RNA–Protein interactions for RNA: ENST00000439928.2

SPATA13-213, Transcript of spermatogenesis associated 13, humanhuman

TSL 1 (best) BASIC

Gene SPATA13, Length 1,721 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA13-213ENST00000439928 CEP162Q5TB80 1403 aa19.46■□□□□ 0.71
SPATA13-213ENST00000439928 FBLN2P98095 1184 aa19.45■□□□□ 0.7
SPATA13-213ENST00000439928 IQGAP2Q13576 1575 aa19.4■□□□□ 0.7
SPATA13-213ENST00000439928 CEP170Q5SW79 1584 aa19.39■□□□□ 0.69
SPATA13-213ENST00000439928 CLIP1P30622 1438 aa19.38■□□□□ 0.69
SPATA13-213ENST00000439928 RANGAP1P46060 587 aaPredicted RBP19.37■□□□□ 0.69
SPATA13-213ENST00000439928 NUP160Q12769 1436 aa19.34■□□□□ 0.69
SPATA13-213ENST00000439928 KIAA0586Q9BVV6 1533 aa19.33■□□□□ 0.68
SPATA13-213ENST00000439928 EFCAB5A4FU69 1503 aa19.32■□□□□ 0.68
SPATA13-213ENST00000439928 SAMD9Q5K651 1589 aa19.28■□□□□ 0.68
SPATA13-213ENST00000439928 ARHGAP35Q9NRY4 1499 aa19.27■□□□□ 0.68
SPATA13-213ENST00000439928 UGGT2Q9NYU1 1516 aa19.26■□□□□ 0.67
SPATA13-213ENST00000439928 ARAP1Q96P48 1450 aa19.22■□□□□ 0.67
SPATA13-213ENST00000439928 CLASP1Q7Z460 1538 aa19.21■□□□□ 0.67
SPATA13-213ENST00000439928 KIAA0556O60303 1618 aa19.2■□□□□ 0.66
SPATA13-213ENST00000439928 SHROOM2Q13796 1616 aa19.19■□□□□ 0.66
SPATA13-213ENST00000439928 VPS8Q8N3P4 1428 aa19.17■□□□□ 0.66
SPATA13-213ENST00000439928 FHOD3Q2V2M9 1422 aa19.16■□□□□ 0.66
SPATA13-213ENST00000439928 P3H3Q8IVL6 736 aa19.14■□□□□ 0.66
SPATA13-213ENST00000439928 JPH4Q96JJ6 628 aa19.14■□□□□ 0.66
SPATA13-213ENST00000439928 CARMIL2Q6F5E8 1435 aa19.14■□□□□ 0.65
SPATA13-213ENST00000439928 DISP1Q96F81 1524 aa19.14■□□□□ 0.65
SPATA13-213ENST00000439928 FMN1Q68DA7 1419 aa19.11■□□□□ 0.65
SPATA13-213ENST00000439928 OSCARQ8IYS5 282 aa19.1■□□□□ 0.65
SPATA13-213ENST00000439928 PCF11O94913 1555 aaKnown RBP19.08■□□□□ 0.65
SPATA13-213ENST00000439928 PRG4Q92954 1404 aaPredicted RBP19.08■□□□□ 0.64
SPATA13-213ENST00000439928 FYCO1Q9BQS8 1478 aa19.03■□□□□ 0.64
SPATA13-213ENST00000439928 HECW1Q76N89 1606 aa19■□□□□ 0.63
SPATA13-213ENST00000439928 ERCC6L2Q5T890 1561 aa19■□□□□ 0.63
SPATA13-213ENST00000439928 APLP2Q06481 763 aa19■□□□□ 0.63
SPATA13-213ENST00000439928 CASKIN1Q8WXD9 1431 aa19■□□□□ 0.63
SPATA13-213ENST00000439928 RAPGEF6Q8TEU7 1601 aa18.99■□□□□ 0.63
SPATA13-213ENST00000439928 LRRIQ1Q96JM4 1722 aa18.99■□□□□ 0.63
SPATA13-213ENST00000439928 TTBK1Q5TCY1 1321 aaPredicted RBP18.98■□□□□ 0.63
SPATA13-213ENST00000439928 CFAP43Q8NDM7 1665 aa18.98■□□□□ 0.63
SPATA13-213ENST00000439928 DNAJC5Q9H3Z4 198 aa18.96■□□□□ 0.63
SPATA13-213ENST00000439928 ATP1B4Q9UN42 357 aaPredicted RBP18.95■□□□□ 0.62
SPATA13-213ENST00000439928 TIAM1Q13009 1591 aa18.94■□□□□ 0.62
SPATA13-213ENST00000439928 PTPRGP23470 1445 aa18.93■□□□□ 0.62
SPATA13-213ENST00000439928 MAP3K1Q13233 1512 aa18.92■□□□□ 0.62
SPATA13-213ENST00000439928 CCDC18Q5T9S5 1454 aa18.91■□□□□ 0.62
SPATA13-213ENST00000439928 ABCA8O94911 1581 aa18.9■□□□□ 0.62
SPATA13-213ENST00000439928 PLB1Q6P1J6 1458 aa18.9■□□□□ 0.62
SPATA13-213ENST00000439928 EPRSP07814 1512 aaKnown RBP18.86■□□□□ 0.61
SPATA13-213ENST00000439928 NUP153P49790 1475 aaKnown RBP18.85■□□□□ 0.61
SPATA13-213ENST00000439928 PPARGC1BQ86YN6 1023 aaKnown RBP18.85■□□□□ 0.61
SPATA13-213ENST00000439928 ARHGEF11O15085 1522 aa18.84■□□□□ 0.61
SPATA13-213ENST00000439928 UACAQ9BZF9 1416 aa18.83■□□□□ 0.6
SPATA13-213ENST00000439928 CDK13Q14004 1512 aaKnown RBP18.82■□□□□ 0.6
SPATA13-213ENST00000439928 ABCC2Q92887 1545 aa18.82■□□□□ 0.6
SPATA13-213ENST00000439928 RIMBP3CA6NJZ7 1639 aa18.81■□□□□ 0.6
SPATA13-213ENST00000439928 RIMBP3BA6NNM3 1639 aa18.81■□□□□ 0.6
SPATA13-213ENST00000439928 RIMBP3Q9UFD9 1639 aa18.81■□□□□ 0.6
SPATA13-213ENST00000439928 LRRC9Q6ZRR7 1453 aa18.8■□□□□ 0.6
SPATA13-213ENST00000439928 EHBP1L1Q8N3D4 1523 aa18.77■□□□□ 0.6
SPATA13-213ENST00000439928 ADCY10Q96PN6 1610 aa18.77■□□□□ 0.59
SPATA13-213ENST00000439928 ARID3CA6NKF2 412 aa18.77■□□□□ 0.59
SPATA13-213ENST00000439928 SUPT6HQ7KZ85 1726 aaKnown RBP18.77■□□□□ 0.59
SPATA13-213ENST00000439928 UHRF1BP1LA0JNW5 1464 aa18.76■□□□□ 0.59
SPATA13-213ENST00000439928 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.76■□□□□ 0.59
SPATA13-213ENST00000439928 HNRNPUL2Q1KMD3 747 aaKnown RBP18.76■□□□□ 0.59
SPATA13-213ENST00000439928 MTUS2Q5JR59 1369 aa18.76■□□□□ 0.59
SPATA13-213ENST00000439928 KANK4Q5T7N3 995 aaPredicted RBP18.75■□□□□ 0.59
SPATA13-213ENST00000439928 ZCCHC11Q5TAX3 1644 aaKnown RBP18.75■□□□□ 0.59
SPATA13-213ENST00000439928 CDK11AQ9UQ88 783 aaPredicted RBP18.73■□□□□ 0.59
SPATA13-213ENST00000439928 ATP10BO94823 1461 aa18.72■□□□□ 0.59
SPATA13-213ENST00000439928 MAGI3Q5TCQ9 1506 aa18.71■□□□□ 0.59
SPATA13-213ENST00000439928 KDM5BQ9UGL1 1544 aa18.68■□□□□ 0.58
SPATA13-213ENST00000439928 KIF14Q15058 1648 aa18.66■□□□□ 0.58
SPATA13-213ENST00000439928 TRIM26Q12899 539 aaPredicted RBP18.66■□□□□ 0.58
SPATA13-213ENST00000439928 TROQ12816 1431 aaPredicted RBP18.65■□□□□ 0.58
SPATA13-213ENST00000439928 PLEKHD1A6NEE1 506 aa18.63■□□□□ 0.57
SPATA13-213ENST00000439928 NCOA2Q15596 1464 aa18.62■□□□□ 0.57
SPATA13-213ENST00000439928 ITSN2Q9NZM3 1697 aa18.61■□□□□ 0.57
SPATA13-213ENST00000439928 CYB5RLQ6IPT4 315 aa18.6■□□□□ 0.57
SPATA13-213ENST00000439928 NPM1P06748 294 aaKnown RBP eCLIP18.59■□□□□ 0.57
SPATA13-213ENST00000439928 PHLDB1Q86UU1 1377 aa18.57■□□□□ 0.56
SPATA13-213ENST00000439928 CDC42BPAQ5VT25 1732 aa18.56■□□□□ 0.56
SPATA13-213ENST00000439928 PCGF6Q9BYE7 350 aa18.54■□□□□ 0.56
SPATA13-213ENST00000439928 MYO5CQ9NQX4 1742 aa18.54■□□□□ 0.56
SPATA13-213ENST00000439928 MYOM3Q5VTT5 1437 aa18.54■□□□□ 0.56
SPATA13-213ENST00000439928 WDR7Q9Y4E6 1490 aa18.53■□□□□ 0.56
SPATA13-213ENST00000439928 RRBP1Q9P2E9 1410 aaKnown RBP18.53■□□□□ 0.56
SPATA13-213ENST00000439928 CCNB3Q8WWL7 1395 aa18.51■□□□□ 0.55
SPATA13-213ENST00000439928 ASXL2Q76L83 1435 aa18.5■□□□□ 0.55
SPATA13-213ENST00000439928 TTC37Q6PGP7 1564 aa18.5■□□□□ 0.55
SPATA13-213ENST00000439928 PTPN23Q9H3S7 1636 aa18.5■□□□□ 0.55
SPATA13-213ENST00000439928 FGD6Q6ZV73 1430 aa18.5■□□□□ 0.55
SPATA13-213ENST00000439928 PREX2Q70Z35 1606 aa18.49■□□□□ 0.55
SPATA13-213ENST00000439928 MAPKBP1O60336 1514 aa18.49■□□□□ 0.55
SPATA13-213ENST00000439928 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.49■□□□□ 0.55
SPATA13-213ENST00000439928 ABCC10Q5T3U5 1492 aa18.48■□□□□ 0.55
SPATA13-213ENST00000439928 CDC42BPBQ9Y5S2 1711 aa18.48■□□□□ 0.55
SPATA13-213ENST00000439928 KCNH8Q96L42 1107 aa18.46■□□□□ 0.55
SPATA13-213ENST00000439928 MIA2Q96PC5 1412 aa18.46■□□□□ 0.55
SPATA13-213ENST00000439928 ABCA9Q8IUA7 1624 aa18.45■□□□□ 0.54
SPATA13-213ENST00000439928 GPATCH8Q9UKJ3 1502 aaKnown RBP18.45■□□□□ 0.54
SPATA13-213ENST00000439928 FAM50AQ14320 339 aaKnown RBP18.42■□□□□ 0.54
SPATA13-213ENST00000439928 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.41■□□□□ 0.54
SPATA13-213ENST00000439928 TCOF1Q13428 1488 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms