RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 CTTNBP2Q8WZ74 1663 aa27.44■■□□□ 1.98
CALD1-209ENST00000436461 UBTFP17480 764 aaKnown RBP27.43■■□□□ 1.98
CALD1-209ENST00000436461 CLASP1Q7Z460 1538 aa27.41■■□□□ 1.98
CALD1-209ENST00000436461 KIAA0586Q9BVV6 1533 aa27.36■■□□□ 1.97
CALD1-209ENST00000436461 IQGAP2Q13576 1575 aa27.34■■□□□ 1.97
CALD1-209ENST00000436461 RANGAP1P46060 587 aaPredicted RBP27.3■■□□□ 1.96
CALD1-209ENST00000436461 JPH4Q96JJ6 628 aa27.25■■□□□ 1.95
CALD1-209ENST00000436461 SHROOM2Q13796 1616 aa27.25■■□□□ 1.95
CALD1-209ENST00000436461 TNIKQ9UKE5 1360 aa27.23■■□□□ 1.95
CALD1-209ENST00000436461 ERCC6L2Q5T890 1561 aa27.19■■□□□ 1.94
CALD1-209ENST00000436461 UGGT2Q9NYU1 1516 aa27.17■■□□□ 1.94
CALD1-209ENST00000436461 PRG4Q92954 1404 aaPredicted RBP27.16■■□□□ 1.94
CALD1-209ENST00000436461 DISP1Q96F81 1524 aa27.12■■□□□ 1.93
CALD1-209ENST00000436461 P3H3Q8IVL6 736 aa27.1■■□□□ 1.93
CALD1-209ENST00000436461 KIAA0556O60303 1618 aa27.09■■□□□ 1.93
CALD1-209ENST00000436461 ARHGEF11O15085 1522 aa27.09■■□□□ 1.93
CALD1-209ENST00000436461 SAMD9Q5K651 1589 aa27.08■■□□□ 1.93
CALD1-209ENST00000436461 CEP162Q5TB80 1403 aa27.08■■□□□ 1.93
CALD1-209ENST00000436461 RIMBP3CA6NJZ7 1639 aa27.06■■□□□ 1.92
CALD1-209ENST00000436461 RIMBP3BA6NNM3 1639 aa27.06■■□□□ 1.92
CALD1-209ENST00000436461 RIMBP3Q9UFD9 1639 aa27.06■■□□□ 1.92
CALD1-209ENST00000436461 ARHGAP35Q9NRY4 1499 aa27.04■■□□□ 1.92
CALD1-209ENST00000436461 TTBK1Q5TCY1 1321 aaPredicted RBP27.04■■□□□ 1.92
CALD1-209ENST00000436461 CLIP1P30622 1438 aa27.04■■□□□ 1.92
CALD1-209ENST00000436461 CARMIL2Q6F5E8 1435 aa27.04■■□□□ 1.92
CALD1-209ENST00000436461 DNAJC5Q9H3Z4 198 aa27.02■■□□□ 1.92
CALD1-209ENST00000436461 EFCAB5A4FU69 1503 aa27.01■■□□□ 1.91
CALD1-209ENST00000436461 FHOD3Q2V2M9 1422 aa27■■□□□ 1.91
CALD1-209ENST00000436461 ARAP1Q96P48 1450 aa26.93■■□□□ 1.9
CALD1-209ENST00000436461 PTPRGP23470 1445 aa26.88■■□□□ 1.89
CALD1-209ENST00000436461 CYB5RLQ6IPT4 315 aa26.84■■□□□ 1.89
CALD1-209ENST00000436461 PLB1Q6P1J6 1458 aa26.8■■□□□ 1.88
CALD1-209ENST00000436461 FMN1Q68DA7 1419 aa26.75■■□□□ 1.87
CALD1-209ENST00000436461 ABCA8O94911 1581 aa26.73■■□□□ 1.87
CALD1-209ENST00000436461 RAPGEF6Q8TEU7 1601 aa26.72■■□□□ 1.87
CALD1-209ENST00000436461 PCF11O94913 1555 aaKnown RBP26.72■■□□□ 1.87
CALD1-209ENST00000436461 UACAQ9BZF9 1416 aa26.72■■□□□ 1.87
CALD1-209ENST00000436461 ADCY10Q96PN6 1610 aa26.72■■□□□ 1.87
CALD1-209ENST00000436461 ARID3CA6NKF2 412 aa26.68■■□□□ 1.86
CALD1-209ENST00000436461 VPS8Q8N3P4 1428 aa26.68■■□□□ 1.86
CALD1-209ENST00000436461 ATP1B4Q9UN42 357 aaPredicted RBP26.68■■□□□ 1.86
CALD1-209ENST00000436461 ABCC2Q92887 1545 aa26.67■■□□□ 1.86
CALD1-209ENST00000436461 LRRIQ1Q96JM4 1722 aa26.63■■□□□ 1.85
CALD1-209ENST00000436461 NUP153P49790 1475 aaKnown RBP26.63■■□□□ 1.85
CALD1-209ENST00000436461 CASKIN1Q8WXD9 1431 aa26.62■■□□□ 1.85
CALD1-209ENST00000436461 UHRF1BP1LA0JNW5 1464 aa26.62■■□□□ 1.85
CALD1-209ENST00000436461 HECW1Q76N89 1606 aa26.61■■□□□ 1.85
CALD1-209ENST00000436461 FYCO1Q9BQS8 1478 aa26.59■■□□□ 1.85
CALD1-209ENST00000436461 CDK13Q14004 1512 aaKnown RBP26.56■■□□□ 1.84
CALD1-209ENST00000436461 ZCCHC11Q5TAX3 1644 aaKnown RBP26.56■■□□□ 1.84
CALD1-209ENST00000436461 ATP10BO94823 1461 aa26.53■■□□□ 1.84
CALD1-209ENST00000436461 EPRSP07814 1512 aaKnown RBP26.53■■□□□ 1.84
CALD1-209ENST00000436461 KDM5BQ9UGL1 1544 aa26.53■■□□□ 1.84
CALD1-209ENST00000436461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.5■■□□□ 1.83
CALD1-209ENST00000436461 HNRNPUL2Q1KMD3 747 aaKnown RBP26.5■■□□□ 1.83
CALD1-209ENST00000436461 NPM1P06748 294 aaKnown RBP eCLIP26.47■■□□□ 1.83
CALD1-209ENST00000436461 CCDC18Q5T9S5 1454 aa26.44■■□□□ 1.82
CALD1-209ENST00000436461 CFAP43Q8NDM7 1665 aa26.42■■□□□ 1.82
CALD1-209ENST00000436461 TIAM1Q13009 1591 aa26.4■■□□□ 1.82
CALD1-209ENST00000436461 MAGI3Q5TCQ9 1506 aa26.38■■□□□ 1.81
CALD1-209ENST00000436461 ASXL2Q76L83 1435 aa26.38■■□□□ 1.81
CALD1-209ENST00000436461 MAPKBP1O60336 1514 aa26.35■■□□□ 1.81
CALD1-209ENST00000436461 APLP2Q06481 763 aa26.35■■□□□ 1.81
CALD1-209ENST00000436461 KANK4Q5T7N3 995 aaPredicted RBP26.32■■□□□ 1.8
CALD1-209ENST00000436461 WDR7Q9Y4E6 1490 aa26.32■■□□□ 1.8
CALD1-209ENST00000436461 PLEKHD1A6NEE1 506 aa26.31■■□□□ 1.8
CALD1-209ENST00000436461 PPARGC1BQ86YN6 1023 aaKnown RBP26.3■■□□□ 1.8
CALD1-209ENST00000436461 MAP3K1Q13233 1512 aa26.3■■□□□ 1.8
CALD1-209ENST00000436461 KCNH8Q96L42 1107 aa26.28■■□□□ 1.8
CALD1-209ENST00000436461 CDK11AQ9UQ88 783 aaPredicted RBP26.28■■□□□ 1.8
CALD1-209ENST00000436461 MTUS2Q5JR59 1369 aa26.27■■□□□ 1.8
CALD1-209ENST00000436461 TROQ12816 1431 aaPredicted RBP26.26■■□□□ 1.79
CALD1-209ENST00000436461 LRRC9Q6ZRR7 1453 aa26.26■■□□□ 1.79
CALD1-209ENST00000436461 KIF14Q15058 1648 aa26.25■■□□□ 1.79
CALD1-209ENST00000436461 EHBP1L1Q8N3D4 1523 aa26.23■■□□□ 1.79
CALD1-209ENST00000436461 DIP2BQ9P265 1576 aa26.2■■□□□ 1.78
CALD1-209ENST00000436461 KIF13AQ9H1H9 1805 aa26.18■■□□□ 1.78
CALD1-209ENST00000436461 ABCC10Q5T3U5 1492 aa26.17■■□□□ 1.78
CALD1-209ENST00000436461 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.15■■□□□ 1.78
CALD1-209ENST00000436461 TTC37Q6PGP7 1564 aa26.15■■□□□ 1.78
CALD1-209ENST00000436461 SUPT6HQ7KZ85 1726 aaKnown RBP26.15■■□□□ 1.78
CALD1-209ENST00000436461 FAM69CQ0P6D2 419 aa26.14■■□□□ 1.78
CALD1-209ENST00000436461 TRHP20396 242 aaPredicted RBP26.11■■□□□ 1.77
CALD1-209ENST00000436461 NCOA2Q15596 1464 aa26.11■■□□□ 1.77
CALD1-209ENST00000436461 ABCA9Q8IUA7 1624 aa26.1■■□□□ 1.77
CALD1-209ENST00000436461 GLI2P10070 1586 aa26.09■■□□□ 1.77
CALD1-209ENST00000436461 TSPOAP1O95153 1857 aa26.07■■□□□ 1.76
CALD1-209ENST00000436461 MAP3K4Q9Y6R4 1608 aa26.06■■□□□ 1.76
CALD1-209ENST00000436461 CDC42BPAQ5VT25 1732 aa26.04■■□□□ 1.76
CALD1-209ENST00000436461 MYO5CQ9NQX4 1742 aa26.03■■□□□ 1.76
CALD1-209ENST00000436461 CD109Q6YHK3 1445 aa26.02■■□□□ 1.76
CALD1-209ENST00000436461 PHLDB1Q86UU1 1377 aa26.01■■□□□ 1.75
CALD1-209ENST00000436461 CDC42BPBQ9Y5S2 1711 aa26■■□□□ 1.75
CALD1-209ENST00000436461 CCNB3Q8WWL7 1395 aa26■■□□□ 1.75
CALD1-209ENST00000436461 GPATCH8Q9UKJ3 1502 aaKnown RBP25.99■■□□□ 1.75
CALD1-209ENST00000436461 PREX2Q70Z35 1606 aa25.98■■□□□ 1.75
CALD1-209ENST00000436461 PPRC1Q5VV67 1664 aaKnown RBP25.97■■□□□ 1.75
CALD1-209ENST00000436461 ITSN2Q9NZM3 1697 aa25.96■■□□□ 1.75
CALD1-209ENST00000436461 PLCH2O75038 1416 aa25.94■■□□□ 1.74
CALD1-209ENST00000436461 ARHGAP5Q13017 1502 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms