RNA–Protein interactions for RNA: ENST00000439445.5

CCDC66-207, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 709 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-207ENST00000439445 GAPVD1Q14C86 1478 aa17.71■□□□□ 0.43
CCDC66-207ENST00000439445 PBRM1Q86U86 1689 aa17.67■□□□□ 0.42
CCDC66-207ENST00000439445 ABCA10Q8WWZ4 1543 aa17.66■□□□□ 0.42
CCDC66-207ENST00000439445 DCAF8L1A6NGE4 600 aa17.64■□□□□ 0.41
CCDC66-207ENST00000439445 ABCA5Q8WWZ7 1642 aa17.62■□□□□ 0.41
CCDC66-207ENST00000439445 WRNQ14191 1432 aaPredicted RBP eCLIP17.6■□□□□ 0.41
CCDC66-207ENST00000439445 NPM3O75607 178 aaKnown RBP17.56■□□□□ 0.4
CCDC66-207ENST00000439445 GRIN2AQ12879 1464 aa17.54■□□□□ 0.4
CCDC66-207ENST00000439445 TOP2BQ02880 1626 aa17.52■□□□□ 0.4
CCDC66-207ENST00000439445 BIVM-ERCC5R4GMW8 1640 aa17.51■□□□□ 0.39
CCDC66-207ENST00000439445 ADAMTS12P58397 1594 aa17.49■□□□□ 0.39
CCDC66-207ENST00000439445 KCNA4P22459 653 aa17.49■□□□□ 0.39
CCDC66-207ENST00000439445 ERCC6L2Q5T890 1561 aa17.49■□□□□ 0.39
CCDC66-207ENST00000439445 FHAD1B1AJZ9 1412 aa17.48■□□□□ 0.39
CCDC66-207ENST00000439445 CEP170Q5SW79 1584 aa17.48■□□□□ 0.39
CCDC66-207ENST00000439445 NUP160Q12769 1436 aa17.47■□□□□ 0.39
CCDC66-207ENST00000439445 ERICH3Q5RHP9 1530 aa17.43■□□□□ 0.38
CCDC66-207ENST00000439445 SHROOM2Q13796 1616 aa17.39■□□□□ 0.37
CCDC66-207ENST00000439445 JPH4Q96JJ6 628 aa17.38■□□□□ 0.37
CCDC66-207ENST00000439445 PRG4Q92954 1404 aaPredicted RBP17.36■□□□□ 0.37
CCDC66-207ENST00000439445 NPM1P06748 294 aaKnown RBP eCLIP17.26■□□□□ 0.35
CCDC66-207ENST00000439445 RUSC2Q8N2Y8 1516 aa17.25■□□□□ 0.35
CCDC66-207ENST00000439445 IGF1RP08069 1367 aa17.23■□□□□ 0.35
CCDC66-207ENST00000439445 KIF13AQ9H1H9 1805 aa17.23■□□□□ 0.35
CCDC66-207ENST00000439445 KIF27Q86VH2 1401 aa17.21■□□□□ 0.35
CCDC66-207ENST00000439445 FAM69CQ0P6D2 419 aa17.2■□□□□ 0.34
CCDC66-207ENST00000439445 KIAA0586Q9BVV6 1533 aa17.19■□□□□ 0.34
CCDC66-207ENST00000439445 ABCC10Q5T3U5 1492 aa17.15■□□□□ 0.34
CCDC66-207ENST00000439445 CUL7Q14999 1698 aa17.15■□□□□ 0.34
CCDC66-207ENST00000439445 ADCY10Q96PN6 1610 aa17.13■□□□□ 0.33
CCDC66-207ENST00000439445 MAPKBP1O60336 1514 aa17.12■□□□□ 0.33
CCDC66-207ENST00000439445 TTBK1Q5TCY1 1321 aaPredicted RBP17.12■□□□□ 0.33
CCDC66-207ENST00000439445 CARMIL1Q5VZK9 1371 aa17.12■□□□□ 0.33
CCDC66-207ENST00000439445 RNF39Q9H2S5 420 aa17.11■□□□□ 0.33
CCDC66-207ENST00000439445 PTPRGP23470 1445 aa17.09■□□□□ 0.33
CCDC66-207ENST00000439445 DIP2BQ9P265 1576 aa17.08■□□□□ 0.32
CCDC66-207ENST00000439445 CARMIL2Q6F5E8 1435 aa17.04■□□□□ 0.32
CCDC66-207ENST00000439445 TSPOAP1O95153 1857 aa17.03■□□□□ 0.32
CCDC66-207ENST00000439445 TNIKQ9UKE5 1360 aa17.02■□□□□ 0.32
CCDC66-207ENST00000439445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.02■□□□□ 0.32
CCDC66-207ENST00000439445 CACNB1Q02641 598 aaPredicted RBP17■□□□□ 0.31
CCDC66-207ENST00000439445 KDM6BO15054 1643 aa16.99■□□□□ 0.31
CCDC66-207ENST00000439445 IQGAP2Q13576 1575 aa16.99■□□□□ 0.31
CCDC66-207ENST00000439445 ABCC2Q92887 1545 aa16.97■□□□□ 0.31
CCDC66-207ENST00000439445 ASXL2Q76L83 1435 aa16.94■□□□□ 0.3
CCDC66-207ENST00000439445 PLB1Q6P1J6 1458 aa16.93■□□□□ 0.3
CCDC66-207ENST00000439445 UACAQ9BZF9 1416 aa16.93■□□□□ 0.3
CCDC66-207ENST00000439445 RAPGEF2Q9Y4G8 1499 aa16.93■□□□□ 0.3
CCDC66-207ENST00000439445 DISP1Q96F81 1524 aa16.92■□□□□ 0.3
CCDC66-207ENST00000439445 UHRF1BP1LA0JNW5 1464 aa16.91■□□□□ 0.3
CCDC66-207ENST00000439445 KDM4FA0A1W2PPD8 638 aa16.9■□□□□ 0.3
CCDC66-207ENST00000439445 C1QBPQ07021 282 aaKnown RBP16.9■□□□□ 0.3
CCDC66-207ENST00000439445 UGGT2Q9NYU1 1516 aa16.87■□□□□ 0.29
CCDC66-207ENST00000439445 GLI2P10070 1586 aa16.87■□□□□ 0.29
CCDC66-207ENST00000439445 KDM5BQ9UGL1 1544 aa16.85■□□□□ 0.29
CCDC66-207ENST00000439445 PPRC1Q5VV67 1664 aaKnown RBP16.83■□□□□ 0.28
CCDC66-207ENST00000439445 KIAA0556O60303 1618 aa16.82■□□□□ 0.28
CCDC66-207ENST00000439445 EPRSP07814 1512 aaKnown RBP16.82■□□□□ 0.28
CCDC66-207ENST00000439445 ZCCHC11Q5TAX3 1644 aaKnown RBP16.81■□□□□ 0.28
CCDC66-207ENST00000439445 MAP3K4Q9Y6R4 1608 aa16.78■□□□□ 0.28
CCDC66-207ENST00000439445 CTTNBP2Q8WZ74 1663 aa16.77■□□□□ 0.28
CCDC66-207ENST00000439445 TEX14Q8IWB6 1497 aa16.76■□□□□ 0.27
CCDC66-207ENST00000439445 COL17A1Q9UMD9 1497 aaPredicted RBP16.76■□□□□ 0.27
CCDC66-207ENST00000439445 GOLGA3Q08378 1498 aa16.75■□□□□ 0.27
CCDC66-207ENST00000439445 KCNH8Q96L42 1107 aa16.74■□□□□ 0.27
CCDC66-207ENST00000439445 WDR7Q9Y4E6 1490 aa16.73■□□□□ 0.27
CCDC66-207ENST00000439445 ADGRL1O94910 1474 aa16.71■□□□□ 0.27
CCDC66-207ENST00000439445 PRXQ9BXM0 1461 aa16.7■□□□□ 0.26
CCDC66-207ENST00000439445 FAM9AQ8IZU1 332 aaPredicted RBP16.7■□□□□ 0.26
CCDC66-207ENST00000439445 ABCA8O94911 1581 aa16.69■□□□□ 0.26
CCDC66-207ENST00000439445 CD109Q6YHK3 1445 aa16.69■□□□□ 0.26
CCDC66-207ENST00000439445 P3H3Q8IVL6 736 aa16.68■□□□□ 0.26
CCDC66-207ENST00000439445 SLC4A2P04920 1241 aa16.67■□□□□ 0.26
CCDC66-207ENST00000439445 U3KPZ7 1027 aaPredicted RBP16.67■□□□□ 0.26
CCDC66-207ENST00000439445 ARID3CA6NKF2 412 aa16.66■□□□□ 0.26
CCDC66-207ENST00000439445 CFAP43Q8NDM7 1665 aa16.64■□□□□ 0.25
CCDC66-207ENST00000439445 MAGI3Q5TCQ9 1506 aa16.64■□□□□ 0.25
CCDC66-207ENST00000439445 CSRNP3Q8WYN3 585 aa16.62■□□□□ 0.25
CCDC66-207ENST00000439445 SLC4A1APQ9BWU0 796 aaKnown RBP16.61■□□□□ 0.25
CCDC66-207ENST00000439445 ATP10BO94823 1461 aa16.59■□□□□ 0.25
CCDC66-207ENST00000439445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.56■□□□□ 0.24
CCDC66-207ENST00000439445 HNRNPUL2Q1KMD3 747 aaKnown RBP16.56■□□□□ 0.24
CCDC66-207ENST00000439445 RANGAP1P46060 587 aaPredicted RBP16.54■□□□□ 0.24
CCDC66-207ENST00000439445 ILDR1Q86SU0 546 aaPredicted RBP16.53■□□□□ 0.24
CCDC66-207ENST00000439445 ARAP3Q8WWN8 1544 aa16.52■□□□□ 0.24
CCDC66-207ENST00000439445 SAMD9Q5K651 1589 aa16.51■□□□□ 0.23
CCDC66-207ENST00000439445 HECW2Q9P2P5 1572 aa16.51■□□□□ 0.23
CCDC66-207ENST00000439445 RAPGEF6Q8TEU7 1601 aa16.49■□□□□ 0.23
CCDC66-207ENST00000439445 PHLDB1Q86UU1 1377 aa16.49■□□□□ 0.23
CCDC66-207ENST00000439445 KIF21BO75037 1637 aa16.48■□□□□ 0.23
CCDC66-207ENST00000439445 ABCA9Q8IUA7 1624 aa16.48■□□□□ 0.23
CCDC66-207ENST00000439445 RAPGEF3O95398 923 aa16.48■□□□□ 0.23
CCDC66-207ENST00000439445 EEA1Q15075 1411 aa16.46■□□□□ 0.23
CCDC66-207ENST00000439445 NUP153P49790 1475 aaKnown RBP16.44■□□□□ 0.22
CCDC66-207ENST00000439445 PLEKHD1A6NEE1 506 aa16.44■□□□□ 0.22
CCDC66-207ENST00000439445 FHOD3Q2V2M9 1422 aa16.44■□□□□ 0.22
CCDC66-207ENST00000439445 NEO1Q92859 1461 aa16.43■□□□□ 0.22
CCDC66-207ENST00000439445 ARID4BQ4LE39 1312 aaPredicted RBP16.41■□□□□ 0.22
CCDC66-207ENST00000439445 PTPRMP28827 1452 aa16.35■□□□□ 0.21
CCDC66-207ENST00000439445 ADAMTSL3P82987 1691 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms