RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 JPH4Q96JJ6 628 aa39.15■■■■□ 3.86
HMG20B-205ENST00000435022 CUL7Q14999 1698 aa39.12■■■■□ 3.85
HMG20B-205ENST00000435022 KIAA0586Q9BVV6 1533 aa39■■■■□ 3.83
HMG20B-205ENST00000435022 CARMIL1Q5VZK9 1371 aa38.89■■■■□ 3.82
HMG20B-205ENST00000435022 KIF13AQ9H1H9 1805 aa38.89■■■■□ 3.82
HMG20B-205ENST00000435022 ADCY10Q96PN6 1610 aa38.85■■■■□ 3.81
HMG20B-205ENST00000435022 MAPKBP1O60336 1514 aa38.72■■■■□ 3.79
HMG20B-205ENST00000435022 IQGAP2Q13576 1575 aa38.68■■■■□ 3.78
HMG20B-205ENST00000435022 ABCC10Q5T3U5 1492 aa38.66■■■■□ 3.78
HMG20B-205ENST00000435022 DIP2BQ9P265 1576 aa38.62■■■■□ 3.77
HMG20B-205ENST00000435022 PTPRGP23470 1445 aa38.57■■■■□ 3.77
HMG20B-205ENST00000435022 RAPGEF2Q9Y4G8 1499 aa38.56■■■■□ 3.76
HMG20B-205ENST00000435022 DISP1Q96F81 1524 aa38.54■■■■□ 3.76
HMG20B-205ENST00000435022 NPM1P06748 294 aaKnown RBP eCLIP38.54■■■■□ 3.76
HMG20B-205ENST00000435022 TNIKQ9UKE5 1360 aa38.53■■■■□ 3.76
HMG20B-205ENST00000435022 FAM69CQ0P6D2 419 aa38.52■■■■□ 3.76
HMG20B-205ENST00000435022 CARMIL2Q6F5E8 1435 aa38.51■■■■□ 3.76
HMG20B-205ENST00000435022 TTBK1Q5TCY1 1321 aaPredicted RBP38.46■■■■□ 3.75
HMG20B-205ENST00000435022 UGGT2Q9NYU1 1516 aa38.46■■■■□ 3.75
HMG20B-205ENST00000435022 ABCC2Q92887 1545 aa38.42■■■■□ 3.74
HMG20B-205ENST00000435022 UHRF1BP1LA0JNW5 1464 aa38.37■■■■□ 3.73
HMG20B-205ENST00000435022 KIAA0556O60303 1618 aa38.37■■■■□ 3.73
HMG20B-205ENST00000435022 UACAQ9BZF9 1416 aa38.32■■■■□ 3.73
HMG20B-205ENST00000435022 CTTNBP2Q8WZ74 1663 aa38.32■■■■□ 3.72
HMG20B-205ENST00000435022 TSPOAP1O95153 1857 aa38.29■■■■□ 3.72
HMG20B-205ENST00000435022 ASXL2Q76L83 1435 aa38.28■■■■□ 3.72
HMG20B-205ENST00000435022 PRXQ9BXM0 1461 aa38.28■■■■□ 3.72
HMG20B-205ENST00000435022 KDM5BQ9UGL1 1544 aa38.22■■■■□ 3.71
HMG20B-205ENST00000435022 AEBP2Q6ZN18 517 aaPredicted RBP38.19■■■■□ 3.7
HMG20B-205ENST00000435022 PLB1Q6P1J6 1458 aa38.19■■■■□ 3.7
HMG20B-205ENST00000435022 KDM6BO15054 1643 aa38.19■■■■□ 3.7
HMG20B-205ENST00000435022 PPRC1Q5VV67 1664 aaKnown RBP38.18■■■■□ 3.7
HMG20B-205ENST00000435022 GLI2P10070 1586 aa38.18■■■■□ 3.7
HMG20B-205ENST00000435022 ZCCHC11Q5TAX3 1644 aaKnown RBP38.16■■■■□ 3.7
HMG20B-205ENST00000435022 EPRSP07814 1512 aaKnown RBP38.07■■■■□ 3.68
HMG20B-205ENST00000435022 GOLGA3Q08378 1498 aa38.03■■■■□ 3.68
HMG20B-205ENST00000435022 ABCA8O94911 1581 aa38.02■■■■□ 3.68
HMG20B-205ENST00000435022 MAP3K4Q9Y6R4 1608 aa38.01■■■■□ 3.68
HMG20B-205ENST00000435022 WDR7Q9Y4E6 1490 aa37.91■■■■□ 3.66
HMG20B-205ENST00000435022 COL17A1Q9UMD9 1497 aaPredicted RBP37.88■■■■□ 3.65
HMG20B-205ENST00000435022 CSRNP3Q8WYN3 585 aa37.87■■■■□ 3.65
HMG20B-205ENST00000435022 SAMD9Q5K651 1589 aa37.81■■■■□ 3.64
HMG20B-205ENST00000435022 KDM4FA0A1W2PPD8 638 aa37.78■■■■□ 3.64
HMG20B-205ENST00000435022 P3H3Q8IVL6 736 aa37.75■■■■□ 3.63
HMG20B-205ENST00000435022 TEX14Q8IWB6 1497 aa37.75■■■■□ 3.63
HMG20B-205ENST00000435022 EEA1Q15075 1411 aa37.74■■■■□ 3.63
HMG20B-205ENST00000435022 CFAP43Q8NDM7 1665 aa37.69■■■■□ 3.62
HMG20B-205ENST00000435022 ATP10BO94823 1461 aa37.66■■■■□ 3.62
HMG20B-205ENST00000435022 MAGI3Q5TCQ9 1506 aa37.64■■■■□ 3.62
HMG20B-205ENST00000435022 CD109Q6YHK3 1445 aa37.62■■■■□ 3.61
HMG20B-205ENST00000435022 KCNH8Q96L42 1107 aa37.62■■■■□ 3.61
HMG20B-205ENST00000435022 ARID3CA6NKF2 412 aa37.61■■■■□ 3.61
HMG20B-205ENST00000435022 RAPGEF6Q8TEU7 1601 aa37.59■■■■□ 3.61
HMG20B-205ENST00000435022 FAM9AQ8IZU1 332 aaPredicted RBP37.57■■■■□ 3.6
HMG20B-205ENST00000435022 KIF21BO75037 1637 aa37.55■■■■□ 3.6
HMG20B-205ENST00000435022 FHOD3Q2V2M9 1422 aa37.52■■■■□ 3.6
HMG20B-205ENST00000435022 ADGRL1O94910 1474 aa37.52■■■■□ 3.6
HMG20B-205ENST00000435022 NUP153P49790 1475 aaKnown RBP37.49■■■■□ 3.59
HMG20B-205ENST00000435022 ABCA9Q8IUA7 1624 aa37.47■■■■□ 3.59
HMG20B-205ENST00000435022 RANGAP1P46060 587 aaPredicted RBP37.46■■■■□ 3.59
HMG20B-205ENST00000435022 EFCAB5A4FU69 1503 aa37.36■■■■□ 3.57
HMG20B-205ENST00000435022 ARAP3Q8WWN8 1544 aa37.35■■■■□ 3.57
HMG20B-205ENST00000435022 CHIC1Q5VXU3 224 aa37.34■■■■□ 3.57
HMG20B-205ENST00000435022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.23■■■■□ 3.55
HMG20B-205ENST00000435022 HNRNPUL2Q1KMD3 747 aaKnown RBP37.23■■■■□ 3.55
HMG20B-205ENST00000435022 EHMT2Q96KQ7 1210 aa37.2■■■■□ 3.55
HMG20B-205ENST00000435022 NEO1Q92859 1461 aa37.19■■■■□ 3.54
HMG20B-205ENST00000435022 FRMPD1Q5SYB0 1578 aa37.18■■■■□ 3.54
HMG20B-205ENST00000435022 CDK13Q14004 1512 aaKnown RBP37.15■■■■□ 3.54
HMG20B-205ENST00000435022 PHLDB1Q86UU1 1377 aa37.15■■■■□ 3.54
HMG20B-205ENST00000435022 ARHGAP35Q9NRY4 1499 aa37.13■■■■□ 3.53
HMG20B-205ENST00000435022 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.11■■■■□ 3.536e-8■□□□□ 8.9
HMG20B-205ENST00000435022 TTC37Q6PGP7 1564 aa37.11■■■■□ 3.53
HMG20B-205ENST00000435022 RAPGEF3O95398 923 aa37.09■■■■□ 3.53
HMG20B-205ENST00000435022 UBTFP17480 764 aaKnown RBP37.08■■■■□ 3.53
HMG20B-205ENST00000435022 PLEKHD1A6NEE1 506 aa37.07■■■■□ 3.52
HMG20B-205ENST00000435022 HECW1Q76N89 1606 aa36.99■■■■□ 3.51
HMG20B-205ENST00000435022 RICTORQ6R327 1708 aa36.99■■■■□ 3.51
HMG20B-205ENST00000435022 HECW2Q9P2P5 1572 aa36.98■■■■□ 3.51
HMG20B-205ENST00000435022 FMN1Q68DA7 1419 aa36.97■■■■□ 3.51
HMG20B-205ENST00000435022 FANCAO15360 1455 aa36.96■■■■□ 3.51
HMG20B-205ENST00000435022 AKNAQ7Z591 1439 aa36.95■■■■□ 3.51
HMG20B-205ENST00000435022 ADAMTSL3P82987 1691 aa36.93■■■■□ 3.5
HMG20B-205ENST00000435022 CFAP74Q9C0B2 1584 aa36.93■■■■□ 3.5
HMG20B-205ENST00000435022 LRRIQ1Q96JM4 1722 aa36.92■■■■□ 3.5
HMG20B-205ENST00000435022 DENND4BO75064 1496 aaPredicted RBP36.91■■■■□ 3.5
HMG20B-205ENST00000435022 ARHGEF40Q8TER5 1519 aa36.9■■■■□ 3.5
HMG20B-205ENST00000435022 BCORL1Q5H9F3 1711 aa36.85■■■■□ 3.49
HMG20B-205ENST00000435022 KIF14Q15058 1648 aa36.84■■■■□ 3.49
HMG20B-205ENST00000435022 ZMYM4Q5VZL5 1548 aa36.83■■■■□ 3.49
HMG20B-205ENST00000435022 PLCH2O75038 1416 aa36.82■■■■□ 3.48
HMG20B-205ENST00000435022 ATP1B4Q9UN42 357 aaPredicted RBP36.8■■■■□ 3.48
HMG20B-205ENST00000435022 SIGLEC1Q9BZZ2 1709 aa36.79■■■■□ 3.48
HMG20B-205ENST00000435022 PTPRMP28827 1452 aa36.77■■■■□ 3.48
HMG20B-205ENST00000435022 MADDQ8WXG6 1647 aa36.77■■■■□ 3.48
HMG20B-205ENST00000435022 MYO5CQ9NQX4 1742 aa36.76■■■■□ 3.47
HMG20B-205ENST00000435022 YEATS2Q9ULM3 1422 aa36.75■■■■□ 3.47
HMG20B-205ENST00000435022 PCF11O94913 1555 aaKnown RBP36.74■■■■□ 3.47
HMG20B-205ENST00000435022 TROQ12816 1431 aaPredicted RBP36.74■■■■□ 3.47
HMG20B-205ENST00000435022 POGZQ7Z3K3 1410 aa36.71■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms