RNA–Protein interactions for RNA: ENST00000436029.5

NR1H3-208, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-208ENST00000436029 JPH4Q96JJ6 628 aa29.13■■■□□ 2.25
NR1H3-208ENST00000436029 GOLGA3Q08378 1498 aa29.04■■■□□ 2.24
NR1H3-208ENST00000436029 SHROOM2Q13796 1616 aa29.04■■■□□ 2.24
NR1H3-208ENST00000436029 CTTNBP2Q8WZ74 1663 aa29.01■■■□□ 2.23
NR1H3-208ENST00000436029 IQGAP2Q13576 1575 aa29.01■■■□□ 2.23
NR1H3-208ENST00000436029 UBTFP17480 764 aaKnown RBP29■■■□□ 2.23
NR1H3-208ENST00000436029 EHMT2Q96KQ7 1210 aa29■■■□□ 2.23
NR1H3-208ENST00000436029 ARHGEF11O15085 1522 aa28.96■■■□□ 2.23
NR1H3-208ENST00000436029 PRG4Q92954 1404 aaPredicted RBP28.95■■■□□ 2.23
NR1H3-208ENST00000436029 RIMBP3CA6NJZ7 1639 aa28.92■■■□□ 2.22
NR1H3-208ENST00000436029 RIMBP3BA6NNM3 1639 aa28.92■■■□□ 2.22
NR1H3-208ENST00000436029 RIMBP3Q9UFD9 1639 aa28.92■■■□□ 2.22
NR1H3-208ENST00000436029 UGGT2Q9NYU1 1516 aa28.91■■■□□ 2.22
NR1H3-208ENST00000436029 ERCC6L2Q5T890 1561 aa28.88■■■□□ 2.21
NR1H3-208ENST00000436029 LOC105371045A0A1W2PR82 267 aa28.85■■■□□ 2.21
NR1H3-208ENST00000436029 CARMIL2Q6F5E8 1435 aa28.84■■■□□ 2.21
NR1H3-208ENST00000436029 TNIKQ9UKE5 1360 aa28.82■■■□□ 2.2
NR1H3-208ENST00000436029 DISP1Q96F81 1524 aa28.82■■■□□ 2.2
NR1H3-208ENST00000436029 CYB5RLQ6IPT4 315 aa28.77■■■□□ 2.2
NR1H3-208ENST00000436029 ARAP1Q96P48 1450 aa28.77■■■□□ 2.2
NR1H3-208ENST00000436029 RANGAP1P46060 587 aaPredicted RBP28.73■■■□□ 2.19
NR1H3-208ENST00000436029 KIAA0556O60303 1618 aa28.72■■■□□ 2.19
NR1H3-208ENST00000436029 SAMD9Q5K651 1589 aa28.69■■■□□ 2.18
NR1H3-208ENST00000436029 PTPRGP23470 1445 aa28.69■■■□□ 2.18
NR1H3-208ENST00000436029 P3H3Q8IVL6 736 aa28.68■■■□□ 2.18
NR1H3-208ENST00000436029 EFCAB5A4FU69 1503 aa28.64■■■□□ 2.17
NR1H3-208ENST00000436029 TTBK1Q5TCY1 1321 aaPredicted RBP28.59■■■□□ 2.17
NR1H3-208ENST00000436029 ARHGAP35Q9NRY4 1499 aa28.59■■■□□ 2.17
NR1H3-208ENST00000436029 CLIP1P30622 1438 aa28.55■■■□□ 2.16
NR1H3-208ENST00000436029 FHOD3Q2V2M9 1422 aa28.52■■■□□ 2.16
NR1H3-208ENST00000436029 CEP162Q5TB80 1403 aa28.51■■■□□ 2.15
NR1H3-208ENST00000436029 UACAQ9BZF9 1416 aa28.5■■■□□ 2.15
NR1H3-208ENST00000436029 UHRF1BP1LA0JNW5 1464 aa28.45■■■□□ 2.14
NR1H3-208ENST00000436029 PLB1Q6P1J6 1458 aa28.43■■■□□ 2.14
NR1H3-208ENST00000436029 ABCA8O94911 1581 aa28.42■■■□□ 2.14
NR1H3-208ENST00000436029 ADCY10Q96PN6 1610 aa28.41■■■□□ 2.14
NR1H3-208ENST00000436029 FMN1Q68DA7 1419 aa28.4■■■□□ 2.14
NR1H3-208ENST00000436029 ABCC2Q92887 1545 aa28.38■■■□□ 2.13
NR1H3-208ENST00000436029 NPM1P06748 294 aaKnown RBP eCLIP28.38■■■□□ 2.13
NR1H3-208ENST00000436029 RAPGEF6Q8TEU7 1601 aa28.32■■■□□ 2.12
NR1H3-208ENST00000436029 KDM5BQ9UGL1 1544 aa28.3■■■□□ 2.12
NR1H3-208ENST00000436029 ATP10BO94823 1461 aa28.24■■■□□ 2.11
NR1H3-208ENST00000436029 NUP153P49790 1475 aaKnown RBP28.24■■■□□ 2.11
NR1H3-208ENST00000436029 CASKIN1Q8WXD9 1431 aa28.24■■■□□ 2.11
NR1H3-208ENST00000436029 ATP1B4Q9UN42 357 aaPredicted RBP28.21■■■□□ 2.11
NR1H3-208ENST00000436029 ZCCHC11Q5TAX3 1644 aaKnown RBP28.19■■■□□ 2.1
NR1H3-208ENST00000436029 ARID3CA6NKF2 412 aa28.18■■■□□ 2.1
NR1H3-208ENST00000436029 MAPKBP1O60336 1514 aa28.17■■■□□ 2.1
NR1H3-208ENST00000436029 HECW1Q76N89 1606 aa28.15■■■□□ 2.1
NR1H3-208ENST00000436029 VPS8Q8N3P4 1428 aa28.15■■■□□ 2.1
NR1H3-208ENST00000436029 FYCO1Q9BQS8 1478 aa28.15■■■□□ 2.1
NR1H3-208ENST00000436029 PCF11O94913 1555 aaKnown RBP28.14■■■□□ 2.1
NR1H3-208ENST00000436029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.13■■■□□ 2.09
NR1H3-208ENST00000436029 HNRNPUL2Q1KMD3 747 aaKnown RBP28.13■■■□□ 2.09
NR1H3-208ENST00000436029 EPRSP07814 1512 aaKnown RBP28.13■■■□□ 2.09
NR1H3-208ENST00000436029 ASXL2Q76L83 1435 aa28.12■■■□□ 2.09
NR1H3-208ENST00000436029 LRRIQ1Q96JM4 1722 aa28.07■■■□□ 2.08
NR1H3-208ENST00000436029 PLEKHD1A6NEE1 506 aa28.07■■■□□ 2.08
NR1H3-208ENST00000436029 CDK13Q14004 1512 aaKnown RBP28.05■■■□□ 2.08
NR1H3-208ENST00000436029 CDK11AQ9UQ88 783 aaPredicted RBP28.05■■■□□ 2.08
NR1H3-208ENST00000436029 CCDC18Q5T9S5 1454 aa28.04■■■□□ 2.08
NR1H3-208ENST00000436029 ABCC10Q5T3U5 1492 aa28.02■■■□□ 2.08
NR1H3-208ENST00000436029 WDR7Q9Y4E6 1490 aa28.02■■■□□ 2.08
NR1H3-208ENST00000436029 TRHP20396 242 aaPredicted RBP28.01■■■□□ 2.07
NR1H3-208ENST00000436029 KCNH8Q96L42 1107 aa27.99■■■□□ 2.07
NR1H3-208ENST00000436029 FAM69CQ0P6D2 419 aa27.98■■■□□ 2.07
NR1H3-208ENST00000436029 KIF13AQ9H1H9 1805 aa27.93■■■□□ 2.06
NR1H3-208ENST00000436029 DIP2BQ9P265 1576 aa27.93■■■□□ 2.06
NR1H3-208ENST00000436029 GLI2P10070 1586 aa27.91■■■□□ 2.06
NR1H3-208ENST00000436029 MAP3K1Q13233 1512 aa27.9■■■□□ 2.06
NR1H3-208ENST00000436029 TROQ12816 1431 aaPredicted RBP27.89■■■□□ 2.06
NR1H3-208ENST00000436029 APLP2Q06481 763 aa27.87■■■□□ 2.05
NR1H3-208ENST00000436029 MAGI3Q5TCQ9 1506 aa27.85■■■□□ 2.05
NR1H3-208ENST00000436029 TIAM1Q13009 1591 aa27.85■■■□□ 2.05
NR1H3-208ENST00000436029 MTUS2Q5JR59 1369 aa27.82■■■□□ 2.04
NR1H3-208ENST00000436029 CFAP43Q8NDM7 1665 aa27.81■■■□□ 2.04
NR1H3-208ENST00000436029 ABCA9Q8IUA7 1624 aa27.78■■■□□ 2.04
NR1H3-208ENST00000436029 KANK4Q5T7N3 995 aaPredicted RBP27.78■■■□□ 2.04
NR1H3-208ENST00000436029 CD109Q6YHK3 1445 aa27.77■■■□□ 2.04
NR1H3-208ENST00000436029 MAP3K4Q9Y6R4 1608 aa27.77■■■□□ 2.04
NR1H3-208ENST00000436029 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.76■■■□□ 2.03
NR1H3-208ENST00000436029 LRRC9Q6ZRR7 1453 aa27.76■■■□□ 2.03
NR1H3-208ENST00000436029 KIF14Q15058 1648 aa27.73■■■□□ 2.03
NR1H3-208ENST00000436029 TSPOAP1O95153 1857 aa27.72■■■□□ 2.03
NR1H3-208ENST00000436029 EHBP1L1Q8N3D4 1523 aa27.72■■■□□ 2.03
NR1H3-208ENST00000436029 TTC37Q6PGP7 1564 aa27.68■■■□□ 2.02
NR1H3-208ENST00000436029 PPRC1Q5VV67 1664 aaKnown RBP27.66■■■□□ 2.02
NR1H3-208ENST00000436029 PLCH2O75038 1416 aa27.66■■■□□ 2.02
NR1H3-208ENST00000436029 SUPT6HQ7KZ85 1726 aaKnown RBP27.63■■■□□ 2.01
NR1H3-208ENST00000436029 TEX14Q8IWB6 1497 aa27.61■■■□□ 2.01
NR1H3-208ENST00000436029 NCOA2Q15596 1464 aa27.6■■■□□ 2.01
NR1H3-208ENST00000436029 CCNB3Q8WWL7 1395 aa27.6■■■□□ 2.01
NR1H3-208ENST00000436029 MYO5CQ9NQX4 1742 aa27.59■■■□□ 2.01
NR1H3-208ENST00000436029 EFCAB2Q5VUJ9 269 aa27.59■■■□□ 2.01
NR1H3-208ENST00000436029 ARAP3Q8WWN8 1544 aa27.58■■■□□ 2.01
NR1H3-208ENST00000436029 GPATCH8Q9UKJ3 1502 aaKnown RBP27.58■■■□□ 2.01
NR1H3-208ENST00000436029 PHLDB1Q86UU1 1377 aa27.57■■■□□ 2
NR1H3-208ENST00000436029 CDC42BPAQ5VT25 1732 aa27.56■■■□□ 2
NR1H3-208ENST00000436029 CDC42BPBQ9Y5S2 1711 aa27.55■■■□□ 2
NR1H3-208ENST00000436029 NEO1Q92859 1461 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms