RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 ERICH3Q5RHP9 1530 aa16.63■□□□□ 0.25
LINC01516-201ENST00000436140 FHOD3Q2V2M9 1422 aa16.62■□□□□ 0.25
LINC01516-201ENST00000436140 ARHGAP35Q9NRY4 1499 aa16.62■□□□□ 0.25
LINC01516-201ENST00000436140 TARBP1Q13395 1621 aaKnown RBP16.51■□□□□ 0.23
LINC01516-201ENST00000436140 FAM50AQ14320 339 aaKnown RBP16.5■□□□□ 0.23
LINC01516-201ENST00000436140 IFT140Q96RY7 1462 aa16.49■□□□□ 0.23
LINC01516-201ENST00000436140 SNAPC4Q5SXM2 1469 aa16.48■□□□□ 0.23
LINC01516-201ENST00000436140 GRIN2BQ13224 1484 aa16.47■□□□□ 0.23
LINC01516-201ENST00000436140 WDR62O43379 1518 aa16.46■□□□□ 0.23
LINC01516-201ENST00000436140 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
LINC01516-201ENST00000436140 ABCA5Q8WWZ7 1642 aa16.45■□□□□ 0.22
LINC01516-201ENST00000436140 WDR97A6NE52 1622 aa16.39■□□□□ 0.21
LINC01516-201ENST00000436140 JPH4Q96JJ6 628 aa16.39■□□□□ 0.21
LINC01516-201ENST00000436140 THOC2Q8NI27 1593 aaKnown RBP16.37■□□□□ 0.21
LINC01516-201ENST00000436140 CUL7Q14999 1698 aa16.37■□□□□ 0.21
LINC01516-201ENST00000436140 EIF4G3O43432 1585 aaKnown RBP16.35■□□□□ 0.21
LINC01516-201ENST00000436140 MTUS2Q5JR59 1369 aa16.33■□□□□ 0.2
LINC01516-201ENST00000436140 PBRM1Q86U86 1689 aa16.31■□□□□ 0.2
LINC01516-201ENST00000436140 PHLDB1Q86UU1 1377 aa16.31■□□□□ 0.2
LINC01516-201ENST00000436140 GRIN2AQ12879 1464 aa16.3■□□□□ 0.2
LINC01516-201ENST00000436140 ADAMTS12P58397 1594 aa16.29■□□□□ 0.2
LINC01516-201ENST00000436140 PCF11O94913 1555 aaKnown RBP16.28■□□□□ 0.2
LINC01516-201ENST00000436140 FMN1Q68DA7 1419 aa16.28■□□□□ 0.2
LINC01516-201ENST00000436140 CHIC2Q9UKJ5 165 aa16.28■□□□□ 0.2
LINC01516-201ENST00000436140 ZEB1P37275 1124 aaPredicted RBP16.27■□□□□ 0.2
LINC01516-201ENST00000436140 CCNB3Q8WWL7 1395 aa16.27■□□□□ 0.19
LINC01516-201ENST00000436140 LRRC9Q6ZRR7 1453 aa16.25■□□□□ 0.19
LINC01516-201ENST00000436140 SYNJ2O15056 1496 aa16.24■□□□□ 0.19
LINC01516-201ENST00000436140 CASKIN1Q8WXD9 1431 aa16.24■□□□□ 0.19
LINC01516-201ENST00000436140 ZNF777Q9ULD5 760 aaPredicted RBP16.23■□□□□ 0.19
LINC01516-201ENST00000436140 IQGAP2Q13576 1575 aa16.23■□□□□ 0.19
LINC01516-201ENST00000436140 CTTNBP2Q8WZ74 1663 aa16.23■□□□□ 0.19
LINC01516-201ENST00000436140 KIAA0586Q9BVV6 1533 aa16.22■□□□□ 0.19
LINC01516-201ENST00000436140 TIAM1Q13009 1591 aa16.21■□□□□ 0.18
LINC01516-201ENST00000436140 MAGI1Q96QZ7 1491 aaPredicted RBP16.2■□□□□ 0.18
LINC01516-201ENST00000436140 EFCAB5A4FU69 1503 aa16.19■□□□□ 0.18
LINC01516-201ENST00000436140 CDK13Q14004 1512 aaKnown RBP16.18■□□□□ 0.18
LINC01516-201ENST00000436140 RRP7BPQ9NSQ0 103 aa16.17■□□□□ 0.18
LINC01516-201ENST00000436140 PLB1Q6P1J6 1458 aa16.16■□□□□ 0.18
LINC01516-201ENST00000436140 CEP170Q5SW79 1584 aa16.16■□□□□ 0.18
LINC01516-201ENST00000436140 ZNF644Q9H582 1327 aaPredicted RBP16.15■□□□□ 0.18
LINC01516-201ENST00000436140 KCNH8Q96L42 1107 aa16.15■□□□□ 0.18
LINC01516-201ENST00000436140 FYCO1Q9BQS8 1478 aa16.15■□□□□ 0.18
LINC01516-201ENST00000436140 DISP1Q96F81 1524 aa16.15■□□□□ 0.18
LINC01516-201ENST00000436140 PRG4Q92954 1404 aaPredicted RBP16.14■□□□□ 0.17
LINC01516-201ENST00000436140 NEUROD1Q13562 356 aa16.13■□□□□ 0.17
LINC01516-201ENST00000436140 RRBP1Q9P2E9 1410 aaKnown RBP16.11■□□□□ 0.17
LINC01516-201ENST00000436140 CARMIL2Q6F5E8 1435 aa16.11■□□□□ 0.17
LINC01516-201ENST00000436140 SAMD9Q5K651 1589 aa16.1■□□□□ 0.17
LINC01516-201ENST00000436140 CDK11AQ9UQ88 783 aaPredicted RBP16.1■□□□□ 0.17
LINC01516-201ENST00000436140 PLEKHD1A6NEE1 506 aa16.08■□□□□ 0.17
LINC01516-201ENST00000436140 PTPRGP23470 1445 aa16.08■□□□□ 0.16
LINC01516-201ENST00000436140 EPRSP07814 1512 aaKnown RBP16.08■□□□□ 0.16
LINC01516-201ENST00000436140 NUP160Q12769 1436 aa16.07■□□□□ 0.16
LINC01516-201ENST00000436140 NCOA2Q15596 1464 aa16.07■□□□□ 0.16
LINC01516-201ENST00000436140 RAB3GAP2Q9H2M9 1393 aa16.07■□□□□ 0.16
LINC01516-201ENST00000436140 SIN3AQ96ST3 1273 aa16.06■□□□□ 0.16
LINC01516-201ENST00000436140 MAGI3Q5TCQ9 1506 aa16.06■□□□□ 0.16
LINC01516-201ENST00000436140 UGGT2Q9NYU1 1516 aa16.06■□□□□ 0.16
LINC01516-201ENST00000436140 TRIM52Q96A61 297 aa16.05■□□□□ 0.16
LINC01516-201ENST00000436140 CFDP1Q9UEE9 299 aaPredicted RBP16.04■□□□□ 0.16
LINC01516-201ENST00000436140 KIAA0556O60303 1618 aa16.03■□□□□ 0.16
LINC01516-201ENST00000436140 FGD6Q6ZV73 1430 aa16.02■□□□□ 0.16
LINC01516-201ENST00000436140 NUP153P49790 1475 aaKnown RBP16.02■□□□□ 0.16
LINC01516-201ENST00000436140 DHX57Q6P158 1386 aaKnown RBP16.01■□□□□ 0.15
LINC01516-201ENST00000436140 MAP3K1Q13233 1512 aa16■□□□□ 0.15
LINC01516-201ENST00000436140 PTPRKQ15262 1439 aa16■□□□□ 0.15
LINC01516-201ENST00000436140 LRRIQ1Q96JM4 1722 aa15.99■□□□□ 0.15
LINC01516-201ENST00000436140 ERCC6L2Q5T890 1561 aa15.99■□□□□ 0.15
LINC01516-201ENST00000436140 MYOM3Q5VTT5 1437 aa15.97■□□□□ 0.15
LINC01516-201ENST00000436140 FOXD1Q16676 465 aa15.97■□□□□ 0.15
LINC01516-201ENST00000436140 SETD5Q9C0A6 1442 aa15.97■□□□□ 0.15
LINC01516-201ENST00000436140 OSCARQ8IYS5 282 aa15.96■□□□□ 0.15
LINC01516-201ENST00000436140 CHD1O14646 1710 aa15.96■□□□□ 0.14
LINC01516-201ENST00000436140 HNRNPMP52272 730 aaKnown RBP eCLIP15.95■□□□□ 0.14
LINC01516-201ENST00000436140 CFAP43Q8NDM7 1665 aa15.94■□□□□ 0.14
LINC01516-201ENST00000436140 HECW1Q76N89 1606 aa15.94■□□□□ 0.14
LINC01516-201ENST00000436140 CCDC18Q5T9S5 1454 aa15.93■□□□□ 0.14
LINC01516-201ENST00000436140 ATP10BO94823 1461 aa15.92■□□□□ 0.14
LINC01516-201ENST00000436140 HIRIP3Q9BW71 556 aaPredicted RBP15.9■□□□□ 0.14
LINC01516-201ENST00000436140 RAPGEF6Q8TEU7 1601 aa15.9■□□□□ 0.14
LINC01516-201ENST00000436140 EHBP1L1Q8N3D4 1523 aa15.88■□□□□ 0.13
LINC01516-201ENST00000436140 TROQ12816 1431 aaPredicted RBP15.86■□□□□ 0.13
LINC01516-201ENST00000436140 MYT1LQ9UL68 1186 aa15.86■□□□□ 0.13
LINC01516-201ENST00000436140 SUPT6HQ7KZ85 1726 aaKnown RBP15.85■□□□□ 0.13
LINC01516-201ENST00000436140 CYB5RLQ6IPT4 315 aa15.85■□□□□ 0.13
LINC01516-201ENST00000436140 UACAQ9BZF9 1416 aa15.85■□□□□ 0.13
LINC01516-201ENST00000436140 ARHGEF11O15085 1522 aa15.84■□□□□ 0.13
LINC01516-201ENST00000436140 DIEXFQ68CQ4 756 aaKnown RBP15.84■□□□□ 0.13
LINC01516-201ENST00000436140 ZNF316A6NFI3 1004 aaPredicted RBP15.83■□□□□ 0.12
LINC01516-201ENST00000436140 TSPY4P0CV99 314 aa15.81■□□□□ 0.12
LINC01516-201ENST00000436140 TSPY10P0CW01 314 aa15.81■□□□□ 0.12
LINC01516-201ENST00000436140 PTPN23Q9H3S7 1636 aa15.81■□□□□ 0.12
LINC01516-201ENST00000436140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.8■□□□□ 0.12
LINC01516-201ENST00000436140 KIF14Q15058 1648 aa15.8■□□□□ 0.12
LINC01516-201ENST00000436140 NAIPQ13075 1403 aa15.79■□□□□ 0.12
LINC01516-201ENST00000436140 GPATCH8Q9UKJ3 1502 aaKnown RBP15.79■□□□□ 0.12
LINC01516-201ENST00000436140 NPM1P06748 294 aaKnown RBP eCLIP15.78■□□□□ 0.12
LINC01516-201ENST00000436140 SLC4A1APQ9BWU0 796 aaKnown RBP15.78■□□□□ 0.12
LINC01516-201ENST00000436140 ABCC5O15440 1437 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms