RNA–Protein interactions for RNA: ENST00000436778.5

NR1H3-209, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-209ENST00000436778 KIF21BO75037 1637 aa31.16■■■□□ 2.58
NR1H3-209ENST00000436778 ARHGEF11O15085 1522 aa31.13■■■□□ 2.57
NR1H3-209ENST00000436778 FAM9AQ8IZU1 332 aaPredicted RBP31.11■■■□□ 2.57
NR1H3-209ENST00000436778 RIMBP3CA6NJZ7 1639 aa31.07■■■□□ 2.56
NR1H3-209ENST00000436778 RIMBP3BA6NNM3 1639 aa31.07■■■□□ 2.56
NR1H3-209ENST00000436778 RIMBP3Q9UFD9 1639 aa31.07■■■□□ 2.56
NR1H3-209ENST00000436778 IQGAP2Q13576 1575 aa31.06■■■□□ 2.56
NR1H3-209ENST00000436778 JPH4Q96JJ6 628 aa31.04■■■□□ 2.56
NR1H3-209ENST00000436778 CTTNBP2Q8WZ74 1663 aa31.03■■■□□ 2.56
NR1H3-209ENST00000436778 GOLGA3Q08378 1498 aa30.96■■■□□ 2.55
NR1H3-209ENST00000436778 UGGT2Q9NYU1 1516 aa30.95■■■□□ 2.55
NR1H3-209ENST00000436778 PRG4Q92954 1404 aaPredicted RBP30.95■■■□□ 2.54
NR1H3-209ENST00000436778 ARAP1Q96P48 1450 aa30.9■■■□□ 2.54
NR1H3-209ENST00000436778 ERCC6L2Q5T890 1561 aa30.89■■■□□ 2.54
NR1H3-209ENST00000436778 CARMIL2Q6F5E8 1435 aa30.85■■■□□ 2.53
NR1H3-209ENST00000436778 DISP1Q96F81 1524 aa30.82■■■□□ 2.52
NR1H3-209ENST00000436778 KIAA0556O60303 1618 aa30.76■■■□□ 2.52
NR1H3-209ENST00000436778 TNIKQ9UKE5 1360 aa30.72■■■□□ 2.51
NR1H3-209ENST00000436778 UBTFP17480 764 aaKnown RBP30.72■■■□□ 2.51
NR1H3-209ENST00000436778 CYB5RLQ6IPT4 315 aa30.71■■■□□ 2.51
NR1H3-209ENST00000436778 SAMD9Q5K651 1589 aa30.7■■■□□ 2.5
NR1H3-209ENST00000436778 EFCAB5A4FU69 1503 aa30.65■■■□□ 2.5
NR1H3-209ENST00000436778 PTPRGP23470 1445 aa30.64■■■□□ 2.49
NR1H3-209ENST00000436778 EHMT2Q96KQ7 1210 aa30.56■■■□□ 2.48
NR1H3-209ENST00000436778 UHRF1BP1LA0JNW5 1464 aa30.5■■■□□ 2.47
NR1H3-209ENST00000436778 UACAQ9BZF9 1416 aa30.47■■■□□ 2.47
NR1H3-209ENST00000436778 ARHGAP35Q9NRY4 1499 aa30.47■■■□□ 2.47
NR1H3-209ENST00000436778 ADCY10Q96PN6 1610 aa30.46■■■□□ 2.47
NR1H3-209ENST00000436778 ABCC2Q92887 1545 aa30.44■■■□□ 2.46
NR1H3-209ENST00000436778 ABCA8O94911 1581 aa30.42■■■□□ 2.46
NR1H3-209ENST00000436778 FHOD3Q2V2M9 1422 aa30.42■■■□□ 2.46
NR1H3-209ENST00000436778 P3H3Q8IVL6 736 aa30.39■■■□□ 2.46
NR1H3-209ENST00000436778 RANGAP1P46060 587 aaPredicted RBP30.38■■■□□ 2.45
NR1H3-209ENST00000436778 CLIP1P30622 1438 aa30.38■■■□□ 2.45
NR1H3-209ENST00000436778 PLB1Q6P1J6 1458 aa30.37■■■□□ 2.45
NR1H3-209ENST00000436778 LOC105371045A0A1W2PR82 267 aa30.35■■■□□ 2.45
NR1H3-209ENST00000436778 FMN1Q68DA7 1419 aa30.34■■■□□ 2.45
NR1H3-209ENST00000436778 TTBK1Q5TCY1 1321 aaPredicted RBP30.34■■■□□ 2.45
NR1H3-209ENST00000436778 KDM5BQ9UGL1 1544 aa30.32■■■□□ 2.44
NR1H3-209ENST00000436778 CEP162Q5TB80 1403 aa30.31■■■□□ 2.44
NR1H3-209ENST00000436778 RAPGEF6Q8TEU7 1601 aa30.29■■■□□ 2.44
NR1H3-209ENST00000436778 MAPKBP1O60336 1514 aa30.29■■■□□ 2.44
NR1H3-209ENST00000436778 NPM1P06748 294 aaKnown RBP eCLIP30.29■■■□□ 2.44
NR1H3-209ENST00000436778 ZCCHC11Q5TAX3 1644 aaKnown RBP30.19■■■□□ 2.42
NR1H3-209ENST00000436778 NUP153P49790 1475 aaKnown RBP30.19■■■□□ 2.42
NR1H3-209ENST00000436778 HECW1Q76N89 1606 aa30.14■■■□□ 2.41
NR1H3-209ENST00000436778 ATP10BO94823 1461 aa30.13■■■□□ 2.41
NR1H3-209ENST00000436778 CASKIN1Q8WXD9 1431 aa30.12■■■□□ 2.41
NR1H3-209ENST00000436778 ASXL2Q76L83 1435 aa30.1■■■□□ 2.41
NR1H3-209ENST00000436778 FYCO1Q9BQS8 1478 aa30.08■■■□□ 2.41
NR1H3-209ENST00000436778 ABCC10Q5T3U5 1492 aa30.06■■■□□ 2.4
NR1H3-209ENST00000436778 PCF11O94913 1555 aaKnown RBP30.06■■■□□ 2.4
NR1H3-209ENST00000436778 WDR7Q9Y4E6 1490 aa30.04■■■□□ 2.4
NR1H3-209ENST00000436778 EPRSP07814 1512 aaKnown RBP30.03■■■□□ 2.4
NR1H3-209ENST00000436778 DIP2BQ9P265 1576 aa30.02■■■□□ 2.4
NR1H3-209ENST00000436778 CCDC18Q5T9S5 1454 aa29.99■■■□□ 2.39
NR1H3-209ENST00000436778 GLI2P10070 1586 aa29.98■■■□□ 2.39
NR1H3-209ENST00000436778 VPS8Q8N3P4 1428 aa29.97■■■□□ 2.39
NR1H3-209ENST00000436778 KIF13AQ9H1H9 1805 aa29.96■■■□□ 2.39
NR1H3-209ENST00000436778 TRHP20396 242 aaPredicted RBP29.94■■■□□ 2.38
NR1H3-209ENST00000436778 CDK13Q14004 1512 aaKnown RBP29.94■■■□□ 2.38
NR1H3-209ENST00000436778 LRRIQ1Q96JM4 1722 aa29.92■■■□□ 2.38
NR1H3-209ENST00000436778 ARID3CA6NKF2 412 aa29.9■■■□□ 2.38
NR1H3-209ENST00000436778 PLEKHD1A6NEE1 506 aa29.88■■■□□ 2.37
NR1H3-209ENST00000436778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.88■■■□□ 2.37
NR1H3-209ENST00000436778 HNRNPUL2Q1KMD3 747 aaKnown RBP29.88■■■□□ 2.37
NR1H3-209ENST00000436778 ATP1B4Q9UN42 357 aaPredicted RBP29.88■■■□□ 2.37
NR1H3-209ENST00000436778 CDK11AQ9UQ88 783 aaPredicted RBP29.88■■■□□ 2.37
NR1H3-209ENST00000436778 FAM69CQ0P6D2 419 aa29.87■■■□□ 2.37
NR1H3-209ENST00000436778 MAP3K4Q9Y6R4 1608 aa29.81■■■□□ 2.36
NR1H3-209ENST00000436778 TROQ12816 1431 aaPredicted RBP29.79■■■□□ 2.36
NR1H3-209ENST00000436778 CFAP43Q8NDM7 1665 aa29.79■■■□□ 2.36
NR1H3-209ENST00000436778 ABCA9Q8IUA7 1624 aa29.78■■■□□ 2.36
NR1H3-209ENST00000436778 MAP3K1Q13233 1512 aa29.77■■■□□ 2.36
NR1H3-209ENST00000436778 KCNH8Q96L42 1107 aa29.74■■■□□ 2.35
NR1H3-209ENST00000436778 MAGI3Q5TCQ9 1506 aa29.71■■■□□ 2.35
NR1H3-209ENST00000436778 TIAM1Q13009 1591 aa29.7■■■□□ 2.35
NR1H3-209ENST00000436778 KIF14Q15058 1648 aa29.7■■■□□ 2.34
NR1H3-209ENST00000436778 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.69■■■□□ 2.34
NR1H3-209ENST00000436778 CD109Q6YHK3 1445 aa29.69■■■□□ 2.34
NR1H3-209ENST00000436778 PPRC1Q5VV67 1664 aaKnown RBP29.67■■■□□ 2.34
NR1H3-209ENST00000436778 TEX14Q8IWB6 1497 aa29.66■■■□□ 2.34
NR1H3-209ENST00000436778 EHBP1L1Q8N3D4 1523 aa29.66■■■□□ 2.34
NR1H3-209ENST00000436778 MTUS2Q5JR59 1369 aa29.63■■■□□ 2.33
NR1H3-209ENST00000436778 TTC37Q6PGP7 1564 aa29.62■■■□□ 2.33
NR1H3-209ENST00000436778 ARAP3Q8WWN8 1544 aa29.6■■■□□ 2.33
NR1H3-209ENST00000436778 TSPOAP1O95153 1857 aa29.59■■■□□ 2.33
NR1H3-209ENST00000436778 LRRC9Q6ZRR7 1453 aa29.57■■■□□ 2.32
NR1H3-209ENST00000436778 PHLDB1Q86UU1 1377 aa29.55■■■□□ 2.32
NR1H3-209ENST00000436778 PLCH2O75038 1416 aa29.54■■■□□ 2.32
NR1H3-209ENST00000436778 APLP2Q06481 763 aa29.53■■■□□ 2.32
NR1H3-209ENST00000436778 NEO1Q92859 1461 aa29.53■■■□□ 2.32
NR1H3-209ENST00000436778 MYO5CQ9NQX4 1742 aa29.52■■■□□ 2.32
NR1H3-209ENST00000436778 CFAP74Q9C0B2 1584 aa29.5■■■□□ 2.31
NR1H3-209ENST00000436778 SUPT6HQ7KZ85 1726 aaKnown RBP29.48■■■□□ 2.31
NR1H3-209ENST00000436778 PREX2Q70Z35 1606 aa29.46■■■□□ 2.31
NR1H3-209ENST00000436778 FANCAO15360 1455 aa29.45■■■□□ 2.31
NR1H3-209ENST00000436778 NCOA2Q15596 1464 aa29.42■■■□□ 2.3
NR1H3-209ENST00000436778 GPATCH8Q9UKJ3 1502 aaKnown RBP29.42■■■□□ 2.3
NR1H3-209ENST00000436778 KANK4Q5T7N3 995 aaPredicted RBP29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms