RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 UBTFP17480 764 aaKnown RBP24.36■■□□□ 1.49
PLOD3-205ENST00000440925 CLASP1Q7Z460 1538 aa24.35■■□□□ 1.49
PLOD3-205ENST00000440925 KIAA0586Q9BVV6 1533 aa24.35■■□□□ 1.49
PLOD3-205ENST00000440925 JPH4Q96JJ6 628 aa24.32■■□□□ 1.48
PLOD3-205ENST00000440925 TNIKQ9UKE5 1360 aa24.28■■□□□ 1.48
PLOD3-205ENST00000440925 DNAJC5Q9H3Z4 198 aa24.21■■□□□ 1.47
PLOD3-205ENST00000440925 IQGAP2Q13576 1575 aa24.2■■□□□ 1.47
PLOD3-205ENST00000440925 RANGAP1P46060 587 aaPredicted RBP24.2■■□□□ 1.46
PLOD3-205ENST00000440925 SHROOM2Q13796 1616 aa24.2■■□□□ 1.46
PLOD3-205ENST00000440925 CTTNBP2Q8WZ74 1663 aa24.19■■□□□ 1.46
PLOD3-205ENST00000440925 ERCC6L2Q5T890 1561 aa24.19■■□□□ 1.46
PLOD3-205ENST00000440925 UGGT2Q9NYU1 1516 aa24.16■■□□□ 1.46
PLOD3-205ENST00000440925 PRG4Q92954 1404 aaPredicted RBP24.16■■□□□ 1.46
PLOD3-205ENST00000440925 DISP1Q96F81 1524 aa24.15■■□□□ 1.46
PLOD3-205ENST00000440925 P3H3Q8IVL6 736 aa24.12■■□□□ 1.45
PLOD3-205ENST00000440925 ARHGAP35Q9NRY4 1499 aa24.07■■□□□ 1.44
PLOD3-205ENST00000440925 ARHGEF11O15085 1522 aa24.04■■□□□ 1.44
PLOD3-205ENST00000440925 SAMD9Q5K651 1589 aa24.03■■□□□ 1.44
PLOD3-205ENST00000440925 CEP162Q5TB80 1403 aa24.03■■□□□ 1.44
PLOD3-205ENST00000440925 CLIP1P30622 1438 aa24.01■■□□□ 1.43
PLOD3-205ENST00000440925 KIAA0556O60303 1618 aa23.99■■□□□ 1.43
PLOD3-205ENST00000440925 RIMBP3CA6NJZ7 1639 aa23.99■■□□□ 1.43
PLOD3-205ENST00000440925 RIMBP3BA6NNM3 1639 aa23.99■■□□□ 1.43
PLOD3-205ENST00000440925 RIMBP3Q9UFD9 1639 aa23.99■■□□□ 1.43
PLOD3-205ENST00000440925 CARMIL2Q6F5E8 1435 aa23.98■■□□□ 1.43
PLOD3-205ENST00000440925 FHOD3Q2V2M9 1422 aa23.97■■□□□ 1.43
PLOD3-205ENST00000440925 ARAP1Q96P48 1450 aa23.96■■□□□ 1.43
PLOD3-205ENST00000440925 TTBK1Q5TCY1 1321 aaPredicted RBP23.94■■□□□ 1.42
PLOD3-205ENST00000440925 EFCAB5A4FU69 1503 aa23.93■■□□□ 1.42
PLOD3-205ENST00000440925 PTPRGP23470 1445 aa23.93■■□□□ 1.42
PLOD3-205ENST00000440925 CYB5RLQ6IPT4 315 aa23.9■■□□□ 1.42
PLOD3-205ENST00000440925 PLB1Q6P1J6 1458 aa23.81■■□□□ 1.4
PLOD3-205ENST00000440925 UACAQ9BZF9 1416 aa23.77■■□□□ 1.4
PLOD3-205ENST00000440925 ABCA8O94911 1581 aa23.77■■□□□ 1.4
PLOD3-205ENST00000440925 FMN1Q68DA7 1419 aa23.73■■□□□ 1.39
PLOD3-205ENST00000440925 UHRF1BP1LA0JNW5 1464 aa23.71■■□□□ 1.39
PLOD3-205ENST00000440925 ADCY10Q96PN6 1610 aa23.7■■□□□ 1.38
PLOD3-205ENST00000440925 VPS8Q8N3P4 1428 aa23.69■■□□□ 1.38
PLOD3-205ENST00000440925 NUP153P49790 1475 aaKnown RBP23.68■■□□□ 1.38
PLOD3-205ENST00000440925 CASKIN1Q8WXD9 1431 aa23.68■■□□□ 1.38
PLOD3-205ENST00000440925 ARID3CA6NKF2 412 aa23.67■■□□□ 1.38
PLOD3-205ENST00000440925 ABCC2Q92887 1545 aa23.66■■□□□ 1.38
PLOD3-205ENST00000440925 RAPGEF6Q8TEU7 1601 aa23.66■■□□□ 1.38
PLOD3-205ENST00000440925 ATP10BO94823 1461 aa23.65■■□□□ 1.38
PLOD3-205ENST00000440925 ATP1B4Q9UN42 357 aaPredicted RBP23.64■■□□□ 1.37
PLOD3-205ENST00000440925 PCF11O94913 1555 aaKnown RBP23.63■■□□□ 1.37
PLOD3-205ENST00000440925 KDM5BQ9UGL1 1544 aa23.61■■□□□ 1.37
PLOD3-205ENST00000440925 LRRIQ1Q96JM4 1722 aa23.59■■□□□ 1.37
PLOD3-205ENST00000440925 FYCO1Q9BQS8 1478 aa23.57■■□□□ 1.36
PLOD3-205ENST00000440925 EPRSP07814 1512 aaKnown RBP23.57■■□□□ 1.36
PLOD3-205ENST00000440925 CDK13Q14004 1512 aaKnown RBP23.55■■□□□ 1.36
PLOD3-205ENST00000440925 KANK4Q5T7N3 995 aaPredicted RBP23.51■■□□□ 1.35
PLOD3-205ENST00000440925 ZCCHC11Q5TAX3 1644 aaKnown RBP23.51■■□□□ 1.35
PLOD3-205ENST00000440925 HECW1Q76N89 1606 aa23.51■■□□□ 1.35
PLOD3-205ENST00000440925 NPM1P06748 294 aaKnown RBP eCLIP23.5■■□□□ 1.35
PLOD3-205ENST00000440925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.47■■□□□ 1.35
PLOD3-205ENST00000440925 HNRNPUL2Q1KMD3 747 aaKnown RBP23.47■■□□□ 1.35
PLOD3-205ENST00000440925 MAGI3Q5TCQ9 1506 aa23.47■■□□□ 1.35
PLOD3-205ENST00000440925 ASXL2Q76L83 1435 aa23.44■■□□□ 1.34
PLOD3-205ENST00000440925 PLEKHD1A6NEE1 506 aa23.42■■□□□ 1.34
PLOD3-205ENST00000440925 MAP3K1Q13233 1512 aa23.42■■□□□ 1.34
PLOD3-205ENST00000440925 CCDC18Q5T9S5 1454 aa23.41■■□□□ 1.34
PLOD3-205ENST00000440925 TIAM1Q13009 1591 aa23.4■■□□□ 1.34
PLOD3-205ENST00000440925 PPARGC1BQ86YN6 1023 aaKnown RBP23.4■■□□□ 1.34
PLOD3-205ENST00000440925 KCNH8Q96L42 1107 aa23.39■■□□□ 1.33
PLOD3-205ENST00000440925 MAPKBP1O60336 1514 aa23.38■■□□□ 1.33
PLOD3-205ENST00000440925 LRRC9Q6ZRR7 1453 aa23.35■■□□□ 1.33
PLOD3-205ENST00000440925 CDK11AQ9UQ88 783 aaPredicted RBP23.34■■□□□ 1.33
PLOD3-205ENST00000440925 WDR7Q9Y4E6 1490 aa23.34■■□□□ 1.33
PLOD3-205ENST00000440925 TROQ12816 1431 aaPredicted RBP23.33■■□□□ 1.33
PLOD3-205ENST00000440925 CFAP43Q8NDM7 1665 aa23.33■■□□□ 1.33
PLOD3-205ENST00000440925 APLP2Q06481 763 aa23.32■■□□□ 1.32
PLOD3-205ENST00000440925 ABCC10Q5T3U5 1492 aa23.28■■□□□ 1.32
PLOD3-205ENST00000440925 MTUS2Q5JR59 1369 aa23.27■■□□□ 1.32
PLOD3-205ENST00000440925 FAM69CQ0P6D2 419 aa23.26■■□□□ 1.31
PLOD3-205ENST00000440925 KIF14Q15058 1648 aa23.26■■□□□ 1.31
PLOD3-205ENST00000440925 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.23■■□□□ 1.31
PLOD3-205ENST00000440925 DIP2BQ9P265 1576 aa23.21■■□□□ 1.31
PLOD3-205ENST00000440925 GLI2P10070 1586 aa23.2■■□□□ 1.3
PLOD3-205ENST00000440925 EHBP1L1Q8N3D4 1523 aa23.2■■□□□ 1.3
PLOD3-205ENST00000440925 NCOA2Q15596 1464 aa23.18■■□□□ 1.3
PLOD3-205ENST00000440925 KIF13AQ9H1H9 1805 aa23.17■■□□□ 1.3
PLOD3-205ENST00000440925 PHLDB1Q86UU1 1377 aa23.16■■□□□ 1.3
PLOD3-205ENST00000440925 TTC37Q6PGP7 1564 aa23.16■■□□□ 1.3
PLOD3-205ENST00000440925 GPATCH8Q9UKJ3 1502 aaKnown RBP23.15■■□□□ 1.3
PLOD3-205ENST00000440925 TRHP20396 242 aaPredicted RBP23.15■■□□□ 1.3
PLOD3-205ENST00000440925 ABCA9Q8IUA7 1624 aa23.15■■□□□ 1.3
PLOD3-205ENST00000440925 CD109Q6YHK3 1445 aa23.12■■□□□ 1.29
PLOD3-205ENST00000440925 PLCH2O75038 1416 aa23.11■■□□□ 1.29
PLOD3-205ENST00000440925 SUPT6HQ7KZ85 1726 aaKnown RBP23.1■■□□□ 1.29
PLOD3-205ENST00000440925 MAP3K4Q9Y6R4 1608 aa23.09■■□□□ 1.29
PLOD3-205ENST00000440925 CCNB3Q8WWL7 1395 aa23.09■■□□□ 1.29
PLOD3-205ENST00000440925 ZNF644Q9H582 1327 aaPredicted RBP23.08■■□□□ 1.28
PLOD3-205ENST00000440925 PPRC1Q5VV67 1664 aaKnown RBP23.05■■□□□ 1.28
PLOD3-205ENST00000440925 CDC42BPAQ5VT25 1732 aa23.04■■□□□ 1.28
PLOD3-205ENST00000440925 CDC42BPBQ9Y5S2 1711 aa23.03■■□□□ 1.28
PLOD3-205ENST00000440925 MYOM3Q5VTT5 1437 aa23.03■■□□□ 1.28
PLOD3-205ENST00000440925 CFDP1Q9UEE9 299 aaPredicted RBP23.02■■□□□ 1.28
PLOD3-205ENST00000440925 EFCAB2Q5VUJ9 269 aa23■■□□□ 1.27
PLOD3-205ENST00000440925 ARAP3Q8WWN8 1544 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 194.4 ms