RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 SHROOM2Q13796 1616 aa14.85□□□□□ -0.03
HDAC6-209ENST00000440653 MAPKBP1O60336 1514 aa14.85□□□□□ -0.03
HDAC6-209ENST00000440653 GRIN2AQ12879 1464 aa14.84□□□□□ -0.03
HDAC6-209ENST00000440653 NPM1P06748 294 aaKnown RBP eCLIP14.84□□□□□ -0.03
HDAC6-209ENST00000440653 NUP160Q12769 1436 aa14.83□□□□□ -0.04
HDAC6-209ENST00000440653 EEA1Q15075 1411 aa14.82□□□□□ -0.04
HDAC6-209ENST00000440653 PRG4Q92954 1404 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-209ENST00000440653 CUX1P39880 1505 aa14.79□□□□□ -0.04
HDAC6-209ENST00000440653 DISP3Q9P2K9 1392 aa14.77□□□□□ -0.04
HDAC6-209ENST00000440653 ADCY10Q96PN6 1610 aa14.75□□□□□ -0.05
HDAC6-209ENST00000440653 WRNQ14191 1432 aaPredicted RBP eCLIP14.75□□□□□ -0.05
HDAC6-209ENST00000440653 ABCA5Q8WWZ7 1642 aa14.74□□□□□ -0.05
HDAC6-209ENST00000440653 COL17A1Q9UMD9 1497 aaPredicted RBP14.74□□□□□ -0.05
HDAC6-209ENST00000440653 BIVM-ERCC5R4GMW8 1640 aa14.74□□□□□ -0.05
HDAC6-209ENST00000440653 JPH4Q96JJ6 628 aa14.72□□□□□ -0.05
HDAC6-209ENST00000440653 PPRC1Q5VV67 1664 aaKnown RBP14.71□□□□□ -0.06
HDAC6-209ENST00000440653 TOP2BQ02880 1626 aa14.7□□□□□ -0.06
HDAC6-209ENST00000440653 ADAMTS12P58397 1594 aa14.7□□□□□ -0.06
HDAC6-209ENST00000440653 ABCA10Q8WWZ4 1543 aa14.67□□□□□ -0.06
HDAC6-209ENST00000440653 KIF21BO75037 1637 aa14.64□□□□□ -0.07
HDAC6-209ENST00000440653 FHAD1B1AJZ9 1412 aa14.62□□□□□ -0.07
HDAC6-209ENST00000440653 LOC105371045A0A1W2PR82 267 aa14.61□□□□□ -0.07
HDAC6-209ENST00000440653 GOLGA3Q08378 1498 aa14.57□□□□□ -0.08
HDAC6-209ENST00000440653 GLI2P10070 1586 aa14.55□□□□□ -0.08
HDAC6-209ENST00000440653 CERKQ8TCT0 537 aa14.54□□□□□ -0.08
HDAC6-209ENST00000440653 ASXL2Q76L83 1435 aa14.53□□□□□ -0.08
HDAC6-209ENST00000440653 FAM9AQ8IZU1 332 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-209ENST00000440653 RUSC2Q8N2Y8 1516 aa14.51□□□□□ -0.09
HDAC6-209ENST00000440653 SPATA31D1Q6ZQQ2 1576 aa14.51□□□□□ -0.09
HDAC6-209ENST00000440653 TTBK1Q5TCY1 1321 aaPredicted RBP14.5□□□□□ -0.09
HDAC6-209ENST00000440653 TNIKQ9UKE5 1360 aa14.49□□□□□ -0.09
HDAC6-209ENST00000440653 ERICH3Q5RHP9 1530 aa14.48□□□□□ -0.09
HDAC6-209ENST00000440653 PLB1Q6P1J6 1458 aa14.47□□□□□ -0.09
HDAC6-209ENST00000440653 PTPRMP28827 1452 aa14.46□□□□□ -0.09
HDAC6-209ENST00000440653 MAP3K4Q9Y6R4 1608 aa14.45□□□□□ -0.1
HDAC6-209ENST00000440653 ABCC2Q92887 1545 aa14.45□□□□□ -0.1
HDAC6-209ENST00000440653 CEP162Q5TB80 1403 aa14.44□□□□□ -0.1
HDAC6-209ENST00000440653 PCF11O94913 1555 aaKnown RBP14.43□□□□□ -0.1
HDAC6-209ENST00000440653 EPRSP07814 1512 aaKnown RBP14.43□□□□□ -0.1
HDAC6-209ENST00000440653 TEX14Q8IWB6 1497 aa14.43□□□□□ -0.1
HDAC6-209ENST00000440653 PTPRGP23470 1445 aa14.42□□□□□ -0.1
HDAC6-209ENST00000440653 HSPA2P54652 639 aa14.42□□□□□ -0.1
HDAC6-209ENST00000440653 CSRNP3Q8WYN3 585 aa14.42□□□□□ -0.1
HDAC6-209ENST00000440653 CUL7Q14999 1698 aa14.41□□□□□ -0.1
HDAC6-209ENST00000440653 TRIM26Q12899 539 aaPredicted RBP14.4□□□□□ -0.1
HDAC6-209ENST00000440653 ADAMTSL3P82987 1691 aa14.37□□□□□ -0.11
HDAC6-209ENST00000440653 KIF27Q86VH2 1401 aa14.36□□□□□ -0.11
HDAC6-209ENST00000440653 PRXQ9BXM0 1461 aa14.34□□□□□ -0.11
HDAC6-209ENST00000440653 PCGF6Q9BYE7 350 aa14.34□□□□□ -0.11
HDAC6-209ENST00000440653 KIAA0586Q9BVV6 1533 aa14.34□□□□□ -0.11
HDAC6-209ENST00000440653 HRCP23327 699 aa14.29□□□□□ -0.12
HDAC6-209ENST00000440653 UHRF1BP1LA0JNW5 1464 aa14.29□□□□□ -0.12
HDAC6-209ENST00000440653 RAPGEF2Q9Y4G8 1499 aa14.29□□□□□ -0.12
HDAC6-209ENST00000440653 MADDQ8WXG6 1647 aa14.27□□□□□ -0.12
HDAC6-209ENST00000440653 UACAQ9BZF9 1416 aa14.27□□□□□ -0.12
HDAC6-209ENST00000440653 KDM5BQ9UGL1 1544 aa14.26□□□□□ -0.13
HDAC6-209ENST00000440653 CLIP1P30622 1438 aa14.26□□□□□ -0.13
HDAC6-209ENST00000440653 PLPPR3Q6T4P5 718 aa14.26□□□□□ -0.13
HDAC6-209ENST00000440653 CD109Q6YHK3 1445 aa14.24□□□□□ -0.13
HDAC6-209ENST00000440653 ZCCHC11Q5TAX3 1644 aaKnown RBP14.24□□□□□ -0.13
HDAC6-209ENST00000440653 MAGI3Q5TCQ9 1506 aa14.24□□□□□ -0.13
HDAC6-209ENST00000440653 BCORL1Q5H9F3 1711 aa14.24□□□□□ -0.13
HDAC6-209ENST00000440653 UBTFP17480 764 aaKnown RBP14.23□□□□□ -0.13
HDAC6-209ENST00000440653 VPS8Q8N3P4 1428 aa14.23□□□□□ -0.13
HDAC6-209ENST00000440653 EHMT2Q96KQ7 1210 aa14.21□□□□□ -0.13
HDAC6-209ENST00000440653 KCNH8Q96L42 1107 aa14.2□□□□□ -0.14
HDAC6-209ENST00000440653 CARMIL2Q6F5E8 1435 aa14.2□□□□□ -0.14
HDAC6-209ENST00000440653 RIMS1Q86UR5 1692 aaKnown RBP14.2□□□□□ -0.14
HDAC6-209ENST00000440653 WDR7Q9Y4E6 1490 aa14.19□□□□□ -0.14
HDAC6-209ENST00000440653 ARID4BQ4LE39 1312 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-209ENST00000440653 CFAP43Q8NDM7 1665 aa14.16□□□□□ -0.14
HDAC6-209ENST00000440653 ARAP3Q8WWN8 1544 aa14.15□□□□□ -0.14
HDAC6-209ENST00000440653 CTTNBP2Q8WZ74 1663 aa14.15□□□□□ -0.14
HDAC6-209ENST00000440653 RAPGEF3O95398 923 aa14.15□□□□□ -0.14
HDAC6-209ENST00000440653 IGF1RP08069 1367 aa14.12□□□□□ -0.15
HDAC6-209ENST00000440653 DISP1Q96F81 1524 aa14.11□□□□□ -0.15
HDAC6-209ENST00000440653 ZEB1P37275 1124 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-209ENST00000440653 EFCAB5A4FU69 1503 aa14.09□□□□□ -0.15
HDAC6-209ENST00000440653 STRCQ7RTU9 1775 aa14.09□□□□□ -0.15
HDAC6-209ENST00000440653 YEATS2Q9ULM3 1422 aa14.07□□□□□ -0.16
HDAC6-209ENST00000440653 IQGAP2Q13576 1575 aa14.05□□□□□ -0.16
HDAC6-209ENST00000440653 DMRT2Q9Y5R5 561 aa14.04□□□□□ -0.16
HDAC6-209ENST00000440653 CARMIL1Q5VZK9 1371 aa14.04□□□□□ -0.16
HDAC6-209ENST00000440653 ARHGAP35Q9NRY4 1499 aa14.03□□□□□ -0.16
HDAC6-209ENST00000440653 MAP3K1Q13233 1512 aa14.03□□□□□ -0.16
HDAC6-209ENST00000440653 LTBP4Q8N2S1 1624 aa14.02□□□□□ -0.16
HDAC6-209ENST00000440653 FRMPD1Q5SYB0 1578 aa14.02□□□□□ -0.16
HDAC6-209ENST00000440653 MLECQ14165 292 aa13.99□□□□□ -0.17
HDAC6-209ENST00000440653 MED1Q15648 1581 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-209ENST00000440653 SIGLEC1Q9BZZ2 1709 aa13.98□□□□□ -0.17
HDAC6-209ENST00000440653 CEBPAP49715 358 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-209ENST00000440653 APLP2Q06481 763 aa13.97□□□□□ -0.17
HDAC6-209ENST00000440653 PHLDB1Q86UU1 1377 aa13.96□□□□□ -0.17
HDAC6-209ENST00000440653 PREX1Q8TCU6 1659 aa13.96□□□□□ -0.17
HDAC6-209ENST00000440653 UBAP1LF5GYI3 381 aa13.96□□□□□ -0.17
HDAC6-209ENST00000440653 KIAA0556O60303 1618 aa13.96□□□□□ -0.17
HDAC6-209ENST00000440653 ARHGEF40Q8TER5 1519 aa13.95□□□□□ -0.18
HDAC6-209ENST00000440653 IQSEC2Q5JU85 1478 aa13.95□□□□□ -0.18
HDAC6-209ENST00000440653 PTPRTO14522 1441 aa13.95□□□□□ -0.18
HDAC6-209ENST00000440653 TIAM1Q13009 1591 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms