR1H3-211ENST00000441012 RAPGEF2Q9Y4G8 1499 aa23.39■■□□□ 1.34
NR1H3-211ENST00000441012 CLIP1P30622 1438 aa23.39■■□□□ 1.34
NR1H3-211ENST00000441012 CHMP7Q8WUX9 453 aaPredicted RBP23.39■■□□□ 1.33
NR1H3-211ENST00000441012 KIF27Q86VH2 1401 aa23.36■■□□□ 1.33
NR1H3-211ENST00000441012 VPS8Q8N3P4 1428 aa23.32■■□□□ 1.32
NR1H3-211ENST00000441012 ADAMTS12P58397 1594 aa23.24■■□□□ 1.31
NR1H3-211ENST00000441012 TRHP20396 242 aaPredicted RBP23.19■■□□□ 1.3
NR1H3-211ENST00000441012 GRIN2AQ12879 1464 aa23.19■■□□□ 1.3
NR1H3-211ENST00000441012 CEP170Q5SW79 1584 aa23.15■■□□□ 1.3
NR1H3-211ENST00000441012 ERCC6L2Q5T890 1561 aa23.11■■□□□ 1.29
NR1H3-211ENST00000441012 NUP160Q12769 1436 aa23.1■■□□□ 1.29
NR1H3-211ENST00000441012 IGF1RP08069 1367 aa23.09■■□□□ 1.29
NR1H3-211ENST00000441012 FHAD1B1AJZ9 1412 aa23.08■■□□□ 1.29
NR1H3-211ENST00000441012 SHROOM2Q13796 1616 aa23.08■■□□□ 1.29
NR1H3-211ENST00000441012 APLP2Q06481 763 aa23.06■■□□□ 1.28
NR1H3-211ENST00000441012 CCER1Q8TC90 406 aaPredicted RBP23.04■■□□□ 1.28
NR1H3-211ENST00000441012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.99■■□□□ 1.27
NR1H3-211ENST00000441012 CARMIL1Q5VZK9 1371 aa22.97■■□□□ 1.27
NR1H3-211ENST00000441012 ARHGAP35Q9NRY4 1499 aa22.94■■□□□ 1.26
NR1H3-211ENST00000441012 TTBK1Q5TCY1 1321 aaPredicted RBP22.9■■□□□ 1.26
NR1H3-211ENST00000441012 MAP3K1Q13233 1512 aa22.89■■□□□ 1.25
NR1H3-211ENST00000441012 PRG4Q92954 1404 aaPredicted RBP22.85■■□□□ 1.25
NR1H3-211ENST00000441012 KIF13AQ9H1H9 1805 aa22.84■■□□□ 1.25
NR1H3-211ENST00000441012 CUL7Q14999 1698 aa22.83■■□□□ 1.25
NR1H3-211ENST00000441012 JPH4Q96JJ6 628 aa22.79■■□□□ 1.24
NR1H3-211ENST00000441012 RANGAP1P46060 587 aaPredicted RBP22.79■■□□□ 1.24
NR1H3-211ENST00000441012 RRBP1Q9P2E9 1410 aaKnown RBP22.78■■□□□ 1.24
NR1H3-211ENST00000441012 EFCAB5A4FU69 1503 aa22.72■■□□□ 1.23
NR1H3-211ENST00000441012 KIAA0586Q9BVV6 1533 aa22.7■■□□□ 1.23
NR1H3-211ENST00000441012 CLSPNQ9HAW4 1339 aa22.7■■□□□ 1.22
NR1H3-211ENST00000441012 KANK4Q5T7N3 995 aaPredicted RBP22.7■■□□□ 1.22
NR1H3-211ENST00000441012 ADCY10Q96PN6 1610 aa22.69■■□□□ 1.22
NR1H3-211ENST00000441012 HNRNPUL2Q1KMD3 747 aaKnown RBP22.68■■□□□ 1.22
NR1H3-211ENST00000441012 TIAM1Q13009 1591 aa22.68■■□□□ 1.22
NR1H3-211ENST00000441012 MAPKBP1O60336 1514 aa22.63■■□□□ 1.21
NR1H3-211ENST00000441012 CTTNBP2Q8WZ74 1663 aa22.62■■□□□ 1.21
NR1H3-211ENST00000441012 CCNB3Q8WWL7 1395 aa22.61■■□□□ 1.21
NR1H3-211ENST00000441012 DIP2BQ9P265 1576 aa22.59■■□□□ 1.21
NR1H3-211ENST00000441012 LRRC9Q6ZRR7 1453 aa22.59■■□□□ 1.21
NR1H3-211ENST00000441012 ABCC10Q5T3U5 1492 aa22.58■■□□□ 1.2
NR1H3-211ENST00000441012 FYCO1Q9BQS8 1478 aa22.58■■□□□ 1.2
NR1H3-211ENST00000441012 CFAP43Q8NDM7 1665 aa22.58■■□□□ 1.2
NR1H3-211ENST00000441012 CASKIN1Q8WXD9 1431 aa22.56■■□□□ 1.2
NR1H3-211ENST00000441012 IQGAP2Q13576 1575 aa22.55■■□□□ 1.2
NR1H3-211ENST00000441012 NPM1P06748 294 aaKnown RBP eCLIP22.53■■□□□ 1.2
NR1H3-211ENST00000441012 FMN1Q68DA7 1419 aa22.52■■□□□ 1.2
NR1H3-211ENST00000441012 TSPOAP1O95153 1857 aa22.52■■□□□ 1.19
NR1H3-211ENST00000441012 PCF11O94913 1555 aaKnown RBP22.51■■□□□ 1.19
NR1H3-211ENST00000441012 FAM69CQ0P6D2 419 aa22.5■■□□□ 1.19
NR1H3-211ENST00000441012 AEBP2Q6ZN18 517 aaPredicted RBP22.49■■□□□ 1.19
NR1H3-211ENST00000441012 SAMD9Q5K651 1589 aa22.48■■□□□ 1.19
NR1H3-211ENST00000441012 DHX57Q6P158 1386 aaKnown RBP22.47■■□□□ 1.19
NR1H3-211ENST00000441012 PTPRGP23470 1445 aa22.46■■□□□ 1.19
NR1H3-211ENST00000441012 ZNF316A6NFI3 1004 aaPredicted RBP22.46■■□□□ 1.19
NR1H3-211ENST00000441012 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.46■■□□□ 1.19
NR1H3-211ENST00000441012 CARMIL2Q6F5E8 1435 aa22.46■■□□□ 1.19
NR1H3-211ENST00000441012 FHOD3Q2V2M9 1422 aa22.45■■□□□ 1.18
NR1H3-211ENST00000441012 DIEXFQ68CQ4 756 aaKnown RBP22.42■■□□□ 1.18
NR1H3-211ENST00000441012 DISP1Q96F81 1524 aa22.42■■□□□ 1.18
NR1H3-211ENST00000441012 ABCC2Q92887 1545 aa22.4■■□□□ 1.18
NR1H3-211ENST00000441012 KDM6BO15054 1643 aa22.4■■□□□ 1.18
NR1H3-211ENST00000441012 UGGT2Q9NYU1 1516 aa22.38■■□□□ 1.17
NR1H3-211ENST00000441012 PHLDB1Q86UU1 1377 aa22.37■■□□□ 1.17
NR1H3-211ENST00000441012 KIAA0556O60303 1618 aa22.37■■□□□ 1.17
NR1H3-211ENST00000441012 UHRF1BP1LA0JNW5 1464 aa22.35■■□□□ 1.17
NR1H3-211ENST00000441012 PPRC1Q5VV67 1664 aaKnown RBP22.34■■□□□ 1.17
NR1H3-211ENST00000441012 UACAQ9BZF9 1416 aa22.32■■□□□ 1.16
NR1H3-211ENST00000441012 P3H3Q8IVL6 736 aa22.32■■□□□ 1.16
NR1H3-211ENST00000441012 ASXL2Q76L83 1435 aa22.32■■□□□ 1.16
NR1H3-211ENST00000441012 GLI2P10070 1586 aa22.3■■□□□ 1.16
NR1H3-211ENST00000441012 ZCCHC11Q5TAX3 1644 aaKnown RBP22.3■■□□□ 1.16
NR1H3-211ENST00000441012 SETD5Q9C0A6 1442 aa22.3■■□□□ 1.16
NR1H3-211ENST00000441012 PLB1Q6P1J6 1458 aa22.29■■□□□ 1.16
NR1H3-211ENST00000441012 KDM5BQ9UGL1 1544 aa22.26■■□□□ 1.15
NR1H3-211ENST00000441012 RAB3GAP2Q9H2M9 1393 aa22.26■■□□□ 1.15
NR1H3-211ENST00000441012 CCDC18Q5T9S5 1454 aa22.23■■□□□ 1.15
NR1H3-211ENST00000441012 MAP3K4Q9Y6R4 1608 aa22.23■■□□□ 1.15
NR1H3-211ENST00000441012 EHBP1L1Q8N3D4 1523 aa22.21■■□□□ 1.15
NR1H3-211ENST00000441012 FGD6Q6ZV73 1430 aa22.21■■□□□ 1.15
NR1H3-211ENST00000441012 EPRSP07814 1512 aaKnown RBP22.2■■□□□ 1.14
NR1H3-211ENST00000441012 MTUS2Q5JR59 1369 aa22.2■■□□□ 1.14
NR1H3-211ENST00000441012 ATP1B4Q9UN42 357 aaPredicted RBP22.18■■□□□ 1.14
NR1H3-211ENST00000441012 HECW1Q76N89 1606 aa22.16■■□□□ 1.14
NR1H3-211ENST00000441012 LRRIQ1Q96JM4 1722 aa22.15■■□□□ 1.14
NR1H3-211ENST00000441012 FAM50AQ14320 339 aaKnown RBP22.14■■□□□ 1.14
NR1H3-211ENST00000441012 SUPT6HQ7KZ85 1726 aaKnown RBP22.14■■□□□ 1.14
NR1H3-211ENST00000441012 ABCA8O94911 1581 aa22.14■■□□□ 1.13
NR1H3-211ENST00000441012 MYOM3Q5VTT5 1437 aa22.13■■□□□ 1.13
NR1H3-211ENST00000441012 ITGAEP38570 1179 aa22.13■■□□□ 1.13
NR1H3-211ENST00000441012 TIMELESSQ9UNS1 1208 aa22.13■■□□□ 1.13
NR1H3-211ENST00000441012 NCOA2Q15596 1464 aa22.12■■□□□ 1.13
NR1H3-211ENST00000441012 WDR7Q9Y4E6 1490 aa22.11■■□□□ 1.13
NR1H3-211ENST00000441012 TEX14Q8IWB6 1497 aa22.08■■□□□ 1.12
NR1H3-211ENST00000441012 KDM4FA0A1W2PPD8 638 aa22.07■■□□□ 1.12
NR1H3-211ENST00000441012 CENPBP07199 599 aaPredicted RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms