RNA–Protein interactions for RNA: ENST00000434600.6

LAMP2-203, Transcript of lysosomal associated membrane protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMP2, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP2-203ENST00000434600 RANGAP1P46060 587 aaPredicted RBP21.94■■□□□ 1.1
LAMP2-203ENST00000434600 TNIKQ9UKE5 1360 aa21.94■■□□□ 1.1
LAMP2-203ENST00000434600 SYNJ2O15056 1496 aa21.93■■□□□ 1.1
LAMP2-203ENST00000434600 GRIN2AQ12879 1464 aa21.9■■□□□ 1.1
LAMP2-203ENST00000434600 CEP162Q5TB80 1403 aa21.84■■□□□ 1.09
LAMP2-203ENST00000434600 CHD1O14646 1710 aa21.84■■□□□ 1.09
LAMP2-203ENST00000434600 CEP170Q5SW79 1584 aa21.8■■□□□ 1.08
LAMP2-203ENST00000434600 CTTNBP2Q8WZ74 1663 aa21.8■■□□□ 1.08
LAMP2-203ENST00000434600 CLIP1P30622 1438 aa21.75■■□□□ 1.07
LAMP2-203ENST00000434600 NUP160Q12769 1436 aa21.74■■□□□ 1.07
LAMP2-203ENST00000434600 KIAA0586Q9BVV6 1533 aa21.71■■□□□ 1.07
LAMP2-203ENST00000434600 IQGAP2Q13576 1575 aa21.7■■□□□ 1.06
LAMP2-203ENST00000434600 P3H3Q8IVL6 736 aa21.68■■□□□ 1.06
LAMP2-203ENST00000434600 ARHGAP35Q9NRY4 1499 aa21.67■■□□□ 1.06
LAMP2-203ENST00000434600 ARAP1Q96P48 1450 aa21.61■■□□□ 1.05
LAMP2-203ENST00000434600 JPH4Q96JJ6 628 aa21.6■■□□□ 1.05
LAMP2-203ENST00000434600 FHOD3Q2V2M9 1422 aa21.58■■□□□ 1.05
LAMP2-203ENST00000434600 UGGT2Q9NYU1 1516 aa21.57■■□□□ 1.04
LAMP2-203ENST00000434600 SAMD9Q5K651 1589 aa21.56■■□□□ 1.04
LAMP2-203ENST00000434600 OSCARQ8IYS5 282 aa21.56■■□□□ 1.04
LAMP2-203ENST00000434600 CLASP1Q7Z460 1538 aa21.56■■□□□ 1.04
LAMP2-203ENST00000434600 EFCAB5A4FU69 1503 aa21.55■■□□□ 1.04
LAMP2-203ENST00000434600 DISP1Q96F81 1524 aa21.54■■□□□ 1.04
LAMP2-203ENST00000434600 TTBK1Q5TCY1 1321 aaPredicted RBP21.53■■□□□ 1.04
LAMP2-203ENST00000434600 PRG4Q92954 1404 aaPredicted RBP21.5■■□□□ 1.03
LAMP2-203ENST00000434600 KIAA0556O60303 1618 aa21.5■■□□□ 1.03
LAMP2-203ENST00000434600 VPS8Q8N3P4 1428 aa21.48■■□□□ 1.03
LAMP2-203ENST00000434600 SHROOM2Q13796 1616 aa21.48■■□□□ 1.03
LAMP2-203ENST00000434600 ERCC6L2Q5T890 1561 aa21.47■■□□□ 1.03
LAMP2-203ENST00000434600 CARMIL2Q6F5E8 1435 aa21.44■■□□□ 1.02
LAMP2-203ENST00000434600 ATP1B4Q9UN42 357 aaPredicted RBP21.39■■□□□ 1.01
LAMP2-203ENST00000434600 FMN1Q68DA7 1419 aa21.37■■□□□ 1.01
LAMP2-203ENST00000434600 PCF11O94913 1555 aaKnown RBP21.36■■□□□ 1.01
LAMP2-203ENST00000434600 CCER1Q8TC90 406 aaPredicted RBP21.32■■□□□ 1
LAMP2-203ENST00000434600 PTPRGP23470 1445 aa21.31■■□□□ 1
LAMP2-203ENST00000434600 PLB1Q6P1J6 1458 aa21.3■■□□□ 1
LAMP2-203ENST00000434600 ARID3CA6NKF2 412 aa21.3■■□□□ 1
LAMP2-203ENST00000434600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.3■■□□□ 1
LAMP2-203ENST00000434600 CASKIN1Q8WXD9 1431 aa21.3■■□□□ 1
LAMP2-203ENST00000434600 FYCO1Q9BQS8 1478 aa21.27■■□□□ 1
LAMP2-203ENST00000434600 APLP2Q06481 763 aa21.25■□□□□ 0.99
LAMP2-203ENST00000434600 RAPGEF6Q8TEU7 1601 aa21.23■□□□□ 0.99
LAMP2-203ENST00000434600 LRRIQ1Q96JM4 1722 aa21.23■□□□□ 0.99
LAMP2-203ENST00000434600 ARHGEF11O15085 1522 aa21.22■□□□□ 0.99
LAMP2-203ENST00000434600 KANK4Q5T7N3 995 aaPredicted RBP21.21■□□□□ 0.99
LAMP2-203ENST00000434600 NUP153P49790 1475 aaKnown RBP21.2■□□□□ 0.98
LAMP2-203ENST00000434600 ABCA8O94911 1581 aa21.2■□□□□ 0.98
LAMP2-203ENST00000434600 HECW1Q76N89 1606 aa21.19■□□□□ 0.98
LAMP2-203ENST00000434600 CDK13Q14004 1512 aaKnown RBP21.18■□□□□ 0.98
LAMP2-203ENST00000434600 TIAM1Q13009 1591 aa21.17■□□□□ 0.98
LAMP2-203ENST00000434600 UACAQ9BZF9 1416 aa21.17■□□□□ 0.98
LAMP2-203ENST00000434600 EPRSP07814 1512 aaKnown RBP21.17■□□□□ 0.98
LAMP2-203ENST00000434600 RIMBP3CA6NJZ7 1639 aa21.15■□□□□ 0.98
LAMP2-203ENST00000434600 RIMBP3BA6NNM3 1639 aa21.15■□□□□ 0.98
LAMP2-203ENST00000434600 RIMBP3Q9UFD9 1639 aa21.15■□□□□ 0.98
LAMP2-203ENST00000434600 HNRNPUL2Q1KMD3 747 aaKnown RBP21.14■□□□□ 0.97
LAMP2-203ENST00000434600 CFAP43Q8NDM7 1665 aa21.13■□□□□ 0.97
LAMP2-203ENST00000434600 ABCC2Q92887 1545 aa21.1■□□□□ 0.97
LAMP2-203ENST00000434600 CCDC18Q5T9S5 1454 aa21.1■□□□□ 0.97
LAMP2-203ENST00000434600 MAP3K1Q13233 1512 aa21.09■□□□□ 0.97
LAMP2-203ENST00000434600 LRRC9Q6ZRR7 1453 aa21.09■□□□□ 0.97
LAMP2-203ENST00000434600 CYB5RLQ6IPT4 315 aa21.08■□□□□ 0.97
LAMP2-203ENST00000434600 ATP10BO94823 1461 aa21.08■□□□□ 0.97
LAMP2-203ENST00000434600 ADCY10Q96PN6 1610 aa21.07■□□□□ 0.96
LAMP2-203ENST00000434600 MAGI3Q5TCQ9 1506 aa21.07■□□□□ 0.96
LAMP2-203ENST00000434600 MTUS2Q5JR59 1369 aa21.04■□□□□ 0.96
LAMP2-203ENST00000434600 UHRF1BP1LA0JNW5 1464 aa21.04■□□□□ 0.96
LAMP2-203ENST00000434600 ZCCHC11Q5TAX3 1644 aaKnown RBP20.99■□□□□ 0.95
LAMP2-203ENST00000434600 KDM5BQ9UGL1 1544 aa20.98■□□□□ 0.95
LAMP2-203ENST00000434600 CDK11AQ9UQ88 783 aaPredicted RBP20.97■□□□□ 0.95
LAMP2-203ENST00000434600 EHBP1L1Q8N3D4 1523 aa20.97■□□□□ 0.95
LAMP2-203ENST00000434600 PLEKHD1A6NEE1 506 aa20.95■□□□□ 0.94
LAMP2-203ENST00000434600 TROQ12816 1431 aaPredicted RBP20.92■□□□□ 0.94
LAMP2-203ENST00000434600 DIEXFQ68CQ4 756 aaKnown RBP20.92■□□□□ 0.94
LAMP2-203ENST00000434600 PHLDB1Q86UU1 1377 aa20.92■□□□□ 0.94
LAMP2-203ENST00000434600 NCOA2Q15596 1464 aa20.91■□□□□ 0.94
LAMP2-203ENST00000434600 KIF14Q15058 1648 aa20.89■□□□□ 0.94
LAMP2-203ENST00000434600 SUPT6HQ7KZ85 1726 aaKnown RBP20.89■□□□□ 0.93
LAMP2-203ENST00000434600 NPM1P06748 294 aaKnown RBP eCLIP20.89■□□□□ 0.93
LAMP2-203ENST00000434600 KCNH8Q96L42 1107 aa20.88■□□□□ 0.93
LAMP2-203ENST00000434600 SCAF1Q9H7N4 1312 aaKnown RBP20.87■□□□□ 0.93
LAMP2-203ENST00000434600 DNAJC5Q9H3Z4 198 aa20.87■□□□□ 0.93
LAMP2-203ENST00000434600 ASXL2Q76L83 1435 aa20.84■□□□□ 0.93
LAMP2-203ENST00000434600 ZNF316A6NFI3 1004 aaPredicted RBP20.82■□□□□ 0.92
LAMP2-203ENST00000434600 WDR7Q9Y4E6 1490 aa20.82■□□□□ 0.92
LAMP2-203ENST00000434600 MYOM3Q5VTT5 1437 aa20.78■□□□□ 0.92
LAMP2-203ENST00000434600 CCNB3Q8WWL7 1395 aa20.78■□□□□ 0.92
LAMP2-203ENST00000434600 ABCC10Q5T3U5 1492 aa20.77■□□□□ 0.92
LAMP2-203ENST00000434600 ACIN1Q9UKV3 1341 aaKnown RBP20.77■□□□□ 0.92
LAMP2-203ENST00000434600 TTC37Q6PGP7 1564 aa20.76■□□□□ 0.91
LAMP2-203ENST00000434600 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.76■□□□□ 0.911e-11■■■■□ 19.7
LAMP2-203ENST00000434600 RRBP1Q9P2E9 1410 aaKnown RBP20.76■□□□□ 0.91
LAMP2-203ENST00000434600 FGD6Q6ZV73 1430 aa20.75■□□□□ 0.91
LAMP2-203ENST00000434600 GPATCH8Q9UKJ3 1502 aaKnown RBP20.74■□□□□ 0.91
LAMP2-203ENST00000434600 FAM50AQ14320 339 aaKnown RBP20.74■□□□□ 0.91
LAMP2-203ENST00000434600 MAPKBP1O60336 1514 aa20.72■□□□□ 0.91
LAMP2-203ENST00000434600 CENPBP07199 599 aaPredicted RBP20.71■□□□□ 0.91
LAMP2-203ENST00000434600 CDC42BPAQ5VT25 1732 aa20.71■□□□□ 0.91
LAMP2-203ENST00000434600 ZNF644Q9H582 1327 aaPredicted RBP20.7■□□□□ 0.9
LAMP2-203ENST00000434600 ITGAEP38570 1179 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms