RNA–Protein interactions for RNA: ENST00000435811.5

GABRR1-202, Transcript of gamma-aminobutyric acid type A receptor rho1 subunit, humanhuman

TSL 2 BASIC

Gene GABRR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR1-202ENST00000435811 CFAP44Q96MT7 982 aa12.28□□□□□ -0.44
GABRR1-202ENST00000435811 NPM1P06748 294 aaKnown RBP eCLIP12.28□□□□□ -0.44
GABRR1-202ENST00000435811 PLEKHG5O94827 1062 aa12.27□□□□□ -0.45
GABRR1-202ENST00000435811 TOP2AP11388 1531 aaKnown RBP12.26□□□□□ -0.45
GABRR1-202ENST00000435811 PABPN1Q86U42 306 aaKnown RBP eCLIP12.25□□□□□ -0.45
GABRR1-202ENST00000435811 SMARCA2P51531 1590 aa12.24□□□□□ -0.45
GABRR1-202ENST00000435811 BCL11AQ9H165 835 aa12.24□□□□□ -0.45
GABRR1-202ENST00000435811 GOLGA3Q08378 1498 aa12.23□□□□□ -0.45
GABRR1-202ENST00000435811 TSHZ2Q9NRE2 1034 aa12.21□□□□□ -0.45
GABRR1-202ENST00000435811 EEA1Q15075 1411 aa12.2□□□□□ -0.46
GABRR1-202ENST00000435811 VASPP50552 380 aaPredicted RBP12.2□□□□□ -0.46
GABRR1-202ENST00000435811 SMARCA4P51532 1647 aa12.19□□□□□ -0.46
GABRR1-202ENST00000435811 CLIP1P30622 1438 aa12.18□□□□□ -0.46
GABRR1-202ENST00000435811 HOXD11P31277 338 aaPredicted RBP12.13□□□□□ -0.47
GABRR1-202ENST00000435811 CEP164Q9UPV0 1460 aa12.11□□□□□ -0.47
GABRR1-202ENST00000435811 FBXO3Q9UK99 471 aa12.11□□□□□ -0.47
GABRR1-202ENST00000435811 VPS8Q8N3P4 1428 aa12.1□□□□□ -0.47
GABRR1-202ENST00000435811 RAPGEF2Q9Y4G8 1499 aa12.09□□□□□ -0.47
GABRR1-202ENST00000435811 ITGAEP38570 1179 aa12.08□□□□□ -0.48
GABRR1-202ENST00000435811 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.07□□□□□ -0.48
GABRR1-202ENST00000435811 SUPT16HQ9Y5B9 1047 aaKnown RBP12.07□□□□□ -0.48
GABRR1-202ENST00000435811 KANK4Q5T7N3 995 aaPredicted RBP12.06□□□□□ -0.48
GABRR1-202ENST00000435811 SYNJ1O43426 1573 aa12.06□□□□□ -0.48
GABRR1-202ENST00000435811 BBXQ8WY36 941 aaPredicted RBP12.04□□□□□ -0.48
GABRR1-202ENST00000435811 TMEM132AQ24JP5 1023 aa12.04□□□□□ -0.48
GABRR1-202ENST00000435811 DHX57Q6P158 1386 aaKnown RBP12.03□□□□□ -0.48
GABRR1-202ENST00000435811 HOMEZQ8IX15 550 aa12.03□□□□□ -0.48
GABRR1-202ENST00000435811 SPDYE4A6NLX3 237 aa12.02□□□□□ -0.48
GABRR1-202ENST00000435811 KCNH8Q96L42 1107 aa12.02□□□□□ -0.49
GABRR1-202ENST00000435811 KIF21BO75037 1637 aa12□□□□□ -0.49
GABRR1-202ENST00000435811 PODXL2Q9NZ53 605 aa11.99□□□□□ -0.49
GABRR1-202ENST00000435811 UNC13AQ9UPW8 1703 aa11.95□□□□□ -0.5
GABRR1-202ENST00000435811 CLSPNQ9HAW4 1339 aa11.94□□□□□ -0.5
GABRR1-202ENST00000435811 NBR1Q14596 966 aa11.94□□□□□ -0.5
GABRR1-202ENST00000435811 BAZ1BQ9UIG0 1483 aaKnown RBP11.94□□□□□ -0.5
GABRR1-202ENST00000435811 RGL2O15211 777 aa11.94□□□□□ -0.5
GABRR1-202ENST00000435811 C14orf37Q86TY3 774 aa11.93□□□□□ -0.5
GABRR1-202ENST00000435811 DMRT2Q9Y5R5 561 aa11.93□□□□□ -0.5
GABRR1-202ENST00000435811 ECM2O94769 699 aaPredicted RBP11.91□□□□□ -0.5
GABRR1-202ENST00000435811 SPRYD3Q8NCJ5 442 aa11.91□□□□□ -0.5
GABRR1-202ENST00000435811 ATAD2BQ9ULI0 1458 aa11.9□□□□□ -0.5
GABRR1-202ENST00000435811 DDX10Q13206 875 aaKnown RBP11.89□□□□□ -0.51
GABRR1-202ENST00000435811 MKRN4PQ13434 485 aaPredicted RBP11.89□□□□□ -0.51
GABRR1-202ENST00000435811 HIRIP3Q9BW71 556 aaPredicted RBP11.89□□□□□ -0.51
GABRR1-202ENST00000435811 ARAP1Q96P48 1450 aa11.89□□□□□ -0.51
GABRR1-202ENST00000435811 BICRAQ9NZM4 1560 aa11.88□□□□□ -0.51
GABRR1-202ENST00000435811 PROM2Q8N271 834 aa11.87□□□□□ -0.51
GABRR1-202ENST00000435811 CCNB3Q8WWL7 1395 aa11.86□□□□□ -0.51
GABRR1-202ENST00000435811 SIN3AQ96ST3 1273 aa11.86□□□□□ -0.51
GABRR1-202ENST00000435811 ATP1B4Q9UN42 357 aaPredicted RBP11.84□□□□□ -0.51
GABRR1-202ENST00000435811 PRXQ9BXM0 1461 aa11.83□□□□□ -0.52
GABRR1-202ENST00000435811 PEG3Q9GZU2 1588 aa11.83□□□□□ -0.52
GABRR1-202ENST00000435811 RAB3GAP2Q9H2M9 1393 aa11.83□□□□□ -0.52
GABRR1-202ENST00000435811 FAM50AQ14320 339 aaKnown RBP11.82□□□□□ -0.52
GABRR1-202ENST00000435811 RRBP1Q9P2E9 1410 aaKnown RBP11.82□□□□□ -0.52
GABRR1-202ENST00000435811 TRIM52Q96A61 297 aa11.82□□□□□ -0.52
GABRR1-202ENST00000435811 ANP32EQ9BTT0 268 aa11.81□□□□□ -0.52
GABRR1-202ENST00000435811 TOP2BQ02880 1626 aa11.8□□□□□ -0.52
GABRR1-202ENST00000435811 P3H3Q8IVL6 736 aa11.8□□□□□ -0.52
GABRR1-202ENST00000435811 MSH5O43196 834 aa11.79□□□□□ -0.52
GABRR1-202ENST00000435811 ZNF219Q9P2Y4 722 aaPredicted RBP11.79□□□□□ -0.52
GABRR1-202ENST00000435811 CUX2O14529 1486 aa11.79□□□□□ -0.52
GABRR1-202ENST00000435811 CHGAP10645 457 aaKnown RBP11.77□□□□□ -0.53
GABRR1-202ENST00000435811 KIF27Q86VH2 1401 aa11.76□□□□□ -0.53
GABRR1-202ENST00000435811 DNAJC5Q9H3Z4 198 aa11.76□□□□□ -0.53
GABRR1-202ENST00000435811 ARHGAP35Q9NRY4 1499 aa11.76□□□□□ -0.53
GABRR1-202ENST00000435811 ERICH3Q5RHP9 1530 aa11.75□□□□□ -0.53
GABRR1-202ENST00000435811 U3KPZ7 1027 aaPredicted RBP11.74□□□□□ -0.53
GABRR1-202ENST00000435811 NEFLP07196 543 aa11.73□□□□□ -0.53
GABRR1-202ENST00000435811 MAPKBP1O60336 1514 aa11.72□□□□□ -0.53
GABRR1-202ENST00000435811 SETD5Q9C0A6 1442 aa11.72□□□□□ -0.53
GABRR1-202ENST00000435811 CUX1P39880 1505 aa11.72□□□□□ -0.53
GABRR1-202ENST00000435811 PPP1R15AO75807 674 aaPredicted RBP11.71□□□□□ -0.53
GABRR1-202ENST00000435811 RBM19Q9Y4C8 960 aaKnown RBP11.71□□□□□ -0.54
GABRR1-202ENST00000435811 PHLDB1Q86UU1 1377 aa11.71□□□□□ -0.54
GABRR1-202ENST00000435811 WDR97A6NE52 1622 aa11.7□□□□□ -0.54
GABRR1-202ENST00000435811 ANP32CO43423 234 aa11.7□□□□□ -0.54
GABRR1-202ENST00000435811 NPM2Q86SE8 214 aaKnown RBP11.7□□□□□ -0.54
GABRR1-202ENST00000435811 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
GABRR1-202ENST00000435811 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.67□□□□□ -0.54
GABRR1-202ENST00000435811 IRX6P78412 446 aaPredicted RBP11.67□□□□□ -0.54
GABRR1-202ENST00000435811 IGF1RP08069 1367 aa11.67□□□□□ -0.54
GABRR1-202ENST00000435811 TRHP20396 242 aaPredicted RBP11.66□□□□□ -0.54
GABRR1-202ENST00000435811 SAMD1Q6SPF0 538 aaPredicted RBP11.66□□□□□ -0.54
GABRR1-202ENST00000435811 DCAF8L1A6NGE4 600 aa11.65□□□□□ -0.54
GABRR1-202ENST00000435811 SPOCK2Q92563 424 aa11.64□□□□□ -0.55
GABRR1-202ENST00000435811 CARMIL1Q5VZK9 1371 aa11.63□□□□□ -0.55
GABRR1-202ENST00000435811 LRRC9Q6ZRR7 1453 aa11.62□□□□□ -0.55
GABRR1-202ENST00000435811 CCER2I3L3R5 266 aa11.61□□□□□ -0.55
GABRR1-202ENST00000435811 HNRNPUQ00839 825 aaKnown RBP eCLIP11.6□□□□□ -0.55
GABRR1-202ENST00000435811 TIAM1Q13009 1591 aa11.6□□□□□ -0.55
GABRR1-202ENST00000435811 TONSLQ96HA7 1378 aa11.59□□□□□ -0.55
GABRR1-202ENST00000435811 PDIA4P13667 645 aaKnown RBP11.58□□□□□ -0.56
GABRR1-202ENST00000435811 CFTRP13569 1480 aa11.57□□□□□ -0.56
GABRR1-202ENST00000435811 FHOD3Q2V2M9 1422 aa11.56□□□□□ -0.56
GABRR1-202ENST00000435811 NCAPD3P42695 1498 aa11.56□□□□□ -0.56
GABRR1-202ENST00000435811 CC2D2AQ9P2K1 1620 aa11.56□□□□□ -0.56
GABRR1-202ENST00000435811 FHAD1B1AJZ9 1412 aa11.53□□□□□ -0.56
GABRR1-202ENST00000435811 UBE2Q2Q8WVN8 375 aa11.53□□□□□ -0.56
GABRR1-202ENST00000435811 NKX1-1Q15270 411 aaPredicted RBP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms