RNA–Protein interactions for RNA: ENST00000439861.5

SYN2-203, Transcript of synapsin II, humanhuman

TSL 2

Gene SYN2, Length 2,128 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-203ENST00000439861 TDRD9Q8NDG6 1382 aaKnown RBP14.24□□□□□ -0.13
SYN2-203ENST00000439861 ABCA5Q8WWZ7 1642 aa14.21□□□□□ -0.13
SYN2-203ENST00000439861 TARBP1Q13395 1621 aaKnown RBP14.19□□□□□ -0.14
SYN2-203ENST00000439861 KANK4Q5T7N3 995 aaPredicted RBP14.19□□□□□ -0.14
SYN2-203ENST00000439861 CUL7Q14999 1698 aa14.19□□□□□ -0.14
SYN2-203ENST00000439861 GAPVD1Q14C86 1478 aa14.17□□□□□ -0.14
SYN2-203ENST00000439861 GTF3C3Q9Y5Q9 886 aa14.16□□□□□ -0.14
SYN2-203ENST00000439861 MRC2Q9UBG0 1479 aa14.15□□□□□ -0.14
SYN2-203ENST00000439861 CLSPNQ9HAW4 1339 aa14.13□□□□□ -0.15
SYN2-203ENST00000439861 P3H3Q8IVL6 736 aa14.12□□□□□ -0.15
SYN2-203ENST00000439861 CTTNBP2Q8WZ74 1663 aa14.12□□□□□ -0.15
SYN2-203ENST00000439861 AQRO60306 1485 aaKnown RBP eCLIP14.1□□□□□ -0.15
SYN2-203ENST00000439861 FHOD3Q2V2M9 1422 aa14.08□□□□□ -0.16
SYN2-203ENST00000439861 PBRM1Q86U86 1689 aa14.08□□□□□ -0.16
SYN2-203ENST00000439861 WDR62O43379 1518 aa14.07□□□□□ -0.16
SYN2-203ENST00000439861 MIER1Q8N108 512 aa14.06□□□□□ -0.16
SYN2-203ENST00000439861 ZNF608Q9ULD9 1512 aaPredicted RBP14.06□□□□□ -0.16
SYN2-203ENST00000439861 PCF11O94913 1555 aaKnown RBP14.05□□□□□ -0.16
SYN2-203ENST00000439861 DHX57Q6P158 1386 aaKnown RBP14.05□□□□□ -0.16
SYN2-203ENST00000439861 RRBP1Q9P2E9 1410 aaKnown RBP14.04□□□□□ -0.16
SYN2-203ENST00000439861 TIAM1Q13009 1591 aa14.04□□□□□ -0.16
SYN2-203ENST00000439861 EFCAB5A4FU69 1503 aa14.03□□□□□ -0.16
SYN2-203ENST00000439861 FHAD1B1AJZ9 1412 aa14.01□□□□□ -0.17
SYN2-203ENST00000439861 ERCC6Q03468 1493 aa14.01□□□□□ -0.17
SYN2-203ENST00000439861 MAP3K1Q13233 1512 aa14.01□□□□□ -0.17
SYN2-203ENST00000439861 IFT140Q96RY7 1462 aa14□□□□□ -0.17
SYN2-203ENST00000439861 ADAMTS12P58397 1594 aa14□□□□□ -0.17
SYN2-203ENST00000439861 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
SYN2-203ENST00000439861 SAMD9Q5K651 1589 aa13.99□□□□□ -0.17
SYN2-203ENST00000439861 YTHDC1Q96MU7 727 aaKnown RBP13.99□□□□□ -0.17
SYN2-203ENST00000439861 GRIN2BQ13224 1484 aa13.98□□□□□ -0.17
SYN2-203ENST00000439861 LRRC9Q6ZRR7 1453 aa13.98□□□□□ -0.17
SYN2-203ENST00000439861 CFAP43Q8NDM7 1665 aa13.98□□□□□ -0.17
SYN2-203ENST00000439861 ATP1B4Q9UN42 357 aaPredicted RBP13.97□□□□□ -0.17
SYN2-203ENST00000439861 CASKIN1Q8WXD9 1431 aa13.96□□□□□ -0.17
SYN2-203ENST00000439861 CCNB3Q8WWL7 1395 aa13.96□□□□□ -0.17
SYN2-203ENST00000439861 FYCO1Q9BQS8 1478 aa13.96□□□□□ -0.18
SYN2-203ENST00000439861 SNAPC4Q5SXM2 1469 aa13.95□□□□□ -0.18
SYN2-203ENST00000439861 EIF4G3O43432 1585 aaKnown RBP13.94□□□□□ -0.18
SYN2-203ENST00000439861 LRRIQ1Q96JM4 1722 aa13.94□□□□□ -0.18
SYN2-203ENST00000439861 PHLDB1Q86UU1 1377 aa13.93□□□□□ -0.18
SYN2-203ENST00000439861 FMN1Q68DA7 1419 aa13.92□□□□□ -0.18
SYN2-203ENST00000439861 IQGAP2Q13576 1575 aa13.91□□□□□ -0.18
SYN2-203ENST00000439861 ITGAEP38570 1179 aa13.88□□□□□ -0.19
SYN2-203ENST00000439861 GRIN2AQ12879 1464 aa13.85□□□□□ -0.19
SYN2-203ENST00000439861 UGGT2Q9NYU1 1516 aa13.83□□□□□ -0.2
SYN2-203ENST00000439861 RAB3GAP2Q9H2M9 1393 aa13.83□□□□□ -0.2
SYN2-203ENST00000439861 KIAA0586Q9BVV6 1533 aa13.82□□□□□ -0.2
SYN2-203ENST00000439861 MAGI1Q96QZ7 1491 aaPredicted RBP13.81□□□□□ -0.2
SYN2-203ENST00000439861 FAM50AQ14320 339 aaKnown RBP13.81□□□□□ -0.2
SYN2-203ENST00000439861 MAGI3Q5TCQ9 1506 aa13.81□□□□□ -0.2
SYN2-203ENST00000439861 DISP1Q96F81 1524 aa13.8□□□□□ -0.2
SYN2-203ENST00000439861 MTUS2Q5JR59 1369 aa13.8□□□□□ -0.2
SYN2-203ENST00000439861 CEP170Q5SW79 1584 aa13.79□□□□□ -0.2
SYN2-203ENST00000439861 SETD5Q9C0A6 1442 aa13.79□□□□□ -0.2
SYN2-203ENST00000439861 SYNJ2O15056 1496 aa13.79□□□□□ -0.2
SYN2-203ENST00000439861 MAPKBP1O60336 1514 aa13.79□□□□□ -0.2
SYN2-203ENST00000439861 CHMP7Q8WUX9 453 aaPredicted RBP13.78□□□□□ -0.2
SYN2-203ENST00000439861 KIAA0556O60303 1618 aa13.77□□□□□ -0.2
SYN2-203ENST00000439861 FBLN2P98095 1184 aa13.77□□□□□ -0.21
SYN2-203ENST00000439861 NCOA2Q15596 1464 aa13.76□□□□□ -0.21
SYN2-203ENST00000439861 ARID3CA6NKF2 412 aa13.76□□□□□ -0.21
SYN2-203ENST00000439861 EPRSP07814 1512 aaKnown RBP13.76□□□□□ -0.21
SYN2-203ENST00000439861 CDK13Q14004 1512 aaKnown RBP13.76□□□□□ -0.21
SYN2-203ENST00000439861 FGD6Q6ZV73 1430 aa13.75□□□□□ -0.21
SYN2-203ENST00000439861 HECW1Q76N89 1606 aa13.75□□□□□ -0.21
SYN2-203ENST00000439861 EHBP1L1Q8N3D4 1523 aa13.73□□□□□ -0.21
SYN2-203ENST00000439861 SUPT6HQ7KZ85 1726 aaKnown RBP13.73□□□□□ -0.21
SYN2-203ENST00000439861 CCDC18Q5T9S5 1454 aa13.73□□□□□ -0.21
SYN2-203ENST00000439861 TIMELESSQ9UNS1 1208 aa13.72□□□□□ -0.21
SYN2-203ENST00000439861 NUP160Q12769 1436 aa13.72□□□□□ -0.21
SYN2-203ENST00000439861 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.72□□□□□ -0.21
SYN2-203ENST00000439861 ARHGEF11O15085 1522 aa13.72□□□□□ -0.21
SYN2-203ENST00000439861 PTPRKQ15262 1439 aa13.71□□□□□ -0.22
SYN2-203ENST00000439861 MYOM3Q5VTT5 1437 aa13.71□□□□□ -0.22
SYN2-203ENST00000439861 NUP153P49790 1475 aaKnown RBP13.69□□□□□ -0.22
SYN2-203ENST00000439861 PRKCSHP14314 528 aaPredicted RBP13.67□□□□□ -0.22
SYN2-203ENST00000439861 JPH4Q96JJ6 628 aa13.67□□□□□ -0.22
SYN2-203ENST00000439861 RAPGEF6Q8TEU7 1601 aa13.67□□□□□ -0.22
SYN2-203ENST00000439861 PTPN23Q9H3S7 1636 aa13.66□□□□□ -0.22
SYN2-203ENST00000439861 PLB1Q6P1J6 1458 aa13.65□□□□□ -0.22
SYN2-203ENST00000439861 SUPT16HQ9Y5B9 1047 aaKnown RBP13.65□□□□□ -0.22
SYN2-203ENST00000439861 SIN3AQ96ST3 1273 aa13.64□□□□□ -0.23
SYN2-203ENST00000439861 CHD1O14646 1710 aa13.61□□□□□ -0.23
SYN2-203ENST00000439861 ERICH6Q7L0X2 663 aa13.61□□□□□ -0.23
SYN2-203ENST00000439861 TCOF1Q13428 1488 aaKnown RBP13.6□□□□□ -0.23
SYN2-203ENST00000439861 PPP1R15AO75807 674 aaPredicted RBP13.6□□□□□ -0.23
SYN2-203ENST00000439861 CARMIL2Q6F5E8 1435 aa13.59□□□□□ -0.23
SYN2-203ENST00000439861 HFM1A2PYH4 1435 aa13.59□□□□□ -0.23
SYN2-203ENST00000439861 NAIPQ13075 1403 aa13.58□□□□□ -0.24
SYN2-203ENST00000439861 PRG4Q92954 1404 aaPredicted RBP13.58□□□□□ -0.24
SYN2-203ENST00000439861 DDX10Q13206 875 aaKnown RBP13.57□□□□□ -0.24
SYN2-203ENST00000439861 KCNH8Q96L42 1107 aa13.56□□□□□ -0.24
SYN2-203ENST00000439861 CHIC2Q9UKJ5 165 aa13.56□□□□□ -0.24
SYN2-203ENST00000439861 MIA2Q96PC5 1412 aa13.56□□□□□ -0.24
SYN2-203ENST00000439861 ABCA8O94911 1581 aa13.55□□□□□ -0.24
SYN2-203ENST00000439861 ZNF644Q9H582 1327 aaPredicted RBP13.54□□□□□ -0.24
SYN2-203ENST00000439861 RRP7BPQ9NSQ0 103 aa13.54□□□□□ -0.24
SYN2-203ENST00000439861 KIF14Q15058 1648 aa13.54□□□□□ -0.24
SYN2-203ENST00000439861 TROQ12816 1431 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms