RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 FGD5Q6ZNL6 1462 aa22.12■■□□□ 1.13
RTN4-211ENST00000438462 GRIN2AQ12879 1464 aa22.05■■□□□ 1.12
RTN4-211ENST00000438462 NUP160Q12769 1436 aa22.02■■□□□ 1.12
RTN4-211ENST00000438462 NPM1P06748 294 aaKnown RBP eCLIP21.99■■□□□ 1.11
RTN4-211ENST00000438462 ADCY10Q96PN6 1610 aa21.98■■□□□ 1.11
RTN4-211ENST00000438462 PPRC1Q5VV67 1664 aaKnown RBP21.95■■□□□ 1.1
RTN4-211ENST00000438462 SPATA31D1Q6ZQQ2 1576 aa21.95■■□□□ 1.1
RTN4-211ENST00000438462 TOP2BQ02880 1626 aa21.94■■□□□ 1.1
RTN4-211ENST00000438462 ABCA5Q8WWZ7 1642 aa21.94■■□□□ 1.1
RTN4-211ENST00000438462 PRG4Q92954 1404 aaPredicted RBP21.91■■□□□ 1.1
RTN4-211ENST00000438462 ADAMTS12P58397 1594 aa21.91■■□□□ 1.1
RTN4-211ENST00000438462 CUX1P39880 1505 aa21.85■■□□□ 1.09
RTN4-211ENST00000438462 COL17A1Q9UMD9 1497 aaPredicted RBP21.83■■□□□ 1.09
RTN4-211ENST00000438462 ABCA10Q8WWZ4 1543 aa21.75■■□□□ 1.07
RTN4-211ENST00000438462 GLI2P10070 1586 aa21.71■■□□□ 1.07
RTN4-211ENST00000438462 JPH4Q96JJ6 628 aa21.68■■□□□ 1.06
RTN4-211ENST00000438462 PCF11O94913 1555 aaKnown RBP21.66■■□□□ 1.06
RTN4-211ENST00000438462 CERKQ8TCT0 537 aa21.66■■□□□ 1.06
RTN4-211ENST00000438462 FHAD1B1AJZ9 1412 aa21.65■■□□□ 1.06
RTN4-211ENST00000438462 RUSC2Q8N2Y8 1516 aa21.65■■□□□ 1.06
RTN4-211ENST00000438462 KIF21BO75037 1637 aa21.63■■□□□ 1.05
RTN4-211ENST00000438462 MAP3K4Q9Y6R4 1608 aa21.6■■□□□ 1.05
RTN4-211ENST00000438462 PTPRMP28827 1452 aa21.58■■□□□ 1.04
RTN4-211ENST00000438462 TEX14Q8IWB6 1497 aa21.58■■□□□ 1.04
RTN4-211ENST00000438462 ASXL2Q76L83 1435 aa21.56■■□□□ 1.04
RTN4-211ENST00000438462 PLB1Q6P1J6 1458 aa21.54■■□□□ 1.04
RTN4-211ENST00000438462 CUL7Q14999 1698 aa21.5■■□□□ 1.03
RTN4-211ENST00000438462 ADAMTSL3P82987 1691 aa21.48■■□□□ 1.03
RTN4-211ENST00000438462 ABCC2Q92887 1545 aa21.48■■□□□ 1.03
RTN4-211ENST00000438462 ERICH3Q5RHP9 1530 aa21.45■■□□□ 1.02
RTN4-211ENST00000438462 EPRSP07814 1512 aaKnown RBP21.44■■□□□ 1.02
RTN4-211ENST00000438462 KIAA0586Q9BVV6 1533 aa21.39■■□□□ 1.01
RTN4-211ENST00000438462 HSPA2P54652 639 aa21.37■■□□□ 1.01
RTN4-211ENST00000438462 MADDQ8WXG6 1647 aa21.35■■□□□ 1.01
RTN4-211ENST00000438462 PTPRGP23470 1445 aa21.32■■□□□ 1
RTN4-211ENST00000438462 TTBK1Q5TCY1 1321 aaPredicted RBP21.29■■□□□ 1
RTN4-211ENST00000438462 WRNQ14191 1432 aaPredicted RBP eCLIP21.29■■□□□ 1
RTN4-211ENST00000438462 BCORL1Q5H9F3 1711 aa21.28■■□□□ 1
RTN4-211ENST00000438462 RIMS1Q86UR5 1692 aaKnown RBP21.24■□□□□ 0.99
RTN4-211ENST00000438462 UHRF1BP1LA0JNW5 1464 aa21.23■□□□□ 0.99
RTN4-211ENST00000438462 ZCCHC11Q5TAX3 1644 aaKnown RBP21.21■□□□□ 0.99
RTN4-211ENST00000438462 MAGI3Q5TCQ9 1506 aa21.18■□□□□ 0.98
RTN4-211ENST00000438462 KDM5BQ9UGL1 1544 aa21.17■□□□□ 0.98
RTN4-211ENST00000438462 CFAP43Q8NDM7 1665 aa21.16■□□□□ 0.98
RTN4-211ENST00000438462 TNIKQ9UKE5 1360 aa21.16■□□□□ 0.98
RTN4-211ENST00000438462 UACAQ9BZF9 1416 aa21.12■□□□□ 0.97
RTN4-211ENST00000438462 WDR7Q9Y4E6 1490 aa21.11■□□□□ 0.97
RTN4-211ENST00000438462 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
RTN4-211ENST00000438462 CD109Q6YHK3 1445 aa21.1■□□□□ 0.97
RTN4-211ENST00000438462 PLPPR3Q6T4P5 718 aa21.06■□□□□ 0.96
RTN4-211ENST00000438462 CARMIL2Q6F5E8 1435 aa21.05■□□□□ 0.96
RTN4-211ENST00000438462 ARAP3Q8WWN8 1544 aa21.05■□□□□ 0.96
RTN4-211ENST00000438462 MED1Q15648 1581 aaPredicted RBP21.03■□□□□ 0.96
RTN4-211ENST00000438462 ARID4BQ4LE39 1312 aaPredicted RBP21.03■□□□□ 0.96
RTN4-211ENST00000438462 STRCQ7RTU9 1775 aa21.02■□□□□ 0.96
RTN4-211ENST00000438462 IQSEC2Q5JU85 1478 aa20.98■□□□□ 0.95
RTN4-211ENST00000438462 YEATS2Q9ULM3 1422 aa20.97■□□□□ 0.95
RTN4-211ENST00000438462 PREX1Q8TCU6 1659 aa20.95■□□□□ 0.94
RTN4-211ENST00000438462 LTBP4Q8N2S1 1624 aa20.94■□□□□ 0.94
RTN4-211ENST00000438462 DMRT2Q9Y5R5 561 aa20.91■□□□□ 0.94
RTN4-211ENST00000438462 FRMPD1Q5SYB0 1578 aa20.9■□□□□ 0.94
RTN4-211ENST00000438462 ARHGEF40Q8TER5 1519 aa20.88■□□□□ 0.93
RTN4-211ENST00000438462 IQGAP2Q13576 1575 aa20.87■□□□□ 0.93
RTN4-211ENST00000438462 DISP1Q96F81 1524 aa20.87■□□□□ 0.93
RTN4-211ENST00000438462 TTC37Q6PGP7 1564 aa20.86■□□□□ 0.93
RTN4-211ENST00000438462 KCNH8Q96L42 1107 aa20.86■□□□□ 0.93
RTN4-211ENST00000438462 FER1L4A9Z1Z3 1794 aa20.86■□□□□ 0.93
RTN4-211ENST00000438462 RAPGEF3O95398 923 aa20.85■□□□□ 0.93
RTN4-211ENST00000438462 PTPRTO14522 1441 aa20.81■□□□□ 0.92
RTN4-211ENST00000438462 SIGLEC1Q9BZZ2 1709 aa20.8■□□□□ 0.92
RTN4-211ENST00000438462 FANCAO15360 1455 aa20.76■□□□□ 0.91
RTN4-211ENST00000438462 UBAP1LF5GYI3 381 aa20.76■□□□□ 0.91
RTN4-211ENST00000438462 POGZQ7Z3K3 1410 aa20.76■□□□□ 0.91
RTN4-211ENST00000438462 PHF23Q9BUL5 403 aaPredicted RBP20.75■□□□□ 0.91
RTN4-211ENST00000438462 PHLDB1Q86UU1 1377 aa20.74■□□□□ 0.91
RTN4-211ENST00000438462 KIAA0556O60303 1618 aa20.74■□□□□ 0.91
RTN4-211ENST00000438462 IGF1RP08069 1367 aa20.7■□□□□ 0.9
RTN4-211ENST00000438462 NEO1Q92859 1461 aa20.69■□□□□ 0.9
RTN4-211ENST00000438462 ABCA9Q8IUA7 1624 aa20.68■□□□□ 0.9
RTN4-211ENST00000438462 UHRF1BP1Q6BDS2 1440 aa20.68■□□□□ 0.9
RTN4-211ENST00000438462 RICTORQ6R327 1708 aa20.66■□□□□ 0.9
RTN4-211ENST00000438462 HSPA1LP34931 641 aa20.65■□□□□ 0.9
RTN4-211ENST00000438462 UGGT2Q9NYU1 1516 aa20.64■□□□□ 0.9
RTN4-211ENST00000438462 MLECQ14165 292 aa20.63■□□□□ 0.89
RTN4-211ENST00000438462 AKNAQ7Z591 1439 aa20.62■□□□□ 0.89
RTN4-211ENST00000438462 ABCA8O94911 1581 aa20.61■□□□□ 0.89
RTN4-211ENST00000438462 ARHGEF12Q9NZN5 1544 aa20.59■□□□□ 0.89
RTN4-211ENST00000438462 CEBPAP49715 358 aaPredicted RBP20.58■□□□□ 0.89
RTN4-211ENST00000438462 ZFYVE16Q7Z3T8 1539 aa20.58■□□□□ 0.88
RTN4-211ENST00000438462 EFCAB5A4FU69 1503 aa20.55■□□□□ 0.88
RTN4-211ENST00000438462 SCAF1Q9H7N4 1312 aaKnown RBP20.54■□□□□ 0.88
RTN4-211ENST00000438462 ZMYM4Q5VZL5 1548 aa20.54■□□□□ 0.88
RTN4-211ENST00000438462 CARMIL1Q5VZK9 1371 aa20.54■□□□□ 0.88
RTN4-211ENST00000438462 NCOA1Q15788 1441 aa20.53■□□□□ 0.88
RTN4-211ENST00000438462 KIF27Q86VH2 1401 aa20.53■□□□□ 0.88
RTN4-211ENST00000438462 DENND4BO75064 1496 aaPredicted RBP20.53■□□□□ 0.88
RTN4-211ENST00000438462 ZNF335Q9H4Z2 1342 aaPredicted RBP20.52■□□□□ 0.87
RTN4-211ENST00000438462 FHOD3Q2V2M9 1422 aa20.5■□□□□ 0.87
RTN4-211ENST00000438462 SETD1BQ9UPS6 1966 aaKnown RBP20.5■□□□□ 0.87
RTN4-211ENST00000438462 PIP4K2BP78356 416 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms