RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 IGF1RP08069 1367 aa18.8■□□□□ 0.6
HMGCL-204ENST00000436439 KIF27Q86VH2 1401 aa18.79■□□□□ 0.6
HMGCL-204ENST00000436439 KIF13AQ9H1H9 1805 aa18.79■□□□□ 0.6
HMGCL-204ENST00000436439 KIAA0586Q9BVV6 1533 aa18.74■□□□□ 0.59
HMGCL-204ENST00000436439 ADCY10Q96PN6 1610 aa18.71■□□□□ 0.58
HMGCL-204ENST00000436439 CARMIL1Q5VZK9 1371 aa18.68■□□□□ 0.58
HMGCL-204ENST00000436439 MAPKBP1O60336 1514 aa18.63■□□□□ 0.57
HMGCL-204ENST00000436439 DIP2BQ9P265 1576 aa18.61■□□□□ 0.57
HMGCL-204ENST00000436439 ABCC10Q5T3U5 1492 aa18.6■□□□□ 0.57
HMGCL-204ENST00000436439 IQGAP2Q13576 1575 aa18.6■□□□□ 0.57
HMGCL-204ENST00000436439 NPM1P06748 294 aaKnown RBP eCLIP18.57■□□□□ 0.56
HMGCL-204ENST00000436439 FAM69CQ0P6D2 419 aa18.55■□□□□ 0.56
HMGCL-204ENST00000436439 PTPRGP23470 1445 aa18.54■□□□□ 0.56
HMGCL-204ENST00000436439 TTBK1Q5TCY1 1321 aaPredicted RBP18.53■□□□□ 0.56
HMGCL-204ENST00000436439 TSPOAP1O95153 1857 aa18.53■□□□□ 0.56
HMGCL-204ENST00000436439 RAPGEF2Q9Y4G8 1499 aa18.52■□□□□ 0.56
HMGCL-204ENST00000436439 DISP1Q96F81 1524 aa18.52■□□□□ 0.56
HMGCL-204ENST00000436439 TNIKQ9UKE5 1360 aa18.52■□□□□ 0.56
HMGCL-204ENST00000436439 CARMIL2Q6F5E8 1435 aa18.52■□□□□ 0.55
HMGCL-204ENST00000436439 AEBP2Q6ZN18 517 aaPredicted RBP18.49■□□□□ 0.55
HMGCL-204ENST00000436439 ABCC2Q92887 1545 aa18.47■□□□□ 0.55
HMGCL-204ENST00000436439 UGGT2Q9NYU1 1516 aa18.47■□□□□ 0.55
HMGCL-204ENST00000436439 CTTNBP2Q8WZ74 1663 aa18.46■□□□□ 0.55
HMGCL-204ENST00000436439 KIAA0556O60303 1618 aa18.45■□□□□ 0.54
HMGCL-204ENST00000436439 UHRF1BP1LA0JNW5 1464 aa18.44■□□□□ 0.54
HMGCL-204ENST00000436439 KDM6BO15054 1643 aa18.43■□□□□ 0.54
HMGCL-204ENST00000436439 UACAQ9BZF9 1416 aa18.42■□□□□ 0.54
HMGCL-204ENST00000436439 ASXL2Q76L83 1435 aa18.41■□□□□ 0.54
HMGCL-204ENST00000436439 PPRC1Q5VV67 1664 aaKnown RBP18.41■□□□□ 0.54
HMGCL-204ENST00000436439 CHIC1Q5VXU3 224 aa18.4■□□□□ 0.54
HMGCL-204ENST00000436439 ZCCHC11Q5TAX3 1644 aaKnown RBP18.39■□□□□ 0.53
HMGCL-204ENST00000436439 GLI2P10070 1586 aa18.37■□□□□ 0.53
HMGCL-204ENST00000436439 KDM5BQ9UGL1 1544 aa18.37■□□□□ 0.53
HMGCL-204ENST00000436439 PLB1Q6P1J6 1458 aa18.36■□□□□ 0.53
HMGCL-204ENST00000436439 PRXQ9BXM0 1461 aa18.35■□□□□ 0.53
HMGCL-204ENST00000436439 MAP3K4Q9Y6R4 1608 aa18.31■□□□□ 0.52
HMGCL-204ENST00000436439 EPRSP07814 1512 aaKnown RBP18.31■□□□□ 0.52
HMGCL-204ENST00000436439 ABCA8O94911 1581 aa18.27■□□□□ 0.52
HMGCL-204ENST00000436439 GOLGA3Q08378 1498 aa18.27■□□□□ 0.51
HMGCL-204ENST00000436439 COL17A1Q9UMD9 1497 aaPredicted RBP18.23■□□□□ 0.51
HMGCL-204ENST00000436439 WDR7Q9Y4E6 1490 aa18.23■□□□□ 0.51
HMGCL-204ENST00000436439 KDM4FA0A1W2PPD8 638 aa18.22■□□□□ 0.51
HMGCL-204ENST00000436439 TEX14Q8IWB6 1497 aa18.17■□□□□ 0.5
HMGCL-204ENST00000436439 CFAP43Q8NDM7 1665 aa18.17■□□□□ 0.5
HMGCL-204ENST00000436439 CSRNP3Q8WYN3 585 aa18.17■□□□□ 0.5
HMGCL-204ENST00000436439 SAMD9Q5K651 1589 aa18.16■□□□□ 0.5
HMGCL-204ENST00000436439 P3H3Q8IVL6 736 aa18.16■□□□□ 0.5
HMGCL-204ENST00000436439 KCNH8Q96L42 1107 aa18.12■□□□□ 0.49
HMGCL-204ENST00000436439 CD109Q6YHK3 1445 aa18.1■□□□□ 0.49
HMGCL-204ENST00000436439 MAGI3Q5TCQ9 1506 aa18.1■□□□□ 0.49
HMGCL-204ENST00000436439 ARID3CA6NKF2 412 aa18.1■□□□□ 0.49
HMGCL-204ENST00000436439 ATP10BO94823 1461 aa18.1■□□□□ 0.49
HMGCL-204ENST00000436439 RAPGEF6Q8TEU7 1601 aa18.09■□□□□ 0.49
HMGCL-204ENST00000436439 ADGRL1O94910 1474 aa18.08■□□□□ 0.49
HMGCL-204ENST00000436439 EEA1Q15075 1411 aa18.08■□□□□ 0.48
HMGCL-204ENST00000436439 FAM9AQ8IZU1 332 aaPredicted RBP18.04■□□□□ 0.48
HMGCL-204ENST00000436439 ABCA9Q8IUA7 1624 aa18.03■□□□□ 0.48
HMGCL-204ENST00000436439 RANGAP1P46060 587 aaPredicted RBP18.02■□□□□ 0.47
HMGCL-204ENST00000436439 KIF21BO75037 1637 aa18.01■□□□□ 0.47
HMGCL-204ENST00000436439 FHOD3Q2V2M9 1422 aa18.01■□□□□ 0.47
HMGCL-204ENST00000436439 NUP153P49790 1475 aaKnown RBP17.99■□□□□ 0.47
HMGCL-204ENST00000436439 ARAP3Q8WWN8 1544 aa17.96■□□□□ 0.46
HMGCL-204ENST00000436439 EFCAB5A4FU69 1503 aa17.93■□□□□ 0.46
HMGCL-204ENST00000436439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.92■□□□□ 0.46
HMGCL-204ENST00000436439 HNRNPUL2Q1KMD3 747 aaKnown RBP17.92■□□□□ 0.46
HMGCL-204ENST00000436439 FRMPD1Q5SYB0 1578 aa17.89■□□□□ 0.45
HMGCL-204ENST00000436439 EHMT2Q96KQ7 1210 aa17.89■□□□□ 0.45
HMGCL-204ENST00000436439 NEO1Q92859 1461 aa17.87■□□□□ 0.45
HMGCL-204ENST00000436439 PHLDB1Q86UU1 1377 aa17.86■□□□□ 0.45
HMGCL-204ENST00000436439 HECW2Q9P2P5 1572 aa17.86■□□□□ 0.45
HMGCL-204ENST00000436439 CDK13Q14004 1512 aaKnown RBP17.85■□□□□ 0.45
HMGCL-204ENST00000436439 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.85■□□□□ 0.45
HMGCL-204ENST00000436439 RAPGEF3O95398 923 aa17.85■□□□□ 0.45
HMGCL-204ENST00000436439 TTC37Q6PGP7 1564 aa17.84■□□□□ 0.45
HMGCL-204ENST00000436439 RICTORQ6R327 1708 aa17.83■□□□□ 0.44
HMGCL-204ENST00000436439 PLEKHD1A6NEE1 506 aa17.82■□□□□ 0.44
HMGCL-204ENST00000436439 UBTFP17480 764 aaKnown RBP17.8■□□□□ 0.44
HMGCL-204ENST00000436439 ARHGAP35Q9NRY4 1499 aa17.8■□□□□ 0.44
HMGCL-204ENST00000436439 ADAMTSL3P82987 1691 aa17.8■□□□□ 0.44
HMGCL-204ENST00000436439 CFAP74Q9C0B2 1584 aa17.79■□□□□ 0.44
HMGCL-204ENST00000436439 LRRIQ1Q96JM4 1722 aa17.78■□□□□ 0.44
HMGCL-204ENST00000436439 HECW1Q76N89 1606 aa17.77■□□□□ 0.44
HMGCL-204ENST00000436439 BCORL1Q5H9F3 1711 aa17.77■□□□□ 0.44
HMGCL-204ENST00000436439 AKNAQ7Z591 1439 aa17.77■□□□□ 0.44
HMGCL-204ENST00000436439 FANCAO15360 1455 aa17.77■□□□□ 0.44
HMGCL-204ENST00000436439 DENND4BO75064 1496 aaPredicted RBP17.75■□□□□ 0.43
HMGCL-204ENST00000436439 ARHGEF40Q8TER5 1519 aa17.75■□□□□ 0.43
HMGCL-204ENST00000436439 FMN1Q68DA7 1419 aa17.74■□□□□ 0.43
HMGCL-204ENST00000436439 SIGLEC1Q9BZZ2 1709 aa17.73■□□□□ 0.43
HMGCL-204ENST00000436439 MADDQ8WXG6 1647 aa17.72■□□□□ 0.43
HMGCL-204ENST00000436439 MYO5CQ9NQX4 1742 aa17.72■□□□□ 0.43
HMGCL-204ENST00000436439 KIF14Q15058 1648 aa17.72■□□□□ 0.43
HMGCL-204ENST00000436439 PTPRMP28827 1452 aa17.71■□□□□ 0.43
HMGCL-204ENST00000436439 ATP1B4Q9UN42 357 aaPredicted RBP17.71■□□□□ 0.43
HMGCL-204ENST00000436439 ZMYM4Q5VZL5 1548 aa17.71■□□□□ 0.43
HMGCL-204ENST00000436439 PLCH2O75038 1416 aa17.69■□□□□ 0.42
HMGCL-204ENST00000436439 RIMS1Q86UR5 1692 aaKnown RBP17.67■□□□□ 0.42
HMGCL-204ENST00000436439 YEATS2Q9ULM3 1422 aa17.67■□□□□ 0.42
HMGCL-204ENST00000436439 ARID4BQ4LE39 1312 aaPredicted RBP17.67■□□□□ 0.42
HMGCL-204ENST00000436439 ZFYVE16Q7Z3T8 1539 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms