RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 FANCIQ9NVI1 1328 aa10.31□□□□□ -0.76
GARNL3-205ENST00000435213 MSH5O43196 834 aa10.3□□□□□ -0.76
GARNL3-205ENST00000435213 ZMYND15Q9H091 742 aa10.29□□□□□ -0.76
GARNL3-205ENST00000435213 DNAJC5BQ9UF47 199 aa10.28□□□□□ -0.76
GARNL3-205ENST00000435213 CLIP1P30622 1438 aa10.28□□□□□ -0.76
GARNL3-205ENST00000435213 HNRNPUL2Q1KMD3 747 aaKnown RBP10.25□□□□□ -0.77
GARNL3-205ENST00000435213 SYNJ1O43426 1573 aa10.25□□□□□ -0.77
GARNL3-205ENST00000435213 CC2D2AQ9P2K1 1620 aa10.24□□□□□ -0.77
GARNL3-205ENST00000435213 A0A0U1RQG5 324 aaPredicted RBP10.24□□□□□ -0.77
GARNL3-205ENST00000435213 VSIG10Q8N0Z9 540 aa10.23□□□□□ -0.77
GARNL3-205ENST00000435213 TAF7LQ5H9L4 462 aa10.23□□□□□ -0.77
GARNL3-205ENST00000435213 IL27Q8NEV9 243 aa10.23□□□□□ -0.77
GARNL3-205ENST00000435213 RTN4Q9NQC3 1192 aaKnown RBP10.23□□□□□ -0.77
GARNL3-205ENST00000435213 AAMPQ13685 434 aa10.21□□□□□ -0.77
GARNL3-205ENST00000435213 BCL11BQ9C0K0 894 aaPredicted RBP10.21□□□□□ -0.78
GARNL3-205ENST00000435213 DHX57Q6P158 1386 aaKnown RBP10.2□□□□□ -0.78
GARNL3-205ENST00000435213 RSPH6AQ9H0K4 717 aa10.2□□□□□ -0.78
GARNL3-205ENST00000435213 RBM10P98175 930 aaKnown RBP10.18□□□□□ -0.78
GARNL3-205ENST00000435213 RTL5Q5HYW3 569 aaPredicted RBP10.17□□□□□ -0.78
GARNL3-205ENST00000435213 CUX2O14529 1486 aa10.17□□□□□ -0.78
GARNL3-205ENST00000435213 ERICH3Q5RHP9 1530 aa10.16□□□□□ -0.78
GARNL3-205ENST00000435213 RAPGEF2Q9Y4G8 1499 aa10.16□□□□□ -0.78
GARNL3-205ENST00000435213 BIVM-ERCC5R4GMW8 1640 aa10.14□□□□□ -0.79
GARNL3-205ENST00000435213 TOP2BQ02880 1626 aa10.13□□□□□ -0.79
GARNL3-205ENST00000435213 RRBP1Q9P2E9 1410 aaKnown RBP10.13□□□□□ -0.79
GARNL3-205ENST00000435213 TIMELESSQ9UNS1 1208 aa10.11□□□□□ -0.79
GARNL3-205ENST00000435213 ARAP1Q96P48 1450 aa10.11□□□□□ -0.79
GARNL3-205ENST00000435213 BCANQ96GW7 911 aa10.1□□□□□ -0.79
GARNL3-205ENST00000435213 ZNF326Q5BKZ1 582 aaKnown RBP10.09□□□□□ -0.79
GARNL3-205ENST00000435213 C11orf95C9JLR9 678 aaPredicted RBP10.07□□□□□ -0.8
GARNL3-205ENST00000435213 NBR1Q14596 966 aa10.07□□□□□ -0.8
GARNL3-205ENST00000435213 AEBP2Q6ZN18 517 aaPredicted RBP10.07□□□□□ -0.8
GARNL3-205ENST00000435213 CFTRP13569 1480 aa10.07□□□□□ -0.8
GARNL3-205ENST00000435213 PRXQ9BXM0 1461 aa10.06□□□□□ -0.8
GARNL3-205ENST00000435213 HOMEZQ8IX15 550 aa10.06□□□□□ -0.8
GARNL3-205ENST00000435213 FKBP8Q14318 412 aa10.05□□□□□ -0.8
GARNL3-205ENST00000435213 LAMC3Q9Y6N6 1575 aa10.05□□□□□ -0.8
GARNL3-205ENST00000435213 CDK11AQ9UQ88 783 aaPredicted RBP10.05□□□□□ -0.8
GARNL3-205ENST00000435213 NOP58Q9Y2X3 529 aaKnown RBP10.03□□□□□ -0.8
GARNL3-205ENST00000435213 MAPKBP1O60336 1514 aa10.02□□□□□ -0.8
GARNL3-205ENST00000435213 CCNB3Q8WWL7 1395 aa10.02□□□□□ -0.81
GARNL3-205ENST00000435213 WDR97A6NE52 1622 aa10.02□□□□□ -0.81
GARNL3-205ENST00000435213 MAP3K1Q13233 1512 aa10□□□□□ -0.81
GARNL3-205ENST00000435213 BRD2P25440 801 aaKnown RBP9.99□□□□□ -0.81
GARNL3-205ENST00000435213 KANK4Q5T7N3 995 aaPredicted RBP9.98□□□□□ -0.81
GARNL3-205ENST00000435213 RRP9O43818 475 aaKnown RBP9.96□□□□□ -0.81
GARNL3-205ENST00000435213 HSP90AA2PQ14568 343 aaPredicted RBP9.96□□□□□ -0.81
GARNL3-205ENST00000435213 NAP1L5Q96NT1 182 aaPredicted RBP9.96□□□□□ -0.81
GARNL3-205ENST00000435213 TIAM1Q13009 1591 aa9.96□□□□□ -0.81
GARNL3-205ENST00000435213 RSPH4AQ5TD94 716 aa9.96□□□□□ -0.82
GARNL3-205ENST00000435213 RAB3GAP2Q9H2M9 1393 aa9.95□□□□□ -0.82
GARNL3-205ENST00000435213 ARHGAP35Q9NRY4 1499 aa9.95□□□□□ -0.82
GARNL3-205ENST00000435213 CCER2I3L3R5 266 aa9.94□□□□□ -0.82
GARNL3-205ENST00000435213 CFAP43Q8NDM7 1665 aa9.94□□□□□ -0.82
GARNL3-205ENST00000435213 TULP1O00294 542 aaPredicted RBP9.93□□□□□ -0.82
GARNL3-205ENST00000435213 KCNH8Q96L42 1107 aa9.93□□□□□ -0.82
GARNL3-205ENST00000435213 SETD5Q9C0A6 1442 aa9.93□□□□□ -0.82
GARNL3-205ENST00000435213 PAXIP1Q6ZW49 1069 aaPredicted RBP9.93□□□□□ -0.82
GARNL3-205ENST00000435213 KIF27Q86VH2 1401 aa9.93□□□□□ -0.82
GARNL3-205ENST00000435213 PLPPR3Q6T4P5 718 aa9.93□□□□□ -0.82
GARNL3-205ENST00000435213 ITGAEP38570 1179 aa9.91□□□□□ -0.82
GARNL3-205ENST00000435213 USP35Q9P2H5 1018 aa9.91□□□□□ -0.82
GARNL3-205ENST00000435213 WASHC2CQ9Y4E1 1318 aa9.91□□□□□ -0.82
GARNL3-205ENST00000435213 CUX1P39880 1505 aa9.91□□□□□ -0.82
GARNL3-205ENST00000435213 CHMP4AQ9BY43 222 aa9.91□□□□□ -0.82
GARNL3-205ENST00000435213 NAP1L2Q9ULW6 460 aaPredicted RBP9.91□□□□□ -0.82
GARNL3-205ENST00000435213 FAM43AQ8N2R8 423 aa9.9□□□□□ -0.82
GARNL3-205ENST00000435213 PPP1R15AO75807 674 aaPredicted RBP9.9□□□□□ -0.82
GARNL3-205ENST00000435213 KIF21AQ7Z4S6 1674 aa9.9□□□□□ -0.82
GARNL3-205ENST00000435213 WASHC2AQ641Q2 1341 aa9.9□□□□□ -0.83
GARNL3-205ENST00000435213 DHX37Q8IY37 1157 aaKnown RBP9.88□□□□□ -0.83
GARNL3-205ENST00000435213 NEFMP07197 916 aa9.88□□□□□ -0.83
GARNL3-205ENST00000435213 LRRC9Q6ZRR7 1453 aa9.87□□□□□ -0.83
GARNL3-205ENST00000435213 DNMBPQ6XZF7 1577 aa9.87□□□□□ -0.83
GARNL3-205ENST00000435213 DDX10Q13206 875 aaKnown RBP9.87□□□□□ -0.83
GARNL3-205ENST00000435213 NPM2Q86SE8 214 aaKnown RBP9.86□□□□□ -0.83
GARNL3-205ENST00000435213 THOC2Q8NI27 1593 aaKnown RBP9.86□□□□□ -0.83
GARNL3-205ENST00000435213 CADPSQ9ULU8 1353 aa9.86□□□□□ -0.83
GARNL3-205ENST00000435213 HSP90AA1P07900 732 aaKnown RBP9.86□□□□□ -0.83
GARNL3-205ENST00000435213 ANP32CO43423 234 aa9.85□□□□□ -0.83
GARNL3-205ENST00000435213 BRPF3Q9ULD4 1205 aa9.85□□□□□ -0.83
GARNL3-205ENST00000435213 BBXQ8WY36 941 aaPredicted RBP9.85□□□□□ -0.83
GARNL3-205ENST00000435213 ZBTB47Q9UFB7 747 aaPredicted RBP9.84□□□□□ -0.83
GARNL3-205ENST00000435213 IPO4Q8TEX9 1081 aaKnown RBP9.83□□□□□ -0.84
GARNL3-205ENST00000435213 WDR62O43379 1518 aa9.83□□□□□ -0.84
GARNL3-205ENST00000435213 PAK3O75914 559 aaPredicted RBP9.83□□□□□ -0.84
GARNL3-205ENST00000435213 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.83□□□□□ -0.84
GARNL3-205ENST00000435213 FHAD1B1AJZ9 1412 aa9.82□□□□□ -0.84
GARNL3-205ENST00000435213 NESP48681 1621 aa9.82□□□□□ -0.84
GARNL3-205ENST00000435213 ANP32AP39687 249 aaKnown RBP9.82□□□□□ -0.84
GARNL3-205ENST00000435213 CALD1Q05682 793 aaKnown RBP9.82□□□□□ -0.84
GARNL3-205ENST00000435213 PCF11O94913 1555 aaKnown RBP9.82□□□□□ -0.84
GARNL3-205ENST00000435213 PHLDB1Q86UU1 1377 aa9.82□□□□□ -0.84
GARNL3-205ENST00000435213 NCLP19338 710 aaKnown RBP9.81□□□□□ -0.84
GARNL3-205ENST00000435213 CANXP27824 592 aaKnown RBP9.81□□□□□ -0.84
GARNL3-205ENST00000435213 TARBP1Q13395 1621 aaKnown RBP9.81□□□□□ -0.84
GARNL3-205ENST00000435213 ABCA5Q8WWZ7 1642 aa9.81□□□□□ -0.84
GARNL3-205ENST00000435213 CNGB1Q14028 1251 aaPredicted RBP9.8□□□□□ -0.84
GARNL3-205ENST00000435213 SIN3AQ96ST3 1273 aa9.79□□□□□ -0.84
GARNL3-205ENST00000435213 TRIM52Q96A61 297 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms