RNA–Protein interactions for RNA: ENST00000435024.1

LINC00460-201, long intergenic non-protein coding RNA 460, humanhuman

TSL 1 (best) BASIC

Gene LINC00460, Length 631 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00460-201ENST00000435024 PRXQ9BXM0 1461 aa12.72□□□□□ -0.37
LINC00460-201ENST00000435024 KIAA0586Q9BVV6 1533 aa12.72□□□□□ -0.37
LINC00460-201ENST00000435024 JPH4Q96JJ6 628 aa12.7□□□□□ -0.38
LINC00460-201ENST00000435024 ARHGEF11O15085 1522 aa12.67□□□□□ -0.38
LINC00460-201ENST00000435024 KIF21BO75037 1637 aa12.67□□□□□ -0.38
LINC00460-201ENST00000435024 UBTFP17480 764 aaKnown RBP12.67□□□□□ -0.38
LINC00460-201ENST00000435024 IQGAP2Q13576 1575 aa12.67□□□□□ -0.38
LINC00460-201ENST00000435024 CARMIL2Q6F5E8 1435 aa12.66□□□□□ -0.38
LINC00460-201ENST00000435024 CTTNBP2Q8WZ74 1663 aa12.66□□□□□ -0.38
LINC00460-201ENST00000435024 GOLGA3Q08378 1498 aa12.65□□□□□ -0.38
LINC00460-201ENST00000435024 RIMBP3CA6NJZ7 1639 aa12.65□□□□□ -0.38
LINC00460-201ENST00000435024 RIMBP3BA6NNM3 1639 aa12.65□□□□□ -0.38
LINC00460-201ENST00000435024 RIMBP3Q9UFD9 1639 aa12.65□□□□□ -0.38
LINC00460-201ENST00000435024 PRG4Q92954 1404 aaPredicted RBP12.64□□□□□ -0.39
LINC00460-201ENST00000435024 SHROOM2Q13796 1616 aa12.64□□□□□ -0.39
LINC00460-201ENST00000435024 EHMT2Q96KQ7 1210 aa12.62□□□□□ -0.39
LINC00460-201ENST00000435024 CYB5RLQ6IPT4 315 aa12.61□□□□□ -0.39
LINC00460-201ENST00000435024 UGGT2Q9NYU1 1516 aa12.57□□□□□ -0.4
LINC00460-201ENST00000435024 RANGAP1P46060 587 aaPredicted RBP12.56□□□□□ -0.4
LINC00460-201ENST00000435024 TNIKQ9UKE5 1360 aa12.56□□□□□ -0.4
LINC00460-201ENST00000435024 ARAP1Q96P48 1450 aa12.55□□□□□ -0.4
LINC00460-201ENST00000435024 TTBK1Q5TCY1 1321 aaPredicted RBP12.55□□□□□ -0.4
LINC00460-201ENST00000435024 PTPRGP23470 1445 aa12.54□□□□□ -0.4
LINC00460-201ENST00000435024 ERCC6L2Q5T890 1561 aa12.53□□□□□ -0.4
LINC00460-201ENST00000435024 NPM1P06748 294 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC00460-201ENST00000435024 KIAA0556O60303 1618 aa12.52□□□□□ -0.4
LINC00460-201ENST00000435024 DISP1Q96F81 1524 aa12.51□□□□□ -0.41
LINC00460-201ENST00000435024 EFCAB5A4FU69 1503 aa12.5□□□□□ -0.41
LINC00460-201ENST00000435024 P3H3Q8IVL6 736 aa12.49□□□□□ -0.41
LINC00460-201ENST00000435024 SAMD9Q5K651 1589 aa12.46□□□□□ -0.42
LINC00460-201ENST00000435024 PHF23Q9BUL5 403 aaPredicted RBP12.44□□□□□ -0.42
LINC00460-201ENST00000435024 UACAQ9BZF9 1416 aa12.44□□□□□ -0.42
LINC00460-201ENST00000435024 CLIP1P30622 1438 aa12.43□□□□□ -0.42
LINC00460-201ENST00000435024 LOC105371045A0A1W2PR82 267 aa12.42□□□□□ -0.42
LINC00460-201ENST00000435024 FMN1Q68DA7 1419 aa12.42□□□□□ -0.42
LINC00460-201ENST00000435024 FHOD3Q2V2M9 1422 aa12.41□□□□□ -0.42
LINC00460-201ENST00000435024 UHRF1BP1LA0JNW5 1464 aa12.4□□□□□ -0.42
LINC00460-201ENST00000435024 ABCC2Q92887 1545 aa12.4□□□□□ -0.42
LINC00460-201ENST00000435024 ARHGAP35Q9NRY4 1499 aa12.39□□□□□ -0.43
LINC00460-201ENST00000435024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.38□□□□□ -0.43
LINC00460-201ENST00000435024 TRHP20396 242 aaPredicted RBP12.38□□□□□ -0.43
LINC00460-201ENST00000435024 HNRNPUL2Q1KMD3 747 aaKnown RBP12.38□□□□□ -0.43
LINC00460-201ENST00000435024 ATP1B4Q9UN42 357 aaPredicted RBP12.38□□□□□ -0.43
LINC00460-201ENST00000435024 CEP162Q5TB80 1403 aa12.37□□□□□ -0.43
LINC00460-201ENST00000435024 ADCY10Q96PN6 1610 aa12.37□□□□□ -0.43
LINC00460-201ENST00000435024 PLB1Q6P1J6 1458 aa12.37□□□□□ -0.43
LINC00460-201ENST00000435024 RAPGEF6Q8TEU7 1601 aa12.36□□□□□ -0.43
LINC00460-201ENST00000435024 ABCA8O94911 1581 aa12.35□□□□□ -0.43
LINC00460-201ENST00000435024 KDM5BQ9UGL1 1544 aa12.33□□□□□ -0.44
LINC00460-201ENST00000435024 MAPKBP1O60336 1514 aa12.32□□□□□ -0.44
LINC00460-201ENST00000435024 CDK11AQ9UQ88 783 aaPredicted RBP12.32□□□□□ -0.44
LINC00460-201ENST00000435024 HECW1Q76N89 1606 aa12.31□□□□□ -0.44
LINC00460-201ENST00000435024 ARID3CA6NKF2 412 aa12.31□□□□□ -0.44
LINC00460-201ENST00000435024 ZCCHC11Q5TAX3 1644 aaKnown RBP12.3□□□□□ -0.44
LINC00460-201ENST00000435024 PLEKHD1A6NEE1 506 aa12.29□□□□□ -0.44
LINC00460-201ENST00000435024 ASXL2Q76L83 1435 aa12.28□□□□□ -0.44
LINC00460-201ENST00000435024 CASKIN1Q8WXD9 1431 aa12.28□□□□□ -0.44
LINC00460-201ENST00000435024 NUP153P49790 1475 aaKnown RBP12.27□□□□□ -0.44
LINC00460-201ENST00000435024 FAM69CQ0P6D2 419 aa12.27□□□□□ -0.45
LINC00460-201ENST00000435024 ATP10BO94823 1461 aa12.27□□□□□ -0.45
LINC00460-201ENST00000435024 CCDC18Q5T9S5 1454 aa12.27□□□□□ -0.45
LINC00460-201ENST00000435024 FYCO1Q9BQS8 1478 aa12.27□□□□□ -0.45
LINC00460-201ENST00000435024 APLP2Q06481 763 aa12.26□□□□□ -0.45
LINC00460-201ENST00000435024 WDR7Q9Y4E6 1490 aa12.26□□□□□ -0.45
LINC00460-201ENST00000435024 KCNH8Q96L42 1107 aa12.25□□□□□ -0.45
LINC00460-201ENST00000435024 ABCC10Q5T3U5 1492 aa12.25□□□□□ -0.45
LINC00460-201ENST00000435024 EPRSP07814 1512 aaKnown RBP12.24□□□□□ -0.45
LINC00460-201ENST00000435024 PCF11O94913 1555 aaKnown RBP12.23□□□□□ -0.45
LINC00460-201ENST00000435024 VPS8Q8N3P4 1428 aa12.23□□□□□ -0.45
LINC00460-201ENST00000435024 FOXD1Q16676 465 aa12.2□□□□□ -0.46
LINC00460-201ENST00000435024 DIP2BQ9P265 1576 aa12.2□□□□□ -0.46
LINC00460-201ENST00000435024 CDK13Q14004 1512 aaKnown RBP12.2□□□□□ -0.46
LINC00460-201ENST00000435024 GLI2P10070 1586 aa12.19□□□□□ -0.46
LINC00460-201ENST00000435024 MTUS2Q5JR59 1369 aa12.18□□□□□ -0.46
LINC00460-201ENST00000435024 KIF13AQ9H1H9 1805 aa12.17□□□□□ -0.46
LINC00460-201ENST00000435024 TROQ12816 1431 aaPredicted RBP12.16□□□□□ -0.46
LINC00460-201ENST00000435024 TEX14Q8IWB6 1497 aa12.15□□□□□ -0.46
LINC00460-201ENST00000435024 CD109Q6YHK3 1445 aa12.15□□□□□ -0.46
LINC00460-201ENST00000435024 CFAP43Q8NDM7 1665 aa12.15□□□□□ -0.46
LINC00460-201ENST00000435024 KIF14Q15058 1648 aa12.15□□□□□ -0.47
LINC00460-201ENST00000435024 TSPOAP1O95153 1857 aa12.12□□□□□ -0.47
LINC00460-201ENST00000435024 LRRIQ1Q96JM4 1722 aa12.12□□□□□ -0.47
LINC00460-201ENST00000435024 ABCA9Q8IUA7 1624 aa12.11□□□□□ -0.47
LINC00460-201ENST00000435024 MAP3K4Q9Y6R4 1608 aa12.11□□□□□ -0.47
LINC00460-201ENST00000435024 MAP3K1Q13233 1512 aa12.11□□□□□ -0.47
LINC00460-201ENST00000435024 EHBP1L1Q8N3D4 1523 aa12.11□□□□□ -0.47
LINC00460-201ENST00000435024 TIAM1Q13009 1591 aa12.1□□□□□ -0.47
LINC00460-201ENST00000435024 PHLDB1Q86UU1 1377 aa12.09□□□□□ -0.47
LINC00460-201ENST00000435024 MAGI3Q5TCQ9 1506 aa12.09□□□□□ -0.47
LINC00460-201ENST00000435024 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.08□□□□□ -0.48
LINC00460-201ENST00000435024 MSH5O43196 834 aa12.07□□□□□ -0.48
LINC00460-201ENST00000435024 EFCAB2Q5VUJ9 269 aa12.07□□□□□ -0.48
LINC00460-201ENST00000435024 CFAP74Q9C0B2 1584 aa12.07□□□□□ -0.48
LINC00460-201ENST00000435024 CCNB3Q8WWL7 1395 aa12.06□□□□□ -0.48
LINC00460-201ENST00000435024 MYO5CQ9NQX4 1742 aa12.06□□□□□ -0.48
LINC00460-201ENST00000435024 LRRC9Q6ZRR7 1453 aa12.06□□□□□ -0.48
LINC00460-201ENST00000435024 SUPT6HQ7KZ85 1726 aaKnown RBP12.06□□□□□ -0.48
LINC00460-201ENST00000435024 PLCH2O75038 1416 aa12.05□□□□□ -0.48
LINC00460-201ENST00000435024 NEO1Q92859 1461 aa12.05□□□□□ -0.48
LINC00460-201ENST00000435024 TTC37Q6PGP7 1564 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms