RNA–Protein interactions for RNA: ENST00000435954.2

CLNS1AP1-201, Transcript of chloride nucleotide-sensitive channel 1A pseudogene 1, humanhuman

BASIC

Gene CLNS1AP1, Length 682 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP1-201ENST00000435954 ATAD2BQ9ULI0 1458 aa13.72□□□□□ -0.21
CLNS1AP1-201ENST00000435954 LAMC3Q9Y6N6 1575 aa13.71□□□□□ -0.21
CLNS1AP1-201ENST00000435954 PRR29P0C7W0 189 aa13.71□□□□□ -0.21
CLNS1AP1-201ENST00000435954 KLHL34Q8N239 644 aa13.69□□□□□ -0.22
CLNS1AP1-201ENST00000435954 PDS5BQ9NTI5 1447 aa13.67□□□□□ -0.22
CLNS1AP1-201ENST00000435954 PLEKHG5O94827 1062 aa13.65□□□□□ -0.22
CLNS1AP1-201ENST00000435954 BAZ1AQ9NRL2 1556 aaPredicted RBP13.62□□□□□ -0.23
CLNS1AP1-201ENST00000435954 KIF21AQ7Z4S6 1674 aa13.61□□□□□ -0.23
CLNS1AP1-201ENST00000435954 SPOCK2Q92563 424 aa13.61□□□□□ -0.23
CLNS1AP1-201ENST00000435954 CREBZFQ9NS37 354 aa13.61□□□□□ -0.23
CLNS1AP1-201ENST00000435954 BAZ1BQ9UIG0 1483 aaKnown RBP13.61□□□□□ -0.23
CLNS1AP1-201ENST00000435954 ZBTB47Q9UFB7 747 aaPredicted RBP13.58□□□□□ -0.24
CLNS1AP1-201ENST00000435954 SMARCA4P51532 1647 aa13.56□□□□□ -0.24
CLNS1AP1-201ENST00000435954 MRC2Q9UBG0 1479 aa13.55□□□□□ -0.24
CLNS1AP1-201ENST00000435954 WDR62O43379 1518 aa13.53□□□□□ -0.24
CLNS1AP1-201ENST00000435954 MNX1P50219 401 aaPredicted RBP13.5□□□□□ -0.25
CLNS1AP1-201ENST00000435954 CHADLQ6NUI6 762 aa13.48□□□□□ -0.25
CLNS1AP1-201ENST00000435954 CHRDL2Q6WN34 429 aa13.48□□□□□ -0.25
CLNS1AP1-201ENST00000435954 PKD2Q13563 968 aa13.46□□□□□ -0.25
CLNS1AP1-201ENST00000435954 RIMBP3CA6NJZ7 1639 aa13.46□□□□□ -0.26
CLNS1AP1-201ENST00000435954 RIMBP3BA6NNM3 1639 aa13.46□□□□□ -0.26
CLNS1AP1-201ENST00000435954 RIMBP3Q9UFD9 1639 aa13.46□□□□□ -0.26
CLNS1AP1-201ENST00000435954 PEG3Q9GZU2 1588 aa13.45□□□□□ -0.26
CLNS1AP1-201ENST00000435954 FXR2P51116 673 aaKnown RBP eCLIP13.45□□□□□ -0.26
CLNS1AP1-201ENST00000435954 CADPSQ9ULU8 1353 aa13.43□□□□□ -0.26
CLNS1AP1-201ENST00000435954 NUBP1P53384 320 aa13.42□□□□□ -0.26
CLNS1AP1-201ENST00000435954 PRKAR2AP13861 404 aaKnown RBP13.4□□□□□ -0.26
CLNS1AP1-201ENST00000435954 CEP164Q9UPV0 1460 aa13.38□□□□□ -0.27
CLNS1AP1-201ENST00000435954 ARHGEF11O15085 1522 aa13.38□□□□□ -0.27
CLNS1AP1-201ENST00000435954 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
CLNS1AP1-201ENST00000435954 CIZ1Q9ULV3 898 aaPredicted RBP13.37□□□□□ -0.27
CLNS1AP1-201ENST00000435954 NPM1P06748 294 aaKnown RBP eCLIP13.36□□□□□ -0.27
CLNS1AP1-201ENST00000435954 FARP1Q9Y4F1 1045 aaPredicted RBP13.35□□□□□ -0.27
CLNS1AP1-201ENST00000435954 ECM2O94769 699 aaPredicted RBP13.32□□□□□ -0.28
CLNS1AP1-201ENST00000435954 RASEFQ8IZ41 740 aa13.31□□□□□ -0.28
CLNS1AP1-201ENST00000435954 GSE1Q14687 1217 aa13.3□□□□□ -0.28
CLNS1AP1-201ENST00000435954 DCAF8Q5TAQ9 597 aa13.3□□□□□ -0.28
CLNS1AP1-201ENST00000435954 CYB5RLQ6IPT4 315 aa13.28□□□□□ -0.28
CLNS1AP1-201ENST00000435954 FANCD2Q9BXW9 1451 aa13.28□□□□□ -0.28
CLNS1AP1-201ENST00000435954 FAM212AQ96EL1 285 aa13.27□□□□□ -0.29
CLNS1AP1-201ENST00000435954 RGL2O15211 777 aa13.2□□□□□ -0.3
CLNS1AP1-201ENST00000435954 MROH2BQ7Z745 1585 aa13.18□□□□□ -0.3
CLNS1AP1-201ENST00000435954 ARAP1Q96P48 1450 aa13.17□□□□□ -0.3
CLNS1AP1-201ENST00000435954 TSPYL2Q9H2G4 693 aaPredicted RBP13.17□□□□□ -0.3
CLNS1AP1-201ENST00000435954 RSF1Q96T23 1441 aaPredicted RBP13.16□□□□□ -0.3
CLNS1AP1-201ENST00000435954 URB2Q14146 1524 aaKnown RBP13.15□□□□□ -0.3
CLNS1AP1-201ENST00000435954 IFT140Q96RY7 1462 aa13.14□□□□□ -0.31
CLNS1AP1-201ENST00000435954 CFTRP13569 1480 aa13.13□□□□□ -0.31
CLNS1AP1-201ENST00000435954 CHRM1P11229 460 aaPredicted RBP13.11□□□□□ -0.31
CLNS1AP1-201ENST00000435954 PYGBP11216 843 aa13.1□□□□□ -0.31
CLNS1AP1-201ENST00000435954 RNF25Q96BH1 459 aaPredicted RBP13.09□□□□□ -0.31
CLNS1AP1-201ENST00000435954 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.32
CLNS1AP1-201ENST00000435954 PAK3O75914 559 aaPredicted RBP13.06□□□□□ -0.32
CLNS1AP1-201ENST00000435954 CCDC61Q9Y6R9 512 aa13.06□□□□□ -0.32
CLNS1AP1-201ENST00000435954 EIF4G3O43432 1585 aaKnown RBP13.04□□□□□ -0.32
CLNS1AP1-201ENST00000435954 CHD1O14646 1710 aa13.03□□□□□ -0.32
CLNS1AP1-201ENST00000435954 CD44P16070 742 aaKnown RBP13.03□□□□□ -0.32
CLNS1AP1-201ENST00000435954 RIOK3O14730 519 aaKnown RBP13.01□□□□□ -0.33
CLNS1AP1-201ENST00000435954 C19orf67A6NJJ6 358 aa12.99□□□□□ -0.33
CLNS1AP1-201ENST00000435954 ZRANB1Q9UGI0 708 aa12.99□□□□□ -0.33
CLNS1AP1-201ENST00000435954 WIZO95785 1651 aa12.99□□□□□ -0.33
CLNS1AP1-201ENST00000435954 PRDM2Q13029 1718 aa12.98□□□□□ -0.33
CLNS1AP1-201ENST00000435954 ABCC8Q09428 1581 aa12.97□□□□□ -0.33
CLNS1AP1-201ENST00000435954 CHGAP10645 457 aaKnown RBP12.95□□□□□ -0.34
CLNS1AP1-201ENST00000435954 TOPBP1Q92547 1522 aa12.93□□□□□ -0.34
CLNS1AP1-201ENST00000435954 VGFO15240 615 aaPredicted RBP12.93□□□□□ -0.34
CLNS1AP1-201ENST00000435954 ILDR1Q86SU0 546 aaPredicted RBP12.93□□□□□ -0.34
CLNS1AP1-201ENST00000435954 TAOK2Q9UL54 1235 aa12.93□□□□□ -0.34
CLNS1AP1-201ENST00000435954 KIF12Q96FN5 646 aa12.92□□□□□ -0.34
CLNS1AP1-201ENST00000435954 BBXQ8WY36 941 aaPredicted RBP12.91□□□□□ -0.34
CLNS1AP1-201ENST00000435954 MAP3K13O43283 966 aa12.9□□□□□ -0.34
CLNS1AP1-201ENST00000435954 ZNF467Q7Z7K2 595 aaPredicted RBP12.9□□□□□ -0.34
CLNS1AP1-201ENST00000435954 PHF12Q96QT6 1004 aa12.9□□□□□ -0.34
CLNS1AP1-201ENST00000435954 PCDHB8Q9UN66 801 aa12.9□□□□□ -0.34
CLNS1AP1-201ENST00000435954 PCDHB13Q9Y5F0 798 aa12.9□□□□□ -0.34
CLNS1AP1-201ENST00000435954 SYNJ1O43426 1573 aa12.9□□□□□ -0.35
CLNS1AP1-201ENST00000435954 HS6ST3Q8IZP7 471 aa12.89□□□□□ -0.35
CLNS1AP1-201ENST00000435954 SGIP1Q9BQI5 828 aa12.89□□□□□ -0.35
CLNS1AP1-201ENST00000435954 CLASP1Q7Z460 1538 aa12.88□□□□□ -0.35
CLNS1AP1-201ENST00000435954 ZNF579Q8NAF0 562 aaKnown RBP12.88□□□□□ -0.35
CLNS1AP1-201ENST00000435954 AQRO60306 1485 aaKnown RBP eCLIP12.88□□□□□ -0.35
CLNS1AP1-201ENST00000435954 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.87□□□□□ -0.35
CLNS1AP1-201ENST00000435954 HAX1O00165 279 aa12.87□□□□□ -0.35
CLNS1AP1-201ENST00000435954 ZFP91Q96JP5 570 aaPredicted RBP12.87□□□□□ -0.35
CLNS1AP1-201ENST00000435954 TOP2AP11388 1531 aaKnown RBP12.87□□□□□ -0.35
CLNS1AP1-201ENST00000435954 DNMBPQ6XZF7 1577 aa12.86□□□□□ -0.35
CLNS1AP1-201ENST00000435954 IFNL1Q8IU54 200 aa12.85□□□□□ -0.35
CLNS1AP1-201ENST00000435954 STK25O00506 426 aa12.84□□□□□ -0.35
CLNS1AP1-201ENST00000435954 SLC24A1O60721 1099 aa12.84□□□□□ -0.35
CLNS1AP1-201ENST00000435954 TARBP1Q13395 1621 aaKnown RBP12.84□□□□□ -0.35
CLNS1AP1-201ENST00000435954 PLCB2Q00722 1185 aa12.83□□□□□ -0.36
CLNS1AP1-201ENST00000435954 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.83□□□□□ -0.36
CLNS1AP1-201ENST00000435954 WDR97A6NE52 1622 aa12.82□□□□□ -0.36
CLNS1AP1-201ENST00000435954 EVX2Q03828 476 aa12.82□□□□□ -0.36
CLNS1AP1-201ENST00000435954 GAPVD1Q14C86 1478 aa12.82□□□□□ -0.36
CLNS1AP1-201ENST00000435954 PDAP1Q13442 181 aaKnown RBP12.81□□□□□ -0.36
CLNS1AP1-201ENST00000435954 POTEHQ6S545 545 aa12.81□□□□□ -0.36
CLNS1AP1-201ENST00000435954 CHMP7Q8WUX9 453 aaPredicted RBP12.81□□□□□ -0.36
CLNS1AP1-201ENST00000435954 BCL11BQ9C0K0 894 aaPredicted RBP12.8□□□□□ -0.36
CLNS1AP1-201ENST00000435954 SNAPC4Q5SXM2 1469 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms