RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 JPH4Q96JJ6 628 aa25.07■■□□□ 1.6
LINC01006-204ENST00000435354 CUL7Q14999 1698 aa25.05■■□□□ 1.6
LINC01006-204ENST00000435354 KIAA0586Q9BVV6 1533 aa24.97■■□□□ 1.59
LINC01006-204ENST00000435354 CARMIL1Q5VZK9 1371 aa24.92■■□□□ 1.58
LINC01006-204ENST00000435354 ADCY10Q96PN6 1610 aa24.83■■□□□ 1.56
LINC01006-204ENST00000435354 KIF13AQ9H1H9 1805 aa24.82■■□□□ 1.56
LINC01006-204ENST00000435354 IQGAP2Q13576 1575 aa24.76■■□□□ 1.55
LINC01006-204ENST00000435354 MAPKBP1O60336 1514 aa24.74■■□□□ 1.55
LINC01006-204ENST00000435354 RAPGEF2Q9Y4G8 1499 aa24.71■■□□□ 1.55
LINC01006-204ENST00000435354 NPM1P06748 294 aaKnown RBP eCLIP24.7■■□□□ 1.54
LINC01006-204ENST00000435354 ABCC10Q5T3U5 1492 aa24.7■■□□□ 1.54
LINC01006-204ENST00000435354 PTPRGP23470 1445 aa24.69■■□□□ 1.54
LINC01006-204ENST00000435354 CARMIL2Q6F5E8 1435 aa24.69■■□□□ 1.54
LINC01006-204ENST00000435354 TNIKQ9UKE5 1360 aa24.67■■□□□ 1.54
LINC01006-204ENST00000435354 DIP2BQ9P265 1576 aa24.66■■□□□ 1.54
LINC01006-204ENST00000435354 DISP1Q96F81 1524 aa24.65■■□□□ 1.54
LINC01006-204ENST00000435354 FAM69CQ0P6D2 419 aa24.63■■□□□ 1.53
LINC01006-204ENST00000435354 TTBK1Q5TCY1 1321 aaPredicted RBP24.62■■□□□ 1.53
LINC01006-204ENST00000435354 UGGT2Q9NYU1 1516 aa24.61■■□□□ 1.53
LINC01006-204ENST00000435354 ABCC2Q92887 1545 aa24.57■■□□□ 1.52
LINC01006-204ENST00000435354 UHRF1BP1LA0JNW5 1464 aa24.55■■□□□ 1.52
LINC01006-204ENST00000435354 KIAA0556O60303 1618 aa24.54■■□□□ 1.52
LINC01006-204ENST00000435354 CTTNBP2Q8WZ74 1663 aa24.53■■□□□ 1.52
LINC01006-204ENST00000435354 UACAQ9BZF9 1416 aa24.52■■□□□ 1.52
LINC01006-204ENST00000435354 PRXQ9BXM0 1461 aa24.52■■□□□ 1.52
LINC01006-204ENST00000435354 TSPOAP1O95153 1857 aa24.48■■□□□ 1.51
LINC01006-204ENST00000435354 ASXL2Q76L83 1435 aa24.48■■□□□ 1.51
LINC01006-204ENST00000435354 KDM5BQ9UGL1 1544 aa24.44■■□□□ 1.5
LINC01006-204ENST00000435354 PLB1Q6P1J6 1458 aa24.44■■□□□ 1.5
LINC01006-204ENST00000435354 ZCCHC11Q5TAX3 1644 aaKnown RBP24.4■■□□□ 1.5
LINC01006-204ENST00000435354 GLI2P10070 1586 aa24.4■■□□□ 1.5
LINC01006-204ENST00000435354 AEBP2Q6ZN18 517 aaPredicted RBP24.39■■□□□ 1.49
LINC01006-204ENST00000435354 KDM6BO15054 1643 aa24.39■■□□□ 1.49
LINC01006-204ENST00000435354 GOLGA3Q08378 1498 aa24.38■■□□□ 1.49
LINC01006-204ENST00000435354 PPRC1Q5VV67 1664 aaKnown RBP24.37■■□□□ 1.49
LINC01006-204ENST00000435354 EPRSP07814 1512 aaKnown RBP24.33■■□□□ 1.49
LINC01006-204ENST00000435354 ABCA8O94911 1581 aa24.32■■□□□ 1.48
LINC01006-204ENST00000435354 CSRNP3Q8WYN3 585 aa24.31■■□□□ 1.48
LINC01006-204ENST00000435354 MAP3K4Q9Y6R4 1608 aa24.29■■□□□ 1.48
LINC01006-204ENST00000435354 WDR7Q9Y4E6 1490 aa24.26■■□□□ 1.47
LINC01006-204ENST00000435354 EEA1Q15075 1411 aa24.23■■□□□ 1.47
LINC01006-204ENST00000435354 SAMD9Q5K651 1589 aa24.2■■□□□ 1.46
LINC01006-204ENST00000435354 P3H3Q8IVL6 736 aa24.18■■□□□ 1.46
LINC01006-204ENST00000435354 COL17A1Q9UMD9 1497 aaPredicted RBP24.18■■□□□ 1.46
LINC01006-204ENST00000435354 TEX14Q8IWB6 1497 aa24.16■■□□□ 1.46
LINC01006-204ENST00000435354 FAM9AQ8IZU1 332 aaPredicted RBP24.12■■□□□ 1.45
LINC01006-204ENST00000435354 CFAP43Q8NDM7 1665 aa24.11■■□□□ 1.45
LINC01006-204ENST00000435354 KDM4FA0A1W2PPD8 638 aa24.1■■□□□ 1.45
LINC01006-204ENST00000435354 KCNH8Q96L42 1107 aa24.1■■□□□ 1.45
LINC01006-204ENST00000435354 ATP10BO94823 1461 aa24.1■■□□□ 1.45
LINC01006-204ENST00000435354 ARID3CA6NKF2 412 aa24.09■■□□□ 1.45
LINC01006-204ENST00000435354 KIF21BO75037 1637 aa24.08■■□□□ 1.45
LINC01006-204ENST00000435354 CD109Q6YHK3 1445 aa24.08■■□□□ 1.44
LINC01006-204ENST00000435354 MAGI3Q5TCQ9 1506 aa24.07■■□□□ 1.44
LINC01006-204ENST00000435354 RAPGEF6Q8TEU7 1601 aa24.06■■□□□ 1.44
LINC01006-204ENST00000435354 FHOD3Q2V2M9 1422 aa24.02■■□□□ 1.44
LINC01006-204ENST00000435354 RANGAP1P46060 587 aaPredicted RBP24.02■■□□□ 1.44
LINC01006-204ENST00000435354 NUP153P49790 1475 aaKnown RBP24■■□□□ 1.43
LINC01006-204ENST00000435354 CHIC1Q5VXU3 224 aa23.99■■□□□ 1.43
LINC01006-204ENST00000435354 ABCA9Q8IUA7 1624 aa23.96■■□□□ 1.43
LINC01006-204ENST00000435354 EFCAB5A4FU69 1503 aa23.95■■□□□ 1.43
LINC01006-204ENST00000435354 ADGRL1O94910 1474 aa23.94■■□□□ 1.42
LINC01006-204ENST00000435354 ARAP3Q8WWN8 1544 aa23.89■■□□□ 1.41
LINC01006-204ENST00000435354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.88■■□□□ 1.41
LINC01006-204ENST00000435354 HNRNPUL2Q1KMD3 747 aaKnown RBP23.88■■□□□ 1.41
LINC01006-204ENST00000435354 EHMT2Q96KQ7 1210 aa23.86■■□□□ 1.41
LINC01006-204ENST00000435354 UBTFP17480 764 aaKnown RBP23.83■■□□□ 1.41
LINC01006-204ENST00000435354 PHLDB1Q86UU1 1377 aa23.8■■□□□ 1.4
LINC01006-204ENST00000435354 NEO1Q92859 1461 aa23.8■■□□□ 1.4
LINC01006-204ENST00000435354 PLEKHD1A6NEE1 506 aa23.78■■□□□ 1.4
LINC01006-204ENST00000435354 ARHGAP35Q9NRY4 1499 aa23.78■■□□□ 1.4
LINC01006-204ENST00000435354 CDK13Q14004 1512 aaKnown RBP23.78■■□□□ 1.4
LINC01006-204ENST00000435354 FRMPD1Q5SYB0 1578 aa23.74■■□□□ 1.39
LINC01006-204ENST00000435354 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.74■■□□□ 1.39
LINC01006-204ENST00000435354 RAPGEF3O95398 923 aa23.73■■□□□ 1.39
LINC01006-204ENST00000435354 TTC37Q6PGP7 1564 aa23.73■■□□□ 1.39
LINC01006-204ENST00000435354 FMN1Q68DA7 1419 aa23.72■■□□□ 1.39
LINC01006-204ENST00000435354 HECW1Q76N89 1606 aa23.69■■□□□ 1.38
LINC01006-204ENST00000435354 FANCAO15360 1455 aa23.67■■□□□ 1.38
LINC01006-204ENST00000435354 AKNAQ7Z591 1439 aa23.65■■□□□ 1.38
LINC01006-204ENST00000435354 CFAP74Q9C0B2 1584 aa23.65■■□□□ 1.38
LINC01006-204ENST00000435354 RICTORQ6R327 1708 aa23.64■■□□□ 1.38
LINC01006-204ENST00000435354 ATP1B4Q9UN42 357 aaPredicted RBP23.63■■□□□ 1.37
LINC01006-204ENST00000435354 DENND4BO75064 1496 aaPredicted RBP23.62■■□□□ 1.37
LINC01006-204ENST00000435354 LRRIQ1Q96JM4 1722 aa23.61■■□□□ 1.37
LINC01006-204ENST00000435354 ARHGEF40Q8TER5 1519 aa23.59■■□□□ 1.37
LINC01006-204ENST00000435354 ADAMTSL3P82987 1691 aa23.58■■□□□ 1.37
LINC01006-204ENST00000435354 HECW2Q9P2P5 1572 aa23.58■■□□□ 1.37
LINC01006-204ENST00000435354 PLCH2O75038 1416 aa23.58■■□□□ 1.36
LINC01006-204ENST00000435354 KIF14Q15058 1648 aa23.56■■□□□ 1.36
LINC01006-204ENST00000435354 ZMYM4Q5VZL5 1548 aa23.55■■□□□ 1.36
LINC01006-204ENST00000435354 BCORL1Q5H9F3 1711 aa23.53■■□□□ 1.36
LINC01006-204ENST00000435354 MYO5CQ9NQX4 1742 aa23.53■■□□□ 1.36
LINC01006-204ENST00000435354 TROQ12816 1431 aaPredicted RBP23.53■■□□□ 1.36
LINC01006-204ENST00000435354 CDK11AQ9UQ88 783 aaPredicted RBP23.53■■□□□ 1.36
LINC01006-204ENST00000435354 PCF11O94913 1555 aaKnown RBP23.52■■□□□ 1.36
LINC01006-204ENST00000435354 CASKIN1Q8WXD9 1431 aa23.5■■□□□ 1.35
LINC01006-204ENST00000435354 POGZQ7Z3K3 1410 aa23.49■■□□□ 1.35
LINC01006-204ENST00000435354 SCAPERQ9BY12 1400 aa23.49■■□□□ 1.35
LINC01006-204ENST00000435354 YEATS2Q9ULM3 1422 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 185.8 ms