RNA–Protein interactions for RNA: ENST00000440486.6

FGFR3-205, Transcript of fibroblast growth factor receptor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FGFR3, Length 4,287 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-205ENST00000440486 MRS2Q9HD23 443 aa25.09■■□□□ 1.61
FGFR3-205ENST00000440486 CARMIL1Q5VZK9 1371 aa25.09■■□□□ 1.61
FGFR3-205ENST00000440486 TOP2AP11388 1531 aaKnown RBP25.08■■□□□ 1.61
FGFR3-205ENST00000440486 TSPY4P0CV99 314 aa25.08■■□□□ 1.6
FGFR3-205ENST00000440486 TSPY10P0CW01 314 aa25.08■■□□□ 1.6
FGFR3-205ENST00000440486 EIF4G2P78344 907 aaKnown RBP eCLIP25.05■■□□□ 1.6
FGFR3-205ENST00000440486 SENP3-EIF4A1A0A087X0R7 540 aa25■■□□□ 1.59
FGFR3-205ENST00000440486 TMC1Q8TDI8 760 aa25■■□□□ 1.59
FGFR3-205ENST00000440486 CHGAP10645 457 aaKnown RBP24.98■■□□□ 1.59
FGFR3-205ENST00000440486 NPM2Q86SE8 214 aaKnown RBP24.91■■□□□ 1.58
FGFR3-205ENST00000440486 RAPGEF2Q9Y4G8 1499 aa24.91■■□□□ 1.58
FGFR3-205ENST00000440486 CANXP27824 592 aaKnown RBP24.9■■□□□ 1.58
FGFR3-205ENST00000440486 SMARCA2P51531 1590 aa24.89■■□□□ 1.58
FGFR3-205ENST00000440486 CFDP1Q9UEE9 299 aaPredicted RBP24.89■■□□□ 1.58
FGFR3-205ENST00000440486 PLEKHD1A6NEE1 506 aa24.88■■□□□ 1.57
FGFR3-205ENST00000440486 KCNH8Q96L42 1107 aa24.87■■□□□ 1.57
FGFR3-205ENST00000440486 BCL11AQ9H165 835 aa24.87■■□□□ 1.57
FGFR3-205ENST00000440486 SMARCA4P51532 1647 aa24.87■■□□□ 1.57
FGFR3-205ENST00000440486 FHAD1B1AJZ9 1412 aa24.87■■□□□ 1.57
FGFR3-205ENST00000440486 RGL3Q3MIN7 710 aa24.86■■□□□ 1.57
FGFR3-205ENST00000440486 ATAD2BQ9ULI0 1458 aa24.84■■□□□ 1.57
FGFR3-205ENST00000440486 CCDC136Q96JN2 1154 aa24.81■■□□□ 1.56
FGFR3-205ENST00000440486 ANP32AP39687 249 aaKnown RBP24.81■■□□□ 1.56
FGFR3-205ENST00000440486 TDRD9Q8NDG6 1382 aaKnown RBP24.79■■□□□ 1.56
FGFR3-205ENST00000440486 SUPT16HQ9Y5B9 1047 aaKnown RBP24.77■■□□□ 1.56
FGFR3-205ENST00000440486 RAB3GAP2Q9H2M9 1393 aa24.77■■□□□ 1.56
FGFR3-205ENST00000440486 SETD5Q9C0A6 1442 aa24.76■■□□□ 1.55
FGFR3-205ENST00000440486 EIF4G1Q04637 1599 aaKnown RBP24.71■■□□□ 1.55
FGFR3-205ENST00000440486 NPM1P06748 294 aaKnown RBP eCLIP24.7■■□□□ 1.54
FGFR3-205ENST00000440486 FOXD1Q16676 465 aa24.7■■□□□ 1.54
FGFR3-205ENST00000440486 SENP3Q9H4L4 574 aaPredicted RBP24.69■■□□□ 1.54
FGFR3-205ENST00000440486 CARD11Q9BXL7 1154 aa24.65■■□□□ 1.54
FGFR3-205ENST00000440486 CADPSQ9ULU8 1353 aa24.64■■□□□ 1.53
FGFR3-205ENST00000440486 ARHGAP35Q9NRY4 1499 aa24.63■■□□□ 1.53
FGFR3-205ENST00000440486 NEFMP07197 916 aa24.61■■□□□ 1.53
FGFR3-205ENST00000440486 FHOD3Q2V2M9 1422 aa24.61■■□□□ 1.53
FGFR3-205ENST00000440486 WDR43Q15061 677 aaKnown RBP eCLIP24.6■■□□□ 1.531e-6■■■■■ 28.4
FGFR3-205ENST00000440486 TIMELESSQ9UNS1 1208 aa24.6■■□□□ 1.53
FGFR3-205ENST00000440486 STAG3Q9UJ98 1225 aa24.59■■□□□ 1.53
FGFR3-205ENST00000440486 SLC24A1O60721 1099 aa24.58■■□□□ 1.53
FGFR3-205ENST00000440486 DHX57Q6P158 1386 aaKnown RBP24.55■■□□□ 1.52
FGFR3-205ENST00000440486 HSPA5P11021 654 aaKnown RBP24.54■■□□□ 1.52
FGFR3-205ENST00000440486 ZBTB47Q9UFB7 747 aaPredicted RBP24.54■■□□□ 1.52
FGFR3-205ENST00000440486 PPP1R15AO75807 674 aaPredicted RBP24.53■■□□□ 1.52
FGFR3-205ENST00000440486 NBR1Q14596 966 aa24.52■■□□□ 1.52
FGFR3-205ENST00000440486 ERCC6Q03468 1493 aa24.5■■□□□ 1.51
FGFR3-205ENST00000440486 PLPPR3Q6T4P5 718 aa24.5■■□□□ 1.51
FGFR3-205ENST00000440486 DCAF11Q8TEB1 546 aa24.47■■□□□ 1.51
FGFR3-205ENST00000440486 FMN1Q68DA7 1419 aa24.47■■□□□ 1.51
FGFR3-205ENST00000440486 ESF1Q9H501 851 aaKnown RBP24.46■■□□□ 1.51
FGFR3-205ENST00000440486 MPHOSPH9Q99550 1183 aa24.45■■□□□ 1.5
FGFR3-205ENST00000440486 PKD2Q13563 968 aa24.42■■□□□ 1.5
FGFR3-205ENST00000440486 PDS5BQ9NTI5 1447 aa24.42■■□□□ 1.5
FGFR3-205ENST00000440486 CCER2I3L3R5 266 aa24.42■■□□□ 1.5
FGFR3-205ENST00000440486 B4GALNT3Q6L9W6 998 aa24.4■■□□□ 1.5
FGFR3-205ENST00000440486 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.38■■□□□ 1.49
FGFR3-205ENST00000440486 IGF1RP08069 1367 aa24.38■■□□□ 1.49
FGFR3-205ENST00000440486 L3MBTL2Q969R5 705 aa24.37■■□□□ 1.49
FGFR3-205ENST00000440486 CC2D1BQ5T0F9 858 aaKnown RBP24.35■■□□□ 1.49
FGFR3-205ENST00000440486 KNSTRNQ9Y448 316 aa24.35■■□□□ 1.49
FGFR3-205ENST00000440486 PPP4R2Q9NY27 417 aa24.32■■□□□ 1.48
FGFR3-205ENST00000440486 FANCD2Q9BXW9 1451 aa24.3■■□□□ 1.48
FGFR3-205ENST00000440486 KIF21BO75037 1637 aa24.27■■□□□ 1.48
FGFR3-205ENST00000440486 NEUROD2Q15784 382 aa24.26■■□□□ 1.47
FGFR3-205ENST00000440486 FGD5Q6ZNL6 1462 aa24.24■■□□□ 1.47
FGFR3-205ENST00000440486 SYNJ1O43426 1573 aa24.24■■□□□ 1.47
FGFR3-205ENST00000440486 ANP32EQ9BTT0 268 aa24.23■■□□□ 1.47
FGFR3-205ENST00000440486 UPF2Q9HAU5 1272 aaKnown RBP24.23■■□□□ 1.47
FGFR3-205ENST00000440486 NUP155O75694 1391 aa24.23■■□□□ 1.47
FGFR3-205ENST00000440486 RAD54L2Q9Y4B4 1467 aa24.22■■□□□ 1.47
FGFR3-205ENST00000440486 TNNT2P45379 298 aaPredicted RBP24.22■■□□□ 1.47
FGFR3-205ENST00000440486 CDCA8Q53HL2 280 aa24.2■■□□□ 1.46
FGFR3-205ENST00000440486 HNRNPMP52272 730 aaKnown RBP eCLIP24.17■■□□□ 1.465e-6■■□□□ 13.2
FGFR3-205ENST00000440486 PHLDB1Q86UU1 1377 aa24.17■■□□□ 1.46
FGFR3-205ENST00000440486 ARAP1Q96P48 1450 aa24.16■■□□□ 1.46
FGFR3-205ENST00000440486 RBM19Q9Y4C8 960 aaKnown RBP24.15■■□□□ 1.46
FGFR3-205ENST00000440486 NCAPD3P42695 1498 aa24.15■■□□□ 1.46
FGFR3-205ENST00000440486 CARMIL2Q6F5E8 1435 aa24.15■■□□□ 1.46
FGFR3-205ENST00000440486 HSP90AA1P07900 732 aaKnown RBP24.15■■□□□ 1.46
FGFR3-205ENST00000440486 TMF1P82094 1093 aa24.14■■□□□ 1.45
FGFR3-205ENST00000440486 JPH4Q96JJ6 628 aa24.13■■□□□ 1.45
FGFR3-205ENST00000440486 PPM1GO15355 546 aaPredicted RBP24.11■■□□□ 1.45
FGFR3-205ENST00000440486 TSHZ2Q9NRE2 1034 aa24.1■■□□□ 1.45
FGFR3-205ENST00000440486 ANKRD30AQ9BXX3 1397 aa24.1■■□□□ 1.45
FGFR3-205ENST00000440486 ARXQ96QS3 562 aa24.09■■□□□ 1.45
FGFR3-205ENST00000440486 RGS3P49796 1198 aa24.06■■□□□ 1.44
FGFR3-205ENST00000440486 CCDC18Q5T9S5 1454 aa24.06■■□□□ 1.44
FGFR3-205ENST00000440486 CFAP53Q96M91 514 aa24.04■■□□□ 1.44
FGFR3-205ENST00000440486 FRAT1Q92837 279 aaPredicted RBP24.03■■□□□ 1.44
FGFR3-205ENST00000440486 ROCK2O75116 1388 aaKnown RBP24.02■■□□□ 1.44
FGFR3-205ENST00000440486 ZNF644Q9H582 1327 aaPredicted RBP24.02■■□□□ 1.44
FGFR3-205ENST00000440486 PLEKHG5O94827 1062 aa24.02■■□□□ 1.44
FGFR3-205ENST00000440486 GGT6Q6P531 493 aa24.01■■□□□ 1.43
FGFR3-205ENST00000440486 SAFB2Q14151 953 aaKnown RBP eCLIP24■■□□□ 1.43
FGFR3-205ENST00000440486 LRRC9Q6ZRR7 1453 aa24■■□□□ 1.43
FGFR3-205ENST00000440486 GAPVD1Q14C86 1478 aa23.99■■□□□ 1.43
FGFR3-205ENST00000440486 PRXQ9BXM0 1461 aa23.98■■□□□ 1.43
FGFR3-205ENST00000440486 FGD6Q6ZV73 1430 aa23.98■■□□□ 1.43
FGFR3-205ENST00000440486 ST20-MTHFSA0A0A6YYL1 179 aa23.97■■□□□ 1.43
FGFR3-205ENST00000440486 EFCAB2Q5VUJ9 269 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 212.2 ms