RNA–Protein interactions for RNA: ENST00000435067.2

LINC01055-201, Transcript of long intergenic non-protein coding RNA 1055, humanhuman

TSL 3 BASIC

Gene LINC01055, Length 1,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01055-201ENST00000435067 CTTNBP2Q8WZ74 1663 aa16.67■□□□□ 0.26
LINC01055-201ENST00000435067 CEP162Q5TB80 1403 aa16.67■□□□□ 0.26
LINC01055-201ENST00000435067 CEP170Q5SW79 1584 aa16.65■□□□□ 0.26
LINC01055-201ENST00000435067 NUP160Q12769 1436 aa16.62■□□□□ 0.25
LINC01055-201ENST00000435067 CLIP1P30622 1438 aa16.61■□□□□ 0.25
LINC01055-201ENST00000435067 KIAA0586Q9BVV6 1533 aa16.6■□□□□ 0.25
LINC01055-201ENST00000435067 IQGAP2Q13576 1575 aa16.59■□□□□ 0.25
LINC01055-201ENST00000435067 P3H3Q8IVL6 736 aa16.53■□□□□ 0.24
LINC01055-201ENST00000435067 ARHGAP35Q9NRY4 1499 aa16.53■□□□□ 0.24
LINC01055-201ENST00000435067 JPH4Q96JJ6 628 aa16.51■□□□□ 0.23
LINC01055-201ENST00000435067 OSCARQ8IYS5 282 aa16.5■□□□□ 0.23
LINC01055-201ENST00000435067 UGGT2Q9NYU1 1516 aa16.49■□□□□ 0.23
LINC01055-201ENST00000435067 ARAP1Q96P48 1450 aa16.48■□□□□ 0.23
LINC01055-201ENST00000435067 EFCAB5A4FU69 1503 aa16.48■□□□□ 0.23
LINC01055-201ENST00000435067 CLASP1Q7Z460 1538 aa16.48■□□□□ 0.23
LINC01055-201ENST00000435067 SAMD9Q5K651 1589 aa16.47■□□□□ 0.23
LINC01055-201ENST00000435067 FHOD3Q2V2M9 1422 aa16.46■□□□□ 0.23
LINC01055-201ENST00000435067 DISP1Q96F81 1524 aa16.45■□□□□ 0.22
LINC01055-201ENST00000435067 PRG4Q92954 1404 aaPredicted RBP16.43■□□□□ 0.22
LINC01055-201ENST00000435067 KIAA0556O60303 1618 aa16.42■□□□□ 0.22
LINC01055-201ENST00000435067 SHROOM2Q13796 1616 aa16.42■□□□□ 0.22
LINC01055-201ENST00000435067 CARMIL2Q6F5E8 1435 aa16.41■□□□□ 0.22
LINC01055-201ENST00000435067 TTBK1Q5TCY1 1321 aaPredicted RBP16.41■□□□□ 0.22
LINC01055-201ENST00000435067 VPS8Q8N3P4 1428 aa16.4■□□□□ 0.22
LINC01055-201ENST00000435067 ERCC6L2Q5T890 1561 aa16.37■□□□□ 0.21
LINC01055-201ENST00000435067 FMN1Q68DA7 1419 aa16.35■□□□□ 0.21
LINC01055-201ENST00000435067 ATP1B4Q9UN42 357 aaPredicted RBP16.32■□□□□ 0.2
LINC01055-201ENST00000435067 PCF11O94913 1555 aaKnown RBP16.3■□□□□ 0.2
LINC01055-201ENST00000435067 PTPRGP23470 1445 aa16.29■□□□□ 0.2
LINC01055-201ENST00000435067 CASKIN1Q8WXD9 1431 aa16.28■□□□□ 0.2
LINC01055-201ENST00000435067 APLP2Q06481 763 aa16.26■□□□□ 0.19
LINC01055-201ENST00000435067 PPARGC1BQ86YN6 1023 aaKnown RBP16.26■□□□□ 0.19
LINC01055-201ENST00000435067 FYCO1Q9BQS8 1478 aa16.26■□□□□ 0.19
LINC01055-201ENST00000435067 PLB1Q6P1J6 1458 aa16.25■□□□□ 0.19
LINC01055-201ENST00000435067 RAPGEF6Q8TEU7 1601 aa16.23■□□□□ 0.19
LINC01055-201ENST00000435067 ARID3CA6NKF2 412 aa16.22■□□□□ 0.19
LINC01055-201ENST00000435067 ARHGEF11O15085 1522 aa16.22■□□□□ 0.19
LINC01055-201ENST00000435067 HECW1Q76N89 1606 aa16.21■□□□□ 0.19
LINC01055-201ENST00000435067 ABCA8O94911 1581 aa16.2■□□□□ 0.18
LINC01055-201ENST00000435067 LRRIQ1Q96JM4 1722 aa16.2■□□□□ 0.18
LINC01055-201ENST00000435067 NUP153P49790 1475 aaKnown RBP16.18■□□□□ 0.18
LINC01055-201ENST00000435067 UACAQ9BZF9 1416 aa16.18■□□□□ 0.18
LINC01055-201ENST00000435067 TIAM1Q13009 1591 aa16.17■□□□□ 0.18
LINC01055-201ENST00000435067 EPRSP07814 1512 aaKnown RBP16.17■□□□□ 0.18
LINC01055-201ENST00000435067 KANK4Q5T7N3 995 aaPredicted RBP16.16■□□□□ 0.18
LINC01055-201ENST00000435067 RIMBP3CA6NJZ7 1639 aa16.16■□□□□ 0.18
LINC01055-201ENST00000435067 RIMBP3BA6NNM3 1639 aa16.16■□□□□ 0.18
LINC01055-201ENST00000435067 RIMBP3Q9UFD9 1639 aa16.16■□□□□ 0.18
LINC01055-201ENST00000435067 CDK13Q14004 1512 aaKnown RBP16.15■□□□□ 0.18
LINC01055-201ENST00000435067 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.15■□□□□ 0.18
LINC01055-201ENST00000435067 HNRNPUL2Q1KMD3 747 aaKnown RBP16.15■□□□□ 0.18
LINC01055-201ENST00000435067 CCDC18Q5T9S5 1454 aa16.15■□□□□ 0.18
LINC01055-201ENST00000435067 CFAP43Q8NDM7 1665 aa16.14■□□□□ 0.17
LINC01055-201ENST00000435067 MAP3K1Q13233 1512 aa16.14■□□□□ 0.17
LINC01055-201ENST00000435067 ABCC2Q92887 1545 aa16.14■□□□□ 0.17
LINC01055-201ENST00000435067 CYB5RLQ6IPT4 315 aa16.11■□□□□ 0.17
LINC01055-201ENST00000435067 UHRF1BP1LA0JNW5 1464 aa16.1■□□□□ 0.17
LINC01055-201ENST00000435067 ATP10BO94823 1461 aa16.1■□□□□ 0.17
LINC01055-201ENST00000435067 LRRC9Q6ZRR7 1453 aa16.1■□□□□ 0.17
LINC01055-201ENST00000435067 ADCY10Q96PN6 1610 aa16.09■□□□□ 0.17
LINC01055-201ENST00000435067 MTUS2Q5JR59 1369 aa16.08■□□□□ 0.16
LINC01055-201ENST00000435067 MAGI3Q5TCQ9 1506 aa16.07■□□□□ 0.16
LINC01055-201ENST00000435067 CDK11AQ9UQ88 783 aaPredicted RBP16.06■□□□□ 0.16
LINC01055-201ENST00000435067 KDM5BQ9UGL1 1544 aa16.04■□□□□ 0.16
LINC01055-201ENST00000435067 ZCCHC11Q5TAX3 1644 aaKnown RBP16.04■□□□□ 0.16
LINC01055-201ENST00000435067 PLEKHD1A6NEE1 506 aa16.02■□□□□ 0.16
LINC01055-201ENST00000435067 EHBP1L1Q8N3D4 1523 aa16.02■□□□□ 0.16
LINC01055-201ENST00000435067 NPM1P06748 294 aaKnown RBP eCLIP16■□□□□ 0.15
LINC01055-201ENST00000435067 TROQ12816 1431 aaPredicted RBP15.99■□□□□ 0.15
LINC01055-201ENST00000435067 SUPT6HQ7KZ85 1726 aaKnown RBP15.97■□□□□ 0.15
LINC01055-201ENST00000435067 DNAJC5Q9H3Z4 198 aa15.97■□□□□ 0.15
LINC01055-201ENST00000435067 NCOA2Q15596 1464 aa15.97■□□□□ 0.15
LINC01055-201ENST00000435067 PHLDB1Q86UU1 1377 aa15.96■□□□□ 0.14
LINC01055-201ENST00000435067 TRIM26Q12899 539 aaPredicted RBP15.95■□□□□ 0.14
LINC01055-201ENST00000435067 KCNH8Q96L42 1107 aa15.94■□□□□ 0.14
LINC01055-201ENST00000435067 KIF14Q15058 1648 aa15.94■□□□□ 0.14
LINC01055-201ENST00000435067 ASXL2Q76L83 1435 aa15.92■□□□□ 0.14
LINC01055-201ENST00000435067 WDR7Q9Y4E6 1490 aa15.91■□□□□ 0.14
LINC01055-201ENST00000435067 PCGF6Q9BYE7 350 aa15.89■□□□□ 0.13
LINC01055-201ENST00000435067 CCNB3Q8WWL7 1395 aa15.89■□□□□ 0.13
LINC01055-201ENST00000435067 MYOM3Q5VTT5 1437 aa15.88■□□□□ 0.13
LINC01055-201ENST00000435067 ABCC10Q5T3U5 1492 aa15.86■□□□□ 0.13
LINC01055-201ENST00000435067 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.86■□□□□ 0.13
LINC01055-201ENST00000435067 RRBP1Q9P2E9 1410 aaKnown RBP15.85■□□□□ 0.13
LINC01055-201ENST00000435067 MAPKBP1O60336 1514 aa15.85■□□□□ 0.13
LINC01055-201ENST00000435067 FGD6Q6ZV73 1430 aa15.85■□□□□ 0.13
LINC01055-201ENST00000435067 TTC37Q6PGP7 1564 aa15.84■□□□□ 0.13
LINC01055-201ENST00000435067 FAM50AQ14320 339 aaKnown RBP15.83■□□□□ 0.13
LINC01055-201ENST00000435067 GPATCH8Q9UKJ3 1502 aaKnown RBP15.83■□□□□ 0.13
LINC01055-201ENST00000435067 CDC42BPAQ5VT25 1732 aa15.82■□□□□ 0.12
LINC01055-201ENST00000435067 CFDP1Q9UEE9 299 aaPredicted RBP15.82■□□□□ 0.12
LINC01055-201ENST00000435067 AEBP2Q6ZN18 517 aaPredicted RBP15.81■□□□□ 0.12
LINC01055-201ENST00000435067 ITSN2Q9NZM3 1697 aa15.81■□□□□ 0.12
LINC01055-201ENST00000435067 MIA2Q96PC5 1412 aa15.8■□□□□ 0.12
LINC01055-201ENST00000435067 ZNF777Q9ULD5 760 aaPredicted RBP15.8■□□□□ 0.12
LINC01055-201ENST00000435067 PTPN23Q9H3S7 1636 aa15.79■□□□□ 0.12
LINC01055-201ENST00000435067 ABCA9Q8IUA7 1624 aa15.79■□□□□ 0.12
LINC01055-201ENST00000435067 MYO5CQ9NQX4 1742 aa15.78■□□□□ 0.12
LINC01055-201ENST00000435067 ZNF644Q9H582 1327 aaPredicted RBP15.78■□□□□ 0.12
LINC01055-201ENST00000435067 PREX2Q70Z35 1606 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms