RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 IGF1RP08069 1367 aa39.71■■■■□ 3.95
HOMER3-203ENST00000433218 KIF13AQ9H1H9 1805 aa39.61■■■■□ 3.93
HOMER3-203ENST00000433218 JPH4Q96JJ6 628 aa39.59■■■■□ 3.93
HOMER3-203ENST00000433218 KIAA0586Q9BVV6 1533 aa39.53■■■■□ 3.92
HOMER3-203ENST00000433218 ADCY10Q96PN6 1610 aa39.5■■■■□ 3.91
HOMER3-203ENST00000433218 CARMIL1Q5VZK9 1371 aa39.43■■■■□ 3.9
HOMER3-203ENST00000433218 IQGAP2Q13576 1575 aa39.34■■■■□ 3.89
HOMER3-203ENST00000433218 MAPKBP1O60336 1514 aa39.25■■■■□ 3.87
HOMER3-203ENST00000433218 DIP2BQ9P265 1576 aa39.24■■■■□ 3.87
HOMER3-203ENST00000433218 RAPGEF2Q9Y4G8 1499 aa39.16■■■■□ 3.86
HOMER3-203ENST00000433218 CTTNBP2Q8WZ74 1663 aa39.15■■■■□ 3.86
HOMER3-203ENST00000433218 ABCC10Q5T3U5 1492 aa39.13■■■■□ 3.86
HOMER3-203ENST00000433218 DISP1Q96F81 1524 aa39.13■■■■□ 3.85
HOMER3-203ENST00000433218 TTBK1Q5TCY1 1321 aaPredicted RBP39.08■■■■□ 3.85
HOMER3-203ENST00000433218 TSPOAP1O95153 1857 aa39.08■■■■□ 3.85
HOMER3-203ENST00000433218 PTPRGP23470 1445 aa39.06■■■■□ 3.84
HOMER3-203ENST00000433218 UGGT2Q9NYU1 1516 aa39.04■■■■□ 3.84
HOMER3-203ENST00000433218 KIAA0556O60303 1618 aa39.04■■■■□ 3.84
HOMER3-203ENST00000433218 CARMIL2Q6F5E8 1435 aa39.03■■■■□ 3.84
HOMER3-203ENST00000433218 TNIKQ9UKE5 1360 aa39.02■■■■□ 3.84
HOMER3-203ENST00000433218 FAM69CQ0P6D2 419 aa38.97■■■■□ 3.83
HOMER3-203ENST00000433218 NPM1P06748 294 aaKnown RBP eCLIP38.96■■■■□ 3.83
HOMER3-203ENST00000433218 ABCC2Q92887 1545 aa38.95■■■■□ 3.83
HOMER3-203ENST00000433218 UHRF1BP1LA0JNW5 1464 aa38.86■■■■□ 3.81
HOMER3-203ENST00000433218 PRXQ9BXM0 1461 aa38.86■■■■□ 3.81
HOMER3-203ENST00000433218 PPRC1Q5VV67 1664 aaKnown RBP38.85■■■■□ 3.81
HOMER3-203ENST00000433218 ZCCHC11Q5TAX3 1644 aaKnown RBP38.85■■■■□ 3.81
HOMER3-203ENST00000433218 UACAQ9BZF9 1416 aa38.82■■■■□ 3.8
HOMER3-203ENST00000433218 ASXL2Q76L83 1435 aa38.79■■■■□ 3.8
HOMER3-203ENST00000433218 KDM6BO15054 1643 aa38.79■■■■□ 3.8
HOMER3-203ENST00000433218 KDM5BQ9UGL1 1544 aa38.73■■■■□ 3.79
HOMER3-203ENST00000433218 GLI2P10070 1586 aa38.69■■■■□ 3.78
HOMER3-203ENST00000433218 PLB1Q6P1J6 1458 aa38.68■■■■□ 3.78
HOMER3-203ENST00000433218 MAP3K4Q9Y6R4 1608 aa38.64■■■■□ 3.78
HOMER3-203ENST00000433218 ABCA8O94911 1581 aa38.62■■■■□ 3.77
HOMER3-203ENST00000433218 EPRSP07814 1512 aaKnown RBP38.59■■■■□ 3.77
HOMER3-203ENST00000433218 GOLGA3Q08378 1498 aa38.58■■■■□ 3.77
HOMER3-203ENST00000433218 AEBP2Q6ZN18 517 aaPredicted RBP38.54■■■■□ 3.76
HOMER3-203ENST00000433218 SAMD9Q5K651 1589 aa38.5■■■■□ 3.75
HOMER3-203ENST00000433218 WDR7Q9Y4E6 1490 aa38.46■■■■□ 3.75
HOMER3-203ENST00000433218 CSRNP3Q8WYN3 585 aa38.39■■■■□ 3.74
HOMER3-203ENST00000433218 COL17A1Q9UMD9 1497 aaPredicted RBP38.37■■■■□ 3.73
HOMER3-203ENST00000433218 CFAP43Q8NDM7 1665 aa38.34■■■■□ 3.73
HOMER3-203ENST00000433218 P3H3Q8IVL6 736 aa38.33■■■■□ 3.73
HOMER3-203ENST00000433218 EEA1Q15075 1411 aa38.31■■■■□ 3.72
HOMER3-203ENST00000433218 KIF21BO75037 1637 aa38.27■■■■□ 3.72
HOMER3-203ENST00000433218 RAPGEF6Q8TEU7 1601 aa38.27■■■■□ 3.72
HOMER3-203ENST00000433218 FAM9AQ8IZU1 332 aaPredicted RBP38.25■■■■□ 3.71
HOMER3-203ENST00000433218 TEX14Q8IWB6 1497 aa38.25■■■■□ 3.71
HOMER3-203ENST00000433218 ARID3CA6NKF2 412 aa38.24■■■■□ 3.71
HOMER3-203ENST00000433218 ATP10BO94823 1461 aa38.19■■■■□ 3.7
HOMER3-203ENST00000433218 FHOD3Q2V2M9 1422 aa38.16■■■■□ 3.7
HOMER3-203ENST00000433218 KDM4FA0A1W2PPD8 638 aa38.16■■■■□ 3.7
HOMER3-203ENST00000433218 RANGAP1P46060 587 aaPredicted RBP38.12■■■■□ 3.69
HOMER3-203ENST00000433218 KCNH8Q96L42 1107 aa38.12■■■■□ 3.69
HOMER3-203ENST00000433218 MAGI3Q5TCQ9 1506 aa38.12■■■■□ 3.69
HOMER3-203ENST00000433218 CD109Q6YHK3 1445 aa38.11■■■■□ 3.69
HOMER3-203ENST00000433218 NUP153P49790 1475 aaKnown RBP38.09■■■■□ 3.69
HOMER3-203ENST00000433218 ABCA9Q8IUA7 1624 aa38.08■■■■□ 3.69
HOMER3-203ENST00000433218 ADGRL1O94910 1474 aa38.02■■■■□ 3.68
HOMER3-203ENST00000433218 EFCAB5A4FU69 1503 aa38■■■■□ 3.67
HOMER3-203ENST00000433218 CHIC1Q5VXU3 224 aa37.96■■■■□ 3.67
HOMER3-203ENST00000433218 EHMT2Q96KQ7 1210 aa37.95■■■■□ 3.67
HOMER3-203ENST00000433218 CDK13Q14004 1512 aaKnown RBP37.82■■■■□ 3.65
HOMER3-203ENST00000433218 ARAP3Q8WWN8 1544 aa37.82■■■■□ 3.65
HOMER3-203ENST00000433218 FRMPD1Q5SYB0 1578 aa37.82■■■■□ 3.64
HOMER3-203ENST00000433218 TTC37Q6PGP7 1564 aa37.79■■■■□ 3.64
HOMER3-203ENST00000433218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.78■■■■□ 3.64
HOMER3-203ENST00000433218 HNRNPUL2Q1KMD3 747 aaKnown RBP37.78■■■■□ 3.64
HOMER3-203ENST00000433218 LRRIQ1Q96JM4 1722 aa37.76■■■■□ 3.64
HOMER3-203ENST00000433218 ARHGAP35Q9NRY4 1499 aa37.76■■■■□ 3.64
HOMER3-203ENST00000433218 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.72■■■■□ 3.63
HOMER3-203ENST00000433218 NEO1Q92859 1461 aa37.67■■■■□ 3.62
HOMER3-203ENST00000433218 HECW1Q76N89 1606 aa37.67■■■■□ 3.62
HOMER3-203ENST00000433218 RICTORQ6R327 1708 aa37.67■■■■□ 3.62
HOMER3-203ENST00000433218 UBTFP17480 764 aaKnown RBP37.66■■■■□ 3.62
HOMER3-203ENST00000433218 RAPGEF3O95398 923 aa37.58■■■■□ 3.61
HOMER3-203ENST00000433218 CFAP74Q9C0B2 1584 aa37.58■■■■□ 3.61
HOMER3-203ENST00000433218 KIF14Q15058 1648 aa37.57■■■■□ 3.6
HOMER3-203ENST00000433218 HECW2Q9P2P5 1572 aa37.53■■■■□ 3.6
HOMER3-203ENST00000433218 FMN1Q68DA7 1419 aa37.52■■■■□ 3.6
HOMER3-203ENST00000433218 FANCAO15360 1455 aa37.52■■■■□ 3.6
HOMER3-203ENST00000433218 PHLDB1Q86UU1 1377 aa37.52■■■■□ 3.6
HOMER3-203ENST00000433218 PLEKHD1A6NEE1 506 aa37.52■■■■□ 3.6
HOMER3-203ENST00000433218 ARHGEF40Q8TER5 1519 aa37.52■■■■□ 3.6
HOMER3-203ENST00000433218 PCF11O94913 1555 aaKnown RBP37.5■■■■□ 3.59
HOMER3-203ENST00000433218 MYO5CQ9NQX4 1742 aa37.5■■■■□ 3.59
HOMER3-203ENST00000433218 SIGLEC1Q9BZZ2 1709 aa37.5■■■■□ 3.59
HOMER3-203ENST00000433218 ADAMTSL3P82987 1691 aa37.49■■■■□ 3.59
HOMER3-203ENST00000433218 BCORL1Q5H9F3 1711 aa37.46■■■■□ 3.59
HOMER3-203ENST00000433218 AKNAQ7Z591 1439 aa37.45■■■■□ 3.59
HOMER3-203ENST00000433218 DENND4BO75064 1496 aaPredicted RBP37.4■■■■□ 3.58
HOMER3-203ENST00000433218 MADDQ8WXG6 1647 aa37.4■■■■□ 3.58
HOMER3-203ENST00000433218 ATP1B4Q9UN42 357 aaPredicted RBP37.39■■■■□ 3.58
HOMER3-203ENST00000433218 ZMYM4Q5VZL5 1548 aa37.39■■■■□ 3.58
HOMER3-203ENST00000433218 CDC42BPBQ9Y5S2 1711 aa37.3■■■■□ 3.56
HOMER3-203ENST00000433218 PLCH2O75038 1416 aa37.3■■■■□ 3.56
HOMER3-203ENST00000433218 TROQ12816 1431 aaPredicted RBP37.28■■■■□ 3.56
HOMER3-203ENST00000433218 YEATS2Q9ULM3 1422 aa37.28■■■■□ 3.56
HOMER3-203ENST00000433218 RIMS1Q86UR5 1692 aaKnown RBP37.28■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms