RNA–Protein interactions for RNA: ENST00000436040.6

APTX-208, Transcript of aprataxin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene APTX, Length 2,168 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-208ENST00000436040 SHROOM2Q13796 1616 aa19.17■□□□□ 0.66
APTX-208ENST00000436040 PRXQ9BXM0 1461 aa19.17■□□□□ 0.66
APTX-208ENST00000436040 CSRNP3Q8WYN3 585 aa19.14■□□□□ 0.65
APTX-208ENST00000436040 KIAA0586Q9BVV6 1533 aa19.14■□□□□ 0.65
APTX-208ENST00000436040 CTTNBP2Q8WZ74 1663 aa19.07■□□□□ 0.64
APTX-208ENST00000436040 IQGAP2Q13576 1575 aa19.07■□□□□ 0.64
APTX-208ENST00000436040 ARAP1Q96P48 1450 aa19.06■□□□□ 0.64
APTX-208ENST00000436040 JPH4Q96JJ6 628 aa19.05■□□□□ 0.64
APTX-208ENST00000436040 KIF21BO75037 1637 aa19.05■□□□□ 0.64
APTX-208ENST00000436040 ERCC6L2Q5T890 1561 aa19.05■□□□□ 0.64
APTX-208ENST00000436040 PRG4Q92954 1404 aaPredicted RBP19.03■□□□□ 0.64
APTX-208ENST00000436040 EHMT2Q96KQ7 1210 aa19.02■□□□□ 0.63
APTX-208ENST00000436040 UGGT2Q9NYU1 1516 aa18.97■□□□□ 0.63
APTX-208ENST00000436040 CYB5RLQ6IPT4 315 aa18.95■□□□□ 0.62
APTX-208ENST00000436040 CARMIL2Q6F5E8 1435 aa18.92■□□□□ 0.62
APTX-208ENST00000436040 GOLGA3Q08378 1498 aa18.91■□□□□ 0.62
APTX-208ENST00000436040 DISP1Q96F81 1524 aa18.91■□□□□ 0.62
APTX-208ENST00000436040 KIAA0556O60303 1618 aa18.89■□□□□ 0.61
APTX-208ENST00000436040 TNIKQ9UKE5 1360 aa18.85■□□□□ 0.61
APTX-208ENST00000436040 SAMD9Q5K651 1589 aa18.81■□□□□ 0.6
APTX-208ENST00000436040 PTPRGP23470 1445 aa18.81■□□□□ 0.6
APTX-208ENST00000436040 LOC105371045A0A1W2PR82 267 aa18.79■□□□□ 0.6
APTX-208ENST00000436040 UBTFP17480 764 aaKnown RBP18.79■□□□□ 0.6
APTX-208ENST00000436040 ADCY10Q96PN6 1610 aa18.76■□□□□ 0.59
APTX-208ENST00000436040 EFCAB5A4FU69 1503 aa18.75■□□□□ 0.59
APTX-208ENST00000436040 RANGAP1P46060 587 aaPredicted RBP18.72■□□□□ 0.59
APTX-208ENST00000436040 UHRF1BP1LA0JNW5 1464 aa18.71■□□□□ 0.59
APTX-208ENST00000436040 TTBK1Q5TCY1 1321 aaPredicted RBP18.71■□□□□ 0.59
APTX-208ENST00000436040 UACAQ9BZF9 1416 aa18.7■□□□□ 0.58
APTX-208ENST00000436040 ABCC2Q92887 1545 aa18.69■□□□□ 0.58
APTX-208ENST00000436040 ABCA8O94911 1581 aa18.67■□□□□ 0.58
APTX-208ENST00000436040 P3H3Q8IVL6 736 aa18.67■□□□□ 0.58
APTX-208ENST00000436040 FHOD3Q2V2M9 1422 aa18.65■□□□□ 0.58
APTX-208ENST00000436040 PLB1Q6P1J6 1458 aa18.65■□□□□ 0.58
APTX-208ENST00000436040 ARHGAP35Q9NRY4 1499 aa18.64■□□□□ 0.57
APTX-208ENST00000436040 MAPKBP1O60336 1514 aa18.63■□□□□ 0.57
APTX-208ENST00000436040 NPM1P06748 294 aaKnown RBP eCLIP18.62■□□□□ 0.57
APTX-208ENST00000436040 KDM5BQ9UGL1 1544 aa18.61■□□□□ 0.57
APTX-208ENST00000436040 RAPGEF6Q8TEU7 1601 aa18.6■□□□□ 0.57
APTX-208ENST00000436040 ZCCHC11Q5TAX3 1644 aaKnown RBP18.59■□□□□ 0.57
APTX-208ENST00000436040 HRCP23327 699 aa18.55■□□□□ 0.56
APTX-208ENST00000436040 CLIP1P30622 1438 aa18.55■□□□□ 0.56
APTX-208ENST00000436040 FMN1Q68DA7 1419 aa18.55■□□□□ 0.56
APTX-208ENST00000436040 KIF13AQ9H1H9 1805 aa18.52■□□□□ 0.56
APTX-208ENST00000436040 TRHP20396 242 aaPredicted RBP18.52■□□□□ 0.56
APTX-208ENST00000436040 NUP153P49790 1475 aaKnown RBP18.51■□□□□ 0.55
APTX-208ENST00000436040 ASXL2Q76L83 1435 aa18.51■□□□□ 0.55
APTX-208ENST00000436040 CEP162Q5TB80 1403 aa18.5■□□□□ 0.55
APTX-208ENST00000436040 ABCC10Q5T3U5 1492 aa18.5■□□□□ 0.55
APTX-208ENST00000436040 DIP2BQ9P265 1576 aa18.5■□□□□ 0.55
APTX-208ENST00000436040 ATP10BO94823 1461 aa18.49■□□□□ 0.55
APTX-208ENST00000436040 HECW1Q76N89 1606 aa18.47■□□□□ 0.55
APTX-208ENST00000436040 WDR7Q9Y4E6 1490 aa18.45■□□□□ 0.54
APTX-208ENST00000436040 PCF11O94913 1555 aaKnown RBP18.43■□□□□ 0.54
APTX-208ENST00000436040 GLI2P10070 1586 aa18.43■□□□□ 0.54
APTX-208ENST00000436040 CASKIN1Q8WXD9 1431 aa18.42■□□□□ 0.54
APTX-208ENST00000436040 EPRSP07814 1512 aaKnown RBP18.41■□□□□ 0.54
APTX-208ENST00000436040 ARID3CA6NKF2 412 aa18.41■□□□□ 0.54
APTX-208ENST00000436040 FAM69CQ0P6D2 419 aa18.41■□□□□ 0.54
APTX-208ENST00000436040 LRRIQ1Q96JM4 1722 aa18.4■□□□□ 0.54
APTX-208ENST00000436040 FYCO1Q9BQS8 1478 aa18.39■□□□□ 0.53
APTX-208ENST00000436040 CDK13Q14004 1512 aaKnown RBP18.38■□□□□ 0.53
APTX-208ENST00000436040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.36■□□□□ 0.53
APTX-208ENST00000436040 HNRNPUL2Q1KMD3 747 aaKnown RBP18.36■□□□□ 0.53
APTX-208ENST00000436040 MAP3K4Q9Y6R4 1608 aa18.35■□□□□ 0.53
APTX-208ENST00000436040 CCDC18Q5T9S5 1454 aa18.35■□□□□ 0.53
APTX-208ENST00000436040 ATP1B4Q9UN42 357 aaPredicted RBP18.34■□□□□ 0.53
APTX-208ENST00000436040 CFAP43Q8NDM7 1665 aa18.33■□□□□ 0.52
APTX-208ENST00000436040 TSPOAP1O95153 1857 aa18.33■□□□□ 0.52
APTX-208ENST00000436040 PPRC1Q5VV67 1664 aaKnown RBP18.31■□□□□ 0.52
APTX-208ENST00000436040 PLEKHD1A6NEE1 506 aa18.31■□□□□ 0.52
APTX-208ENST00000436040 KCNH8Q96L42 1107 aa18.3■□□□□ 0.52
APTX-208ENST00000436040 ABCA9Q8IUA7 1624 aa18.3■□□□□ 0.52
APTX-208ENST00000436040 VPS8Q8N3P4 1428 aa18.28■□□□□ 0.52
APTX-208ENST00000436040 CDK11AQ9UQ88 783 aaPredicted RBP18.27■□□□□ 0.52
APTX-208ENST00000436040 TROQ12816 1431 aaPredicted RBP18.25■□□□□ 0.51
APTX-208ENST00000436040 CD109Q6YHK3 1445 aa18.25■□□□□ 0.51
APTX-208ENST00000436040 MAGI3Q5TCQ9 1506 aa18.24■□□□□ 0.51
APTX-208ENST00000436040 TEX14Q8IWB6 1497 aa18.24■□□□□ 0.51
APTX-208ENST00000436040 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.23■□□□□ 0.51
APTX-208ENST00000436040 KIF14Q15058 1648 aa18.22■□□□□ 0.51
APTX-208ENST00000436040 TTC37Q6PGP7 1564 aa18.21■□□□□ 0.51
APTX-208ENST00000436040 TIAM1Q13009 1591 aa18.17■□□□□ 0.5
APTX-208ENST00000436040 KDM6BO15054 1643 aa18.16■□□□□ 0.5
APTX-208ENST00000436040 MYO5CQ9NQX4 1742 aa18.15■□□□□ 0.5
APTX-208ENST00000436040 MAP3K1Q13233 1512 aa18.15■□□□□ 0.5
APTX-208ENST00000436040 EHBP1L1Q8N3D4 1523 aa18.14■□□□□ 0.5
APTX-208ENST00000436040 PCGF6Q9BYE7 350 aa18.13■□□□□ 0.49
APTX-208ENST00000436040 CFAP74Q9C0B2 1584 aa18.13■□□□□ 0.49
APTX-208ENST00000436040 ARAP3Q8WWN8 1544 aa18.12■□□□□ 0.49
APTX-208ENST00000436040 MTUS2Q5JR59 1369 aa18.12■□□□□ 0.49
APTX-208ENST00000436040 NEO1Q92859 1461 aa18.12■□□□□ 0.49
APTX-208ENST00000436040 PHLDB1Q86UU1 1377 aa18.11■□□□□ 0.49
APTX-208ENST00000436040 PLCH2O75038 1416 aa18.11■□□□□ 0.49
APTX-208ENST00000436040 PREX2Q70Z35 1606 aa18.09■□□□□ 0.49
APTX-208ENST00000436040 CDC42BPAQ5VT25 1732 aa18.08■□□□□ 0.49
APTX-208ENST00000436040 FANCAO15360 1455 aa18.08■□□□□ 0.48
APTX-208ENST00000436040 CDC42BPBQ9Y5S2 1711 aa18.07■□□□□ 0.48
APTX-208ENST00000436040 COL17A1Q9UMD9 1497 aaPredicted RBP18.07■□□□□ 0.48
APTX-208ENST00000436040 LRRC9Q6ZRR7 1453 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms