RNA–Protein interactions for RNA: ENST00000433496.5

RFC4-207, Transcript of replication factor C subunit 4, humanhuman

TSL 5 BASIC

Gene RFC4, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-207ENST00000433496 ERCC6L2Q5T890 1561 aa16.66■□□□□ 0.26
RFC4-207ENST00000433496 PRG4Q92954 1404 aaPredicted RBP16.6■□□□□ 0.25
RFC4-207ENST00000433496 IGF1RP08069 1367 aa16.58■□□□□ 0.24
RFC4-207ENST00000433496 JPH4Q96JJ6 628 aa16.55■□□□□ 0.24
RFC4-207ENST00000433496 KIAA0586Q9BVV6 1533 aa16.54■□□□□ 0.24
RFC4-207ENST00000433496 CARMIL1Q5VZK9 1371 aa16.52■□□□□ 0.24
RFC4-207ENST00000433496 IQGAP2Q13576 1575 aa16.47■□□□□ 0.23
RFC4-207ENST00000433496 RAPGEF2Q9Y4G8 1499 aa16.43■□□□□ 0.22
RFC4-207ENST00000433496 NPM1P06748 294 aaKnown RBP eCLIP16.42■□□□□ 0.22
RFC4-207ENST00000433496 CARMIL2Q6F5E8 1435 aa16.42■□□□□ 0.22
RFC4-207ENST00000433496 ADCY10Q96PN6 1610 aa16.41■□□□□ 0.22
RFC4-207ENST00000433496 KIF13AQ9H1H9 1805 aa16.41■□□□□ 0.22
RFC4-207ENST00000433496 CTTNBP2Q8WZ74 1663 aa16.4■□□□□ 0.22
RFC4-207ENST00000433496 MAPKBP1O60336 1514 aa16.36■□□□□ 0.21
RFC4-207ENST00000433496 PTPRGP23470 1445 aa16.36■□□□□ 0.21
RFC4-207ENST00000433496 TTBK1Q5TCY1 1321 aaPredicted RBP16.35■□□□□ 0.21
RFC4-207ENST00000433496 TNIKQ9UKE5 1360 aa16.35■□□□□ 0.21
RFC4-207ENST00000433496 UGGT2Q9NYU1 1516 aa16.32■□□□□ 0.2
RFC4-207ENST00000433496 KIAA0556O60303 1618 aa16.3■□□□□ 0.2
RFC4-207ENST00000433496 DIP2BQ9P265 1576 aa16.3■□□□□ 0.2
RFC4-207ENST00000433496 DISP1Q96F81 1524 aa16.29■□□□□ 0.2
RFC4-207ENST00000433496 ABCC10Q5T3U5 1492 aa16.29■□□□□ 0.2
RFC4-207ENST00000433496 ABCC2Q92887 1545 aa16.27■□□□□ 0.2
RFC4-207ENST00000433496 FAM69CQ0P6D2 419 aa16.26■□□□□ 0.19
RFC4-207ENST00000433496 GOLGA3Q08378 1498 aa16.26■□□□□ 0.19
RFC4-207ENST00000433496 TSPOAP1O95153 1857 aa16.26■□□□□ 0.19
RFC4-207ENST00000433496 PRXQ9BXM0 1461 aa16.25■□□□□ 0.19
RFC4-207ENST00000433496 UHRF1BP1LA0JNW5 1464 aa16.24■□□□□ 0.19
RFC4-207ENST00000433496 UACAQ9BZF9 1416 aa16.24■□□□□ 0.19
RFC4-207ENST00000433496 PHF23Q9BUL5 403 aaPredicted RBP16.23■□□□□ 0.19
RFC4-207ENST00000433496 EEA1Q15075 1411 aa16.2■□□□□ 0.18
RFC4-207ENST00000433496 ZCCHC11Q5TAX3 1644 aaKnown RBP16.19■□□□□ 0.18
RFC4-207ENST00000433496 PLB1Q6P1J6 1458 aa16.19■□□□□ 0.18
RFC4-207ENST00000433496 ASXL2Q76L83 1435 aa16.18■□□□□ 0.18
RFC4-207ENST00000433496 CSRNP3Q8WYN3 585 aa16.17■□□□□ 0.18
RFC4-207ENST00000433496 KDM6BO15054 1643 aa16.16■□□□□ 0.18
RFC4-207ENST00000433496 KDM5BQ9UGL1 1544 aa16.16■□□□□ 0.18
RFC4-207ENST00000433496 FAM9AQ8IZU1 332 aaPredicted RBP16.16■□□□□ 0.18
RFC4-207ENST00000433496 SENP3Q9H4L4 574 aaPredicted RBP16.16■□□□□ 0.18
RFC4-207ENST00000433496 GLI2P10070 1586 aa16.13■□□□□ 0.17
RFC4-207ENST00000433496 ABCA8O94911 1581 aa16.11■□□□□ 0.17
RFC4-207ENST00000433496 SAMD9Q5K651 1589 aa16.09■□□□□ 0.17
RFC4-207ENST00000433496 KIF21BO75037 1637 aa16.08■□□□□ 0.17
RFC4-207ENST00000433496 MAP3K4Q9Y6R4 1608 aa16.08■□□□□ 0.17
RFC4-207ENST00000433496 PPRC1Q5VV67 1664 aaKnown RBP16.08■□□□□ 0.17
RFC4-207ENST00000433496 EPRSP07814 1512 aaKnown RBP16.08■□□□□ 0.16
RFC4-207ENST00000433496 WDR7Q9Y4E6 1490 aa16.07■□□□□ 0.16
RFC4-207ENST00000433496 TEX14Q8IWB6 1497 aa16.05■□□□□ 0.16
RFC4-207ENST00000433496 P3H3Q8IVL6 736 aa16.04■□□□□ 0.16
RFC4-207ENST00000433496 CFAP43Q8NDM7 1665 aa16.02■□□□□ 0.16
RFC4-207ENST00000433496 RAPGEF6Q8TEU7 1601 aa16.02■□□□□ 0.16
RFC4-207ENST00000433496 RANGAP1P46060 587 aaPredicted RBP16.01■□□□□ 0.15
RFC4-207ENST00000433496 EFCAB5A4FU69 1503 aa15.99■□□□□ 0.15
RFC4-207ENST00000433496 ARID3CA6NKF2 412 aa15.96■□□□□ 0.15
RFC4-207ENST00000433496 KCNH8Q96L42 1107 aa15.96■□□□□ 0.15
RFC4-207ENST00000433496 FHOD3Q2V2M9 1422 aa15.94■□□□□ 0.14
RFC4-207ENST00000433496 CD109Q6YHK3 1445 aa15.94■□□□□ 0.14
RFC4-207ENST00000433496 ATP10BO94823 1461 aa15.93■□□□□ 0.14
RFC4-207ENST00000433496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.93■□□□□ 0.14
RFC4-207ENST00000433496 HNRNPUL2Q1KMD3 747 aaKnown RBP15.93■□□□□ 0.14
RFC4-207ENST00000433496 UBTFP17480 764 aaKnown RBP15.92■□□□□ 0.14
RFC4-207ENST00000433496 MAGI3Q5TCQ9 1506 aa15.92■□□□□ 0.14
RFC4-207ENST00000433496 EHMT2Q96KQ7 1210 aa15.91■□□□□ 0.14
RFC4-207ENST00000433496 ABCA9Q8IUA7 1624 aa15.9■□□□□ 0.14
RFC4-207ENST00000433496 NUP153P49790 1475 aaKnown RBP15.89■□□□□ 0.13
RFC4-207ENST00000433496 COL17A1Q9UMD9 1497 aaPredicted RBP15.85■□□□□ 0.13
RFC4-207ENST00000433496 HECW1Q76N89 1606 aa15.83■□□□□ 0.13
RFC4-207ENST00000433496 FMN1Q68DA7 1419 aa15.82■□□□□ 0.12
RFC4-207ENST00000433496 PLEKHD1A6NEE1 506 aa15.8■□□□□ 0.12
RFC4-207ENST00000433496 CFAP74Q9C0B2 1584 aa15.79■□□□□ 0.12
RFC4-207ENST00000433496 ARAP3Q8WWN8 1544 aa15.79■□□□□ 0.12
RFC4-207ENST00000433496 ADGRL1O94910 1474 aa15.79■□□□□ 0.12
RFC4-207ENST00000433496 ARHGAP35Q9NRY4 1499 aa15.78■□□□□ 0.12
RFC4-207ENST00000433496 PHLDB1Q86UU1 1377 aa15.78■□□□□ 0.12
RFC4-207ENST00000433496 CDK13Q14004 1512 aaKnown RBP15.78■□□□□ 0.12
RFC4-207ENST00000433496 NEO1Q92859 1461 aa15.78■□□□□ 0.12
RFC4-207ENST00000433496 KDM4FA0A1W2PPD8 638 aa15.77■□□□□ 0.12
RFC4-207ENST00000433496 ATP1B4Q9UN42 357 aaPredicted RBP15.77■□□□□ 0.12
RFC4-207ENST00000433496 TTC37Q6PGP7 1564 aa15.75■□□□□ 0.11
RFC4-207ENST00000433496 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.73■□□□□ 0.11
RFC4-207ENST00000433496 MYO5CQ9NQX4 1742 aa15.72■□□□□ 0.11
RFC4-207ENST00000433496 CDK11AQ9UQ88 783 aaPredicted RBP15.71■□□□□ 0.11
RFC4-207ENST00000433496 KIF14Q15058 1648 aa15.71■□□□□ 0.11
RFC4-207ENST00000433496 FANCAO15360 1455 aa15.71■□□□□ 0.1
RFC4-207ENST00000433496 LRRIQ1Q96JM4 1722 aa15.7■□□□□ 0.1
RFC4-207ENST00000433496 RICTORQ6R327 1708 aa15.68■□□□□ 0.1
RFC4-207ENST00000433496 PCF11O94913 1555 aaKnown RBP15.68■□□□□ 0.1
RFC4-207ENST00000433496 FRMPD1Q5SYB0 1578 aa15.68■□□□□ 0.1
RFC4-207ENST00000433496 CLIP1P30622 1438 aa15.68■□□□□ 0.1
RFC4-207ENST00000433496 DENND4BO75064 1496 aaPredicted RBP15.66■□□□□ 0.1
RFC4-207ENST00000433496 CCDC18Q5T9S5 1454 aa15.66■□□□□ 0.1
RFC4-207ENST00000433496 RAPGEF3O95398 923 aa15.66■□□□□ 0.1
RFC4-207ENST00000433496 AKNAQ7Z591 1439 aa15.66■□□□□ 0.1
RFC4-207ENST00000433496 ARHGEF40Q8TER5 1519 aa15.64■□□□□ 0.09
RFC4-207ENST00000433496 TROQ12816 1431 aaPredicted RBP15.63■□□□□ 0.09
RFC4-207ENST00000433496 CASKIN1Q8WXD9 1431 aa15.63■□□□□ 0.09
RFC4-207ENST00000433496 FYCO1Q9BQS8 1478 aa15.63■□□□□ 0.09
RFC4-207ENST00000433496 PLCH2O75038 1416 aa15.61■□□□□ 0.09
RFC4-207ENST00000433496 ARHGAP5Q13017 1502 aa15.6■□□□□ 0.09
RFC4-207ENST00000433496 ZMYM4Q5VZL5 1548 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms