RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 ARID3CA6NKF2 412 aa11.79□□□□□ -0.52
APP-209ENST00000440126 PDS5BQ9NTI5 1447 aa11.79□□□□□ -0.52
APP-209ENST00000440126 FAM50AQ14320 339 aaKnown RBP11.75□□□□□ -0.53
APP-209ENST00000440126 AQRO60306 1485 aaKnown RBP eCLIP11.75□□□□□ -0.53
APP-209ENST00000440126 GAPVD1Q14C86 1478 aa11.74□□□□□ -0.53
APP-209ENST00000440126 ERICH6Q7L0X2 663 aa11.73□□□□□ -0.53
APP-209ENST00000440126 PCF11O94913 1555 aaKnown RBP11.71□□□□□ -0.53
APP-209ENST00000440126 DIEXFQ68CQ4 756 aaKnown RBP11.7□□□□□ -0.54
APP-209ENST00000440126 CCNB3Q8WWL7 1395 aa11.7□□□□□ -0.54
APP-209ENST00000440126 PHLDB1Q86UU1 1377 aa11.69□□□□□ -0.54
APP-209ENST00000440126 WDR97A6NE52 1622 aa11.68□□□□□ -0.54
APP-209ENST00000440126 TIAM1Q13009 1591 aa11.68□□□□□ -0.54
APP-209ENST00000440126 ZNF608Q9ULD9 1512 aaPredicted RBP11.68□□□□□ -0.54
APP-209ENST00000440126 ABCA5Q8WWZ7 1642 aa11.67□□□□□ -0.54
APP-209ENST00000440126 SLC24A1O60721 1099 aa11.66□□□□□ -0.54
APP-209ENST00000440126 FBLN2P98095 1184 aa11.66□□□□□ -0.54
APP-209ENST00000440126 LRRC9Q6ZRR7 1453 aa11.66□□□□□ -0.54
APP-209ENST00000440126 CUL7Q14999 1698 aa11.65□□□□□ -0.54
APP-209ENST00000440126 DHX57Q6P158 1386 aaKnown RBP11.65□□□□□ -0.54
APP-209ENST00000440126 RRBP1Q9P2E9 1410 aaKnown RBP11.65□□□□□ -0.54
APP-209ENST00000440126 TARBP1Q13395 1621 aaKnown RBP11.64□□□□□ -0.55
APP-209ENST00000440126 CTTNBP2Q8WZ74 1663 aa11.64□□□□□ -0.55
APP-209ENST00000440126 FHAD1B1AJZ9 1412 aa11.64□□□□□ -0.55
APP-209ENST00000440126 ERCC6Q03468 1493 aa11.63□□□□□ -0.55
APP-209ENST00000440126 ZNF316A6NFI3 1004 aaPredicted RBP11.63□□□□□ -0.55
APP-209ENST00000440126 MRC2Q9UBG0 1479 aa11.63□□□□□ -0.55
APP-209ENST00000440126 RAB3GAP2Q9H2M9 1393 aa11.6□□□□□ -0.55
APP-209ENST00000440126 YTHDC1Q96MU7 727 aaKnown RBP11.6□□□□□ -0.55
APP-209ENST00000440126 MTUS2Q5JR59 1369 aa11.59□□□□□ -0.55
APP-209ENST00000440126 ACIN1Q9UKV3 1341 aaKnown RBP11.59□□□□□ -0.55
APP-209ENST00000440126 NEUROD1Q13562 356 aa11.59□□□□□ -0.55
APP-209ENST00000440126 PBRM1Q86U86 1689 aa11.58□□□□□ -0.56
APP-209ENST00000440126 CASKIN1Q8WXD9 1431 aa11.58□□□□□ -0.56
APP-209ENST00000440126 SIN3AQ96ST3 1273 aa11.57□□□□□ -0.56
APP-209ENST00000440126 EFCAB5A4FU69 1503 aa11.56□□□□□ -0.56
APP-209ENST00000440126 FYCO1Q9BQS8 1478 aa11.56□□□□□ -0.56
APP-209ENST00000440126 CENPBP07199 599 aaPredicted RBP11.56□□□□□ -0.56
APP-209ENST00000440126 CFAP43Q8NDM7 1665 aa11.56□□□□□ -0.56
APP-209ENST00000440126 SNAPC4Q5SXM2 1469 aa11.56□□□□□ -0.56
APP-209ENST00000440126 FMN1Q68DA7 1419 aa11.55□□□□□ -0.56
APP-209ENST00000440126 LRRIQ1Q96JM4 1722 aa11.55□□□□□ -0.56
APP-209ENST00000440126 CHIC2Q9UKJ5 165 aa11.55□□□□□ -0.56
APP-209ENST00000440126 MIER1Q8N108 512 aa11.54□□□□□ -0.56
APP-209ENST00000440126 GRIN2BQ13224 1484 aa11.53□□□□□ -0.56
APP-209ENST00000440126 ADAMTS12P58397 1594 aa11.52□□□□□ -0.56
APP-209ENST00000440126 CHMP7Q8WUX9 453 aaPredicted RBP11.52□□□□□ -0.56
APP-209ENST00000440126 SAMD9Q5K651 1589 aa11.52□□□□□ -0.57
APP-209ENST00000440126 MAP3K1Q13233 1512 aa11.51□□□□□ -0.57
APP-209ENST00000440126 CDK13Q14004 1512 aaKnown RBP11.51□□□□□ -0.57
APP-209ENST00000440126 SETD5Q9C0A6 1442 aa11.51□□□□□ -0.57
APP-209ENST00000440126 IFT140Q96RY7 1462 aa11.5□□□□□ -0.57
APP-209ENST00000440126 HIRIP3Q9BW71 556 aaPredicted RBP11.5□□□□□ -0.57
APP-209ENST00000440126 RRP7BPQ9NSQ0 103 aa11.5□□□□□ -0.57
APP-209ENST00000440126 GTF3C3Q9Y5Q9 886 aa11.5□□□□□ -0.57
APP-209ENST00000440126 IQGAP2Q13576 1575 aa11.5□□□□□ -0.57
APP-209ENST00000440126 WDR62O43379 1518 aa11.5□□□□□ -0.57
APP-209ENST00000440126 MAGI3Q5TCQ9 1506 aa11.5□□□□□ -0.57
APP-209ENST00000440126 EIF4G3O43432 1585 aaKnown RBP11.49□□□□□ -0.57
APP-209ENST00000440126 NCOA2Q15596 1464 aa11.49□□□□□ -0.57
APP-209ENST00000440126 PTPRKQ15262 1439 aa11.48□□□□□ -0.57
APP-209ENST00000440126 FGD6Q6ZV73 1430 aa11.48□□□□□ -0.57
APP-209ENST00000440126 MAPKBP1O60336 1514 aa11.46□□□□□ -0.57
APP-209ENST00000440126 GRIN2AQ12879 1464 aa11.44□□□□□ -0.58
APP-209ENST00000440126 THOC2Q8NI27 1593 aaKnown RBP11.44□□□□□ -0.58
APP-209ENST00000440126 ZNF644Q9H582 1327 aaPredicted RBP11.44□□□□□ -0.58
APP-209ENST00000440126 EPRSP07814 1512 aaKnown RBP11.43□□□□□ -0.58
APP-209ENST00000440126 MYOM3Q5VTT5 1437 aa11.42□□□□□ -0.58
APP-209ENST00000440126 ZNF777Q9ULD5 760 aaPredicted RBP11.41□□□□□ -0.58
APP-209ENST00000440126 CLSPNQ9HAW4 1339 aa11.41□□□□□ -0.58
APP-209ENST00000440126 DISP1Q96F81 1524 aa11.41□□□□□ -0.58
APP-209ENST00000440126 TRIM52Q96A61 297 aa11.41□□□□□ -0.58
APP-209ENST00000440126 FOXD1Q16676 465 aa11.4□□□□□ -0.58
APP-209ENST00000440126 SUPT6HQ7KZ85 1726 aaKnown RBP11.4□□□□□ -0.59
APP-209ENST00000440126 PLB1Q6P1J6 1458 aa11.39□□□□□ -0.59
APP-209ENST00000440126 JPH4Q96JJ6 628 aa11.39□□□□□ -0.59
APP-209ENST00000440126 KIAA0586Q9BVV6 1533 aa11.39□□□□□ -0.59
APP-209ENST00000440126 CEP170Q5SW79 1584 aa11.38□□□□□ -0.59
APP-209ENST00000440126 EHBP1L1Q8N3D4 1523 aa11.38□□□□□ -0.59
APP-209ENST00000440126 CCDC18Q5T9S5 1454 aa11.38□□□□□ -0.59
APP-209ENST00000440126 HECW1Q76N89 1606 aa11.38□□□□□ -0.59
APP-209ENST00000440126 KIAA0556O60303 1618 aa11.37□□□□□ -0.59
APP-209ENST00000440126 PTPN23Q9H3S7 1636 aa11.37□□□□□ -0.59
APP-209ENST00000440126 PRG4Q92954 1404 aaPredicted RBP11.37□□□□□ -0.59
APP-209ENST00000440126 UGGT2Q9NYU1 1516 aa11.37□□□□□ -0.59
APP-209ENST00000440126 NUP153P49790 1475 aaKnown RBP11.36□□□□□ -0.59
APP-209ENST00000440126 SYNJ2O15056 1496 aa11.35□□□□□ -0.59
APP-209ENST00000440126 NAIPQ13075 1403 aa11.35□□□□□ -0.59
APP-209ENST00000440126 ANP32EQ9BTT0 268 aa11.33□□□□□ -0.6
APP-209ENST00000440126 KDM6BO15054 1643 aa11.33□□□□□ -0.6
APP-209ENST00000440126 DDX10Q13206 875 aaKnown RBP11.33□□□□□ -0.6
APP-209ENST00000440126 KCNH8Q96L42 1107 aa11.33□□□□□ -0.6
APP-209ENST00000440126 MAGI1Q96QZ7 1491 aaPredicted RBP11.33□□□□□ -0.6
APP-209ENST00000440126 HFM1A2PYH4 1435 aa11.32□□□□□ -0.6
APP-209ENST00000440126 RAPGEF6Q8TEU7 1601 aa11.31□□□□□ -0.6
APP-209ENST00000440126 TONSLQ96HA7 1378 aa11.3□□□□□ -0.6
APP-209ENST00000440126 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.3□□□□□ -0.6
APP-209ENST00000440126 ARHGEF11O15085 1522 aa11.3□□□□□ -0.6
APP-209ENST00000440126 CFDP1Q9UEE9 299 aaPredicted RBP11.29□□□□□ -0.6
APP-209ENST00000440126 PLEKHG5O94827 1062 aa11.29□□□□□ -0.6
APP-209ENST00000440126 PPP1R15AO75807 674 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms