RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 SHROOM2Q13796 1616 aa32.53■■■□□ 2.8
SEMA3B-206ENST00000439487 FAM9AQ8IZU1 332 aaPredicted RBP32.53■■■□□ 2.8
SEMA3B-206ENST00000439487 PRXQ9BXM0 1461 aa32.5■■■□□ 2.79
SEMA3B-206ENST00000439487 KIAA0586Q9BVV6 1533 aa32.49■■■□□ 2.79
SEMA3B-206ENST00000439487 ERCC6L2Q5T890 1561 aa32.45■■■□□ 2.79
SEMA3B-206ENST00000439487 JPH4Q96JJ6 628 aa32.45■■■□□ 2.79
SEMA3B-206ENST00000439487 ARAP1Q96P48 1450 aa32.44■■■□□ 2.78
SEMA3B-206ENST00000439487 CYB5RLQ6IPT4 315 aa32.4■■■□□ 2.78
SEMA3B-206ENST00000439487 PRG4Q92954 1404 aaPredicted RBP32.38■■■□□ 2.77
SEMA3B-206ENST00000439487 CTTNBP2Q8WZ74 1663 aa32.36■■■□□ 2.77
SEMA3B-206ENST00000439487 IQGAP2Q13576 1575 aa32.36■■■□□ 2.77
SEMA3B-206ENST00000439487 KIF21BO75037 1637 aa32.25■■■□□ 2.75
SEMA3B-206ENST00000439487 UGGT2Q9NYU1 1516 aa32.16■■■□□ 2.74
SEMA3B-206ENST00000439487 EHMT2Q96KQ7 1210 aa32.14■■■□□ 2.74
SEMA3B-206ENST00000439487 CARMIL2Q6F5E8 1435 aa32.13■■■□□ 2.73
SEMA3B-206ENST00000439487 DISP1Q96F81 1524 aa32.11■■■□□ 2.73
SEMA3B-206ENST00000439487 GOLGA3Q08378 1498 aa32.05■■■□□ 2.72
SEMA3B-206ENST00000439487 KIAA0556O60303 1618 aa32.05■■■□□ 2.72
SEMA3B-206ENST00000439487 TTBK1Q5TCY1 1321 aaPredicted RBP32.03■■■□□ 2.72
SEMA3B-206ENST00000439487 TNIKQ9UKE5 1360 aa32.03■■■□□ 2.72
SEMA3B-206ENST00000439487 UBTFP17480 764 aaKnown RBP32■■■□□ 2.71
SEMA3B-206ENST00000439487 PTPRGP23470 1445 aa32■■■□□ 2.71
SEMA3B-206ENST00000439487 RANGAP1P46060 587 aaPredicted RBP31.94■■■□□ 2.7
SEMA3B-206ENST00000439487 ADCY10Q96PN6 1610 aa31.9■■■□□ 2.7
SEMA3B-206ENST00000439487 SAMD9Q5K651 1589 aa31.89■■■□□ 2.7
SEMA3B-206ENST00000439487 P3H3Q8IVL6 736 aa31.88■■■□□ 2.69
SEMA3B-206ENST00000439487 UACAQ9BZF9 1416 aa31.79■■■□□ 2.68
SEMA3B-206ENST00000439487 NPM1P06748 294 aaKnown RBP eCLIP31.75■■■□□ 2.67
SEMA3B-206ENST00000439487 EFCAB5A4FU69 1503 aa31.74■■■□□ 2.67
SEMA3B-206ENST00000439487 UHRF1BP1LA0JNW5 1464 aa31.73■■■□□ 2.67
SEMA3B-206ENST00000439487 ABCC2Q92887 1545 aa31.73■■■□□ 2.67
SEMA3B-206ENST00000439487 FHOD3Q2V2M9 1422 aa31.72■■■□□ 2.67
SEMA3B-206ENST00000439487 PLB1Q6P1J6 1458 aa31.72■■■□□ 2.67
SEMA3B-206ENST00000439487 TRHP20396 242 aaPredicted RBP31.7■■■□□ 2.67
SEMA3B-206ENST00000439487 ABCA8O94911 1581 aa31.69■■■□□ 2.66
SEMA3B-206ENST00000439487 ARHGAP35Q9NRY4 1499 aa31.64■■■□□ 2.66
SEMA3B-206ENST00000439487 MAPKBP1O60336 1514 aa31.61■■■□□ 2.65
SEMA3B-206ENST00000439487 ZCCHC11Q5TAX3 1644 aaKnown RBP31.6■■■□□ 2.65
SEMA3B-206ENST00000439487 KDM5BQ9UGL1 1544 aa31.59■■■□□ 2.65
SEMA3B-206ENST00000439487 LOC105371045A0A1W2PR82 267 aa31.59■■■□□ 2.65
SEMA3B-206ENST00000439487 RAPGEF6Q8TEU7 1601 aa31.57■■■□□ 2.64
SEMA3B-206ENST00000439487 KIF13AQ9H1H9 1805 aa31.55■■■□□ 2.64
SEMA3B-206ENST00000439487 ARID3CA6NKF2 412 aa31.49■■■□□ 2.63
SEMA3B-206ENST00000439487 CLIP1P30622 1438 aa31.49■■■□□ 2.63
SEMA3B-206ENST00000439487 ASXL2Q76L83 1435 aa31.49■■■□□ 2.63
SEMA3B-206ENST00000439487 ABCC10Q5T3U5 1492 aa31.46■■■□□ 2.63
SEMA3B-206ENST00000439487 DIP2BQ9P265 1576 aa31.44■■■□□ 2.62
SEMA3B-206ENST00000439487 FMN1Q68DA7 1419 aa31.43■■■□□ 2.62
SEMA3B-206ENST00000439487 ATP10BO94823 1461 aa31.43■■■□□ 2.62
SEMA3B-206ENST00000439487 NUP153P49790 1475 aaKnown RBP31.42■■■□□ 2.62
SEMA3B-206ENST00000439487 FAM69CQ0P6D2 419 aa31.41■■■□□ 2.62
SEMA3B-206ENST00000439487 CEP162Q5TB80 1403 aa31.39■■■□□ 2.62
SEMA3B-206ENST00000439487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.34■■■□□ 2.61
SEMA3B-206ENST00000439487 HNRNPUL2Q1KMD3 747 aaKnown RBP31.34■■■□□ 2.61
SEMA3B-206ENST00000439487 AEBP2Q6ZN18 517 aaPredicted RBP31.34■■■□□ 2.61
SEMA3B-206ENST00000439487 WDR7Q9Y4E6 1490 aa31.33■■■□□ 2.61
SEMA3B-206ENST00000439487 ATP1B4Q9UN42 357 aaPredicted RBP31.33■■■□□ 2.61
SEMA3B-206ENST00000439487 TSPOAP1O95153 1857 aa31.32■■■□□ 2.6
SEMA3B-206ENST00000439487 HECW1Q76N89 1606 aa31.31■■■□□ 2.6
SEMA3B-206ENST00000439487 EPRSP07814 1512 aaKnown RBP31.3■■■□□ 2.6
SEMA3B-206ENST00000439487 GLI2P10070 1586 aa31.28■■■□□ 2.6
SEMA3B-206ENST00000439487 KCNH8Q96L42 1107 aa31.27■■■□□ 2.6
SEMA3B-206ENST00000439487 LRRIQ1Q96JM4 1722 aa31.27■■■□□ 2.6
SEMA3B-206ENST00000439487 PCF11O94913 1555 aaKnown RBP31.26■■■□□ 2.6
SEMA3B-206ENST00000439487 CDK13Q14004 1512 aaKnown RBP31.26■■■□□ 2.59
SEMA3B-206ENST00000439487 CASKIN1Q8WXD9 1431 aa31.23■■■□□ 2.59
SEMA3B-206ENST00000439487 MAP3K4Q9Y6R4 1608 aa31.17■■■□□ 2.58
SEMA3B-206ENST00000439487 PLEKHD1A6NEE1 506 aa31.16■■■□□ 2.58
SEMA3B-206ENST00000439487 FYCO1Q9BQS8 1478 aa31.15■■■□□ 2.58
SEMA3B-206ENST00000439487 PPRC1Q5VV67 1664 aaKnown RBP31.14■■■□□ 2.58
SEMA3B-206ENST00000439487 CFAP43Q8NDM7 1665 aa31.13■■■□□ 2.57
SEMA3B-206ENST00000439487 CCDC18Q5T9S5 1454 aa31.08■■■□□ 2.57
SEMA3B-206ENST00000439487 ABCA9Q8IUA7 1624 aa31.06■■■□□ 2.56
SEMA3B-206ENST00000439487 CD109Q6YHK3 1445 aa31.05■■■□□ 2.56
SEMA3B-206ENST00000439487 CDK11AQ9UQ88 783 aaPredicted RBP31.04■■■□□ 2.56
SEMA3B-206ENST00000439487 VPS8Q8N3P4 1428 aa30.98■■■□□ 2.55
SEMA3B-206ENST00000439487 TROQ12816 1431 aaPredicted RBP30.97■■■□□ 2.55
SEMA3B-206ENST00000439487 TEX14Q8IWB6 1497 aa30.96■■■□□ 2.55
SEMA3B-206ENST00000439487 MAGI3Q5TCQ9 1506 aa30.96■■■□□ 2.55
SEMA3B-206ENST00000439487 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.96■■■□□ 2.55
SEMA3B-206ENST00000439487 TTC37Q6PGP7 1564 aa30.94■■■□□ 2.54
SEMA3B-206ENST00000439487 KIF14Q15058 1648 aa30.94■■■□□ 2.54
SEMA3B-206ENST00000439487 KDM6BO15054 1643 aa30.91■■■□□ 2.54
SEMA3B-206ENST00000439487 MYO5CQ9NQX4 1742 aa30.83■■■□□ 2.53
SEMA3B-206ENST00000439487 TIAM1Q13009 1591 aa30.79■■■□□ 2.52
SEMA3B-206ENST00000439487 COL17A1Q9UMD9 1497 aaPredicted RBP30.79■■■□□ 2.52
SEMA3B-206ENST00000439487 MTUS2Q5JR59 1369 aa30.79■■■□□ 2.52
SEMA3B-206ENST00000439487 PLCH2O75038 1416 aa30.75■■■□□ 2.51
SEMA3B-206ENST00000439487 NEO1Q92859 1461 aa30.75■■■□□ 2.51
SEMA3B-206ENST00000439487 EHBP1L1Q8N3D4 1523 aa30.73■■■□□ 2.51
SEMA3B-206ENST00000439487 CDC42BPBQ9Y5S2 1711 aa30.73■■■□□ 2.51
SEMA3B-206ENST00000439487 CFAP74Q9C0B2 1584 aa30.72■■■□□ 2.51
SEMA3B-206ENST00000439487 FANCAO15360 1455 aa30.72■■■□□ 2.51
SEMA3B-206ENST00000439487 CDC42BPAQ5VT25 1732 aa30.71■■■□□ 2.51
SEMA3B-206ENST00000439487 PHLDB1Q86UU1 1377 aa30.7■■■□□ 2.51
SEMA3B-206ENST00000439487 ARAP3Q8WWN8 1544 aa30.69■■■□□ 2.5
SEMA3B-206ENST00000439487 MAP3K1Q13233 1512 aa30.68■■■□□ 2.5
SEMA3B-206ENST00000439487 AKNAQ7Z591 1439 aa30.68■■■□□ 2.5
SEMA3B-206ENST00000439487 PREX2Q70Z35 1606 aa30.67■■■□□ 2.5
SEMA3B-206ENST00000439487 ARHGAP5Q13017 1502 aa30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms