RNA–Protein interactions for RNA: ENST00000433463.1

POLR2B-204, Transcript of RNA polymerase II subunit B, humanhuman

TSL 3

Gene POLR2B, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-204ENST00000433463 CUL7Q14999 1698 aa40.33■■■■■ 4.05
POLR2B-204ENST00000433463 RUSC2Q8N2Y8 1516 aa40.32■■■■■ 4.04
POLR2B-204ENST00000433463 KIAA0586Q9BVV6 1533 aa40.24■■■■■ 4.03
POLR2B-204ENST00000433463 CARMIL1Q5VZK9 1371 aa40.22■■■■■ 4.03
POLR2B-204ENST00000433463 NPM1P06748 294 aaKnown RBP eCLIP40.09■■■■■ 4.01
POLR2B-204ENST00000433463 CARMIL2Q6F5E8 1435 aa39.91■■■■□ 3.98
POLR2B-204ENST00000433463 PTPRGP23470 1445 aa39.87■■■■□ 3.97
POLR2B-204ENST00000433463 RAPGEF2Q9Y4G8 1499 aa39.86■■■■□ 3.97
POLR2B-204ENST00000433463 IQGAP2Q13576 1575 aa39.84■■■■□ 3.97
POLR2B-204ENST00000433463 ADCY10Q96PN6 1610 aa39.84■■■■□ 3.97
POLR2B-204ENST00000433463 TTBK1Q5TCY1 1321 aaPredicted RBP39.84■■■■□ 3.97
POLR2B-204ENST00000433463 KIF13AQ9H1H9 1805 aa39.8■■■■□ 3.96
POLR2B-204ENST00000433463 FAM69CQ0P6D2 419 aa39.8■■■■□ 3.96
POLR2B-204ENST00000433463 TNIKQ9UKE5 1360 aa39.8■■■■□ 3.96
POLR2B-204ENST00000433463 MAPKBP1O60336 1514 aa39.79■■■■□ 3.96
POLR2B-204ENST00000433463 ABCC10Q5T3U5 1492 aa39.75■■■■□ 3.95
POLR2B-204ENST00000433463 DISP1Q96F81 1524 aa39.61■■■■□ 3.93
POLR2B-204ENST00000433463 DIP2BQ9P265 1576 aa39.6■■■■□ 3.93
POLR2B-204ENST00000433463 UGGT2Q9NYU1 1516 aa39.6■■■■□ 3.93
POLR2B-204ENST00000433463 ABCC2Q92887 1545 aa39.56■■■■□ 3.92
POLR2B-204ENST00000433463 AEBP2Q6ZN18 517 aaPredicted RBP39.55■■■■□ 3.92
POLR2B-204ENST00000433463 UACAQ9BZF9 1416 aa39.54■■■■□ 3.92
POLR2B-204ENST00000433463 UHRF1BP1LA0JNW5 1464 aa39.52■■■■□ 3.92
POLR2B-204ENST00000433463 KIAA0556O60303 1618 aa39.46■■■■□ 3.91
POLR2B-204ENST00000433463 CTTNBP2Q8WZ74 1663 aa39.45■■■■□ 3.91
POLR2B-204ENST00000433463 PRXQ9BXM0 1461 aa39.45■■■■□ 3.91
POLR2B-204ENST00000433463 PLB1Q6P1J6 1458 aa39.43■■■■□ 3.9
POLR2B-204ENST00000433463 ASXL2Q76L83 1435 aa39.41■■■■□ 3.9
POLR2B-204ENST00000433463 GOLGA3Q08378 1498 aa39.38■■■■□ 3.9
POLR2B-204ENST00000433463 TSPOAP1O95153 1857 aa39.37■■■■□ 3.89
POLR2B-204ENST00000433463 CSRNP3Q8WYN3 585 aa39.33■■■■□ 3.89
POLR2B-204ENST00000433463 KDM5BQ9UGL1 1544 aa39.32■■■■□ 3.89
POLR2B-204ENST00000433463 KDM6BO15054 1643 aa39.26■■■■□ 3.88
POLR2B-204ENST00000433463 FAM9AQ8IZU1 332 aaPredicted RBP39.26■■■■□ 3.88
POLR2B-204ENST00000433463 GLI2P10070 1586 aa39.25■■■■□ 3.87
POLR2B-204ENST00000433463 ZCCHC11Q5TAX3 1644 aaKnown RBP39.21■■■■□ 3.87
POLR2B-204ENST00000433463 EEA1Q15075 1411 aa39.16■■■■□ 3.86
POLR2B-204ENST00000433463 EPRSP07814 1512 aaKnown RBP39.15■■■■□ 3.86
POLR2B-204ENST00000433463 ABCA8O94911 1581 aa39.08■■■■□ 3.85
POLR2B-204ENST00000433463 P3H3Q8IVL6 736 aa39.08■■■■□ 3.85
POLR2B-204ENST00000433463 WDR7Q9Y4E6 1490 aa39.06■■■■□ 3.84
POLR2B-204ENST00000433463 PPRC1Q5VV67 1664 aaKnown RBP39.03■■■■□ 3.84
POLR2B-204ENST00000433463 MAP3K4Q9Y6R4 1608 aa39.01■■■■□ 3.84
POLR2B-204ENST00000433463 TEX14Q8IWB6 1497 aa38.99■■■■□ 3.83
POLR2B-204ENST00000433463 KCNH8Q96L42 1107 aa38.98■■■■□ 3.83
POLR2B-204ENST00000433463 RANGAP1P46060 587 aaPredicted RBP38.89■■■■□ 3.82
POLR2B-204ENST00000433463 SAMD9Q5K651 1589 aa38.88■■■■□ 3.81
POLR2B-204ENST00000433463 ARID3CA6NKF2 412 aa38.88■■■■□ 3.81
POLR2B-204ENST00000433463 CD109Q6YHK3 1445 aa38.85■■■■□ 3.81
POLR2B-204ENST00000433463 ATP10BO94823 1461 aa38.81■■■■□ 3.8
POLR2B-204ENST00000433463 COL17A1Q9UMD9 1497 aaPredicted RBP38.8■■■■□ 3.8
POLR2B-204ENST00000433463 CFAP43Q8NDM7 1665 aa38.79■■■■□ 3.8
POLR2B-204ENST00000433463 KDM4FA0A1W2PPD8 638 aa38.77■■■■□ 3.8
POLR2B-204ENST00000433463 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.76■■■■□ 3.8
POLR2B-204ENST00000433463 HNRNPUL2Q1KMD3 747 aaKnown RBP38.76■■■■□ 3.8
POLR2B-204ENST00000433463 MAGI3Q5TCQ9 1506 aa38.76■■■■□ 3.8
POLR2B-204ENST00000433463 CHIC1Q5VXU3 224 aa38.75■■■■□ 3.79
POLR2B-204ENST00000433463 KIF21BO75037 1637 aa38.74■■■■□ 3.79
POLR2B-204ENST00000433463 RAPGEF6Q8TEU7 1601 aa38.73■■■■□ 3.79
POLR2B-204ENST00000433463 FHOD3Q2V2M9 1422 aa38.68■■■■□ 3.78
POLR2B-204ENST00000433463 UBTFP17480 764 aaKnown RBP38.63■■■■□ 3.77
POLR2B-204ENST00000433463 EFCAB5A4FU69 1503 aa38.6■■■■□ 3.77
POLR2B-204ENST00000433463 EHMT2Q96KQ7 1210 aa38.6■■■■□ 3.77
POLR2B-204ENST00000433463 NUP153P49790 1475 aaKnown RBP38.58■■■■□ 3.77
POLR2B-204ENST00000433463 PLEKHD1A6NEE1 506 aa38.53■■■■□ 3.76
POLR2B-204ENST00000433463 ABCA9Q8IUA7 1624 aa38.52■■■■□ 3.76
POLR2B-204ENST00000433463 ADGRL1O94910 1474 aa38.51■■■■□ 3.76
POLR2B-204ENST00000433463 PHLDB1Q86UU1 1377 aa38.49■■■■□ 3.75
POLR2B-204ENST00000433463 ARAP3Q8WWN8 1544 aa38.45■■■■□ 3.75
POLR2B-204ENST00000433463 NEO1Q92859 1461 aa38.36■■■■□ 3.73
POLR2B-204ENST00000433463 ATP1B4Q9UN42 357 aaPredicted RBP38.34■■■■□ 3.73
POLR2B-204ENST00000433463 FMN1Q68DA7 1419 aa38.32■■■■□ 3.73
POLR2B-204ENST00000433463 RAPGEF3O95398 923 aa38.28■■■■□ 3.72
POLR2B-204ENST00000433463 ARHGAP35Q9NRY4 1499 aa38.27■■■■□ 3.72
POLR2B-204ENST00000433463 CDK13Q14004 1512 aaKnown RBP38.22■■■■□ 3.71
POLR2B-204ENST00000433463 CDK11AQ9UQ88 783 aaPredicted RBP38.2■■■■□ 3.71
POLR2B-204ENST00000433463 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.19■■■■□ 3.7
POLR2B-204ENST00000433463 HECW1Q76N89 1606 aa38.18■■■■□ 3.7
POLR2B-204ENST00000433463 FANCAO15360 1455 aa38.15■■■■□ 3.7
POLR2B-204ENST00000433463 AKNAQ7Z591 1439 aa38.14■■■■□ 3.7
POLR2B-204ENST00000433463 CFAP74Q9C0B2 1584 aa38.12■■■■□ 3.69
POLR2B-204ENST00000433463 DENND4BO75064 1496 aaPredicted RBP38.12■■■■□ 3.69
POLR2B-204ENST00000433463 TTC37Q6PGP7 1564 aa38.1■■■■□ 3.69
POLR2B-204ENST00000433463 FRMPD1Q5SYB0 1578 aa38.05■■■■□ 3.68
POLR2B-204ENST00000433463 ARID4BQ4LE39 1312 aaPredicted RBP38.03■■■■□ 3.68
POLR2B-204ENST00000433463 PLCH2O75038 1416 aa38.02■■■■□ 3.68
POLR2B-204ENST00000433463 RICTORQ6R327 1708 aa37.96■■■■□ 3.67
POLR2B-204ENST00000433463 EFCAB2Q5VUJ9 269 aa37.96■■■■□ 3.67
POLR2B-204ENST00000433463 CLIP1P30622 1438 aa37.95■■■■□ 3.67
POLR2B-204ENST00000433463 TROQ12816 1431 aaPredicted RBP37.95■■■■□ 3.67
POLR2B-204ENST00000433463 SCAPERQ9BY12 1400 aa37.91■■■■□ 3.66
POLR2B-204ENST00000433463 KIF14Q15058 1648 aa37.9■■■■□ 3.66
POLR2B-204ENST00000433463 CASKIN1Q8WXD9 1431 aa37.89■■■■□ 3.66
POLR2B-204ENST00000433463 ARHGEF40Q8TER5 1519 aa37.88■■■■□ 3.65
POLR2B-204ENST00000433463 MYO5CQ9NQX4 1742 aa37.88■■■■□ 3.65
POLR2B-204ENST00000433463 HECW2Q9P2P5 1572 aa37.88■■■■□ 3.65
POLR2B-204ENST00000433463 ADAMTSL3P82987 1691 aa37.86■■■■□ 3.65
POLR2B-204ENST00000433463 ZMYM4Q5VZL5 1548 aa37.85■■■■□ 3.65
POLR2B-204ENST00000433463 CCDC18Q5T9S5 1454 aa37.84■■■■□ 3.65
POLR2B-204ENST00000433463 MAGI2Q86UL8 1455 aa37.84■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms