RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 CHMP7Q8WUX9 453 aaPredicted RBP14.91□□□□□ -0.02
HERPUD2-206ENST00000438224 TRIM41Q8WV44 630 aa14.91□□□□□ -0.02
HERPUD2-206ENST00000438224 GRIN2AQ12879 1464 aa14.89□□□□□ -0.03
HERPUD2-206ENST00000438224 CEP170Q5SW79 1584 aa14.87□□□□□ -0.03
HERPUD2-206ENST00000438224 ARAP1Q96P48 1450 aa14.86□□□□□ -0.03
HERPUD2-206ENST00000438224 FHAD1B1AJZ9 1412 aa14.85□□□□□ -0.03
HERPUD2-206ENST00000438224 NUP160Q12769 1436 aa14.83□□□□□ -0.03
HERPUD2-206ENST00000438224 ERCC6L2Q5T890 1561 aa14.8□□□□□ -0.04
HERPUD2-206ENST00000438224 SHROOM2Q13796 1616 aa14.79□□□□□ -0.04
HERPUD2-206ENST00000438224 KIF27Q86VH2 1401 aa14.79□□□□□ -0.04
HERPUD2-206ENST00000438224 CUL7Q14999 1698 aa14.77□□□□□ -0.04
HERPUD2-206ENST00000438224 IGF1RP08069 1367 aa14.77□□□□□ -0.04
HERPUD2-206ENST00000438224 RUSC2Q8N2Y8 1516 aa14.76□□□□□ -0.05
HERPUD2-206ENST00000438224 CYB5RLQ6IPT4 315 aa14.75□□□□□ -0.05
HERPUD2-206ENST00000438224 CARMIL1Q5VZK9 1371 aa14.67□□□□□ -0.06
HERPUD2-206ENST00000438224 KIAA0586Q9BVV6 1533 aa14.63□□□□□ -0.07
HERPUD2-206ENST00000438224 PPP4R3CPQ6ZMV5 832 aa14.63□□□□□ -0.07
HERPUD2-206ENST00000438224 PRG4Q92954 1404 aaPredicted RBP14.63□□□□□ -0.07
HERPUD2-206ENST00000438224 JPH4Q96JJ6 628 aa14.61□□□□□ -0.07
HERPUD2-206ENST00000438224 RAPGEF2Q9Y4G8 1499 aa14.57□□□□□ -0.08
HERPUD2-206ENST00000438224 IQGAP2Q13576 1575 aa14.57□□□□□ -0.08
HERPUD2-206ENST00000438224 NCBP3Q53F19 620 aaKnown RBP14.57□□□□□ -0.08
HERPUD2-206ENST00000438224 CTTNBP2Q8WZ74 1663 aa14.55□□□□□ -0.08
HERPUD2-206ENST00000438224 PRXQ9BXM0 1461 aa14.53□□□□□ -0.08
HERPUD2-206ENST00000438224 SLC24A1O60721 1099 aa14.51□□□□□ -0.09
HERPUD2-206ENST00000438224 ADCY10Q96PN6 1610 aa14.51□□□□□ -0.09
HERPUD2-206ENST00000438224 DISP1Q96F81 1524 aa14.49□□□□□ -0.09
HERPUD2-206ENST00000438224 UGGT2Q9NYU1 1516 aa14.48□□□□□ -0.09
HERPUD2-206ENST00000438224 KIF13AQ9H1H9 1805 aa14.46□□□□□ -0.09
HERPUD2-206ENST00000438224 TRHP20396 242 aaPredicted RBP14.46□□□□□ -0.09
HERPUD2-206ENST00000438224 KIAA0556O60303 1618 aa14.45□□□□□ -0.1
HERPUD2-206ENST00000438224 CARMIL2Q6F5E8 1435 aa14.41□□□□□ -0.1
HERPUD2-206ENST00000438224 TNIKQ9UKE5 1360 aa14.41□□□□□ -0.1
HERPUD2-206ENST00000438224 PTPRGP23470 1445 aa14.41□□□□□ -0.1
HERPUD2-206ENST00000438224 EEA1Q15075 1411 aa14.41□□□□□ -0.1
HERPUD2-206ENST00000438224 TTBK1Q5TCY1 1321 aaPredicted RBP14.39□□□□□ -0.11
HERPUD2-206ENST00000438224 MAPKBP1O60336 1514 aa14.38□□□□□ -0.11
HERPUD2-206ENST00000438224 FAM9AQ8IZU1 332 aaPredicted RBP14.37□□□□□ -0.11
HERPUD2-206ENST00000438224 KIF21BO75037 1637 aa14.37□□□□□ -0.11
HERPUD2-206ENST00000438224 DIP2BQ9P265 1576 aa14.35□□□□□ -0.11
HERPUD2-206ENST00000438224 NPM3O75607 178 aaKnown RBP14.35□□□□□ -0.11
HERPUD2-206ENST00000438224 ABCC2Q92887 1545 aa14.35□□□□□ -0.11
HERPUD2-206ENST00000438224 UHRF1BP1LA0JNW5 1464 aa14.34□□□□□ -0.11
HERPUD2-206ENST00000438224 SAMD9Q5K651 1589 aa14.33□□□□□ -0.12
HERPUD2-206ENST00000438224 UACAQ9BZF9 1416 aa14.32□□□□□ -0.12
HERPUD2-206ENST00000438224 GOLGA3Q08378 1498 aa14.31□□□□□ -0.12
HERPUD2-206ENST00000438224 ABCC10Q5T3U5 1492 aa14.31□□□□□ -0.12
HERPUD2-206ENST00000438224 ZCCHC11Q5TAX3 1644 aaKnown RBP14.31□□□□□ -0.12
HERPUD2-206ENST00000438224 ABCA8O94911 1581 aa14.3□□□□□ -0.12
HERPUD2-206ENST00000438224 PLB1Q6P1J6 1458 aa14.3□□□□□ -0.12
HERPUD2-206ENST00000438224 KDM5BQ9UGL1 1544 aa14.29□□□□□ -0.12
HERPUD2-206ENST00000438224 TSPOAP1O95153 1857 aa14.29□□□□□ -0.12
HERPUD2-206ENST00000438224 NPM1P06748 294 aaKnown RBP eCLIP14.27□□□□□ -0.13
HERPUD2-206ENST00000438224 ASXL2Q76L83 1435 aa14.26□□□□□ -0.13
HERPUD2-206ENST00000438224 ZBTB22O15209 634 aa14.25□□□□□ -0.13
HERPUD2-206ENST00000438224 PPRC1Q5VV67 1664 aaKnown RBP14.24□□□□□ -0.13
HERPUD2-206ENST00000438224 P3H3Q8IVL6 736 aa14.24□□□□□ -0.13
HERPUD2-206ENST00000438224 FAM69CQ0P6D2 419 aa14.23□□□□□ -0.13
HERPUD2-206ENST00000438224 GLI2P10070 1586 aa14.21□□□□□ -0.14
HERPUD2-206ENST00000438224 FHOD3Q2V2M9 1422 aa14.2□□□□□ -0.14
HERPUD2-206ENST00000438224 RAPGEF6Q8TEU7 1601 aa14.19□□□□□ -0.14
HERPUD2-206ENST00000438224 RANGAP1P46060 587 aaPredicted RBP14.19□□□□□ -0.14
HERPUD2-206ENST00000438224 EPRSP07814 1512 aaKnown RBP14.19□□□□□ -0.14
HERPUD2-206ENST00000438224 MAP3K4Q9Y6R4 1608 aa14.19□□□□□ -0.14
HERPUD2-206ENST00000438224 AMER1Q5JTC6 1135 aaPredicted RBP14.18□□□□□ -0.14
HERPUD2-206ENST00000438224 EFCAB5A4FU69 1503 aa14.17□□□□□ -0.14
HERPUD2-206ENST00000438224 WDR7Q9Y4E6 1490 aa14.17□□□□□ -0.14
HERPUD2-206ENST00000438224 RTN4Q9NQC3 1192 aaKnown RBP14.16□□□□□ -0.14
HERPUD2-206ENST00000438224 MAPK8IP2Q13387 824 aaPredicted RBP14.15□□□□□ -0.14
HERPUD2-206ENST00000438224 ATP10BO94823 1461 aa14.14□□□□□ -0.15
HERPUD2-206ENST00000438224 NUP153P49790 1475 aaKnown RBP14.14□□□□□ -0.15
HERPUD2-206ENST00000438224 ARHGAP35Q9NRY4 1499 aa14.12□□□□□ -0.15
HERPUD2-206ENST00000438224 ARID3CA6NKF2 412 aa14.12□□□□□ -0.15
HERPUD2-206ENST00000438224 UBTFP17480 764 aaKnown RBP14.12□□□□□ -0.15
HERPUD2-206ENST00000438224 KDM6BO15054 1643 aa14.12□□□□□ -0.15
HERPUD2-206ENST00000438224 CFAP43Q8NDM7 1665 aa14.1□□□□□ -0.15
HERPUD2-206ENST00000438224 LRRIQ1Q96JM4 1722 aa14.08□□□□□ -0.16
HERPUD2-206ENST00000438224 COL17A1Q9UMD9 1497 aaPredicted RBP14.06□□□□□ -0.16
HERPUD2-206ENST00000438224 ABCA9Q8IUA7 1624 aa14.05□□□□□ -0.16
HERPUD2-206ENST00000438224 DMRT2Q9Y5R5 561 aa14.05□□□□□ -0.16
HERPUD2-206ENST00000438224 CDK13Q14004 1512 aaKnown RBP14.05□□□□□ -0.16
HERPUD2-206ENST00000438224 KCNH8Q96L42 1107 aa14.04□□□□□ -0.16
HERPUD2-206ENST00000438224 MAGI3Q5TCQ9 1506 aa14.02□□□□□ -0.16
HERPUD2-206ENST00000438224 HECW1Q76N89 1606 aa14.01□□□□□ -0.17
HERPUD2-206ENST00000438224 TEX14Q8IWB6 1497 aa14.01□□□□□ -0.17
HERPUD2-206ENST00000438224 CD109Q6YHK3 1445 aa14.01□□□□□ -0.17
HERPUD2-206ENST00000438224 SCAF1Q9H7N4 1312 aaKnown RBP14.01□□□□□ -0.17
HERPUD2-206ENST00000438224 PCF11O94913 1555 aaKnown RBP14□□□□□ -0.17
HERPUD2-206ENST00000438224 CNKSR2Q8WXI2 1034 aa14□□□□□ -0.17
HERPUD2-206ENST00000438224 FMN1Q68DA7 1419 aa13.99□□□□□ -0.17
HERPUD2-206ENST00000438224 TTC37Q6PGP7 1564 aa13.98□□□□□ -0.17
HERPUD2-206ENST00000438224 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.96□□□□□ -0.17
HERPUD2-206ENST00000438224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.96□□□□□ -0.17
HERPUD2-206ENST00000438224 HNRNPUL2Q1KMD3 747 aaKnown RBP13.96□□□□□ -0.17
HERPUD2-206ENST00000438224 FOXD4L1Q9NU39 408 aa13.96□□□□□ -0.17
HERPUD2-206ENST00000438224 CLIP1P30622 1438 aa13.96□□□□□ -0.18
HERPUD2-206ENST00000438224 KIF14Q15058 1648 aa13.93□□□□□ -0.18
HERPUD2-206ENST00000438224 CASKIN1Q8WXD9 1431 aa13.91□□□□□ -0.18
HERPUD2-206ENST00000438224 ARAP3Q8WWN8 1544 aa13.91□□□□□ -0.18
HERPUD2-206ENST00000438224 PLEKHD1A6NEE1 506 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms