RNA–Protein interactions for RNA: ENST00000433028.6

CHEK2-213, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-213ENST00000433028 CUL7Q14999 1698 aa23.3■■□□□ 1.32
CHEK2-213ENST00000433028 PRG4Q92954 1404 aaPredicted RBP23.29■■□□□ 1.32
CHEK2-213ENST00000433028 IGF1RP08069 1367 aa23.28■■□□□ 1.32
CHEK2-213ENST00000433028 JPH4Q96JJ6 628 aa23.28■■□□□ 1.32
CHEK2-213ENST00000433028 KIAA0586Q9BVV6 1533 aa23.2■■□□□ 1.3
CHEK2-213ENST00000433028 CARMIL1Q5VZK9 1371 aa23.13■■□□□ 1.29
CHEK2-213ENST00000433028 KIF13AQ9H1H9 1805 aa23.11■■□□□ 1.29
CHEK2-213ENST00000433028 ADCY10Q96PN6 1610 aa23.06■■□□□ 1.28
CHEK2-213ENST00000433028 MAPKBP1O60336 1514 aa23.02■■□□□ 1.28
CHEK2-213ENST00000433028 IQGAP2Q13576 1575 aa23■■□□□ 1.27
CHEK2-213ENST00000433028 NPM1P06748 294 aaKnown RBP eCLIP22.97■■□□□ 1.27
CHEK2-213ENST00000433028 ABCC10Q5T3U5 1492 aa22.97■■□□□ 1.27
CHEK2-213ENST00000433028 CARMIL2Q6F5E8 1435 aa22.94■■□□□ 1.26
CHEK2-213ENST00000433028 RAPGEF2Q9Y4G8 1499 aa22.94■■□□□ 1.26
CHEK2-213ENST00000433028 PTPRGP23470 1445 aa22.94■■□□□ 1.26
CHEK2-213ENST00000433028 DIP2BQ9P265 1576 aa22.93■■□□□ 1.26
CHEK2-213ENST00000433028 TNIKQ9UKE5 1360 aa22.91■■□□□ 1.26
CHEK2-213ENST00000433028 DISP1Q96F81 1524 aa22.88■■□□□ 1.25
CHEK2-213ENST00000433028 FAM69CQ0P6D2 419 aa22.87■■□□□ 1.25
CHEK2-213ENST00000433028 UGGT2Q9NYU1 1516 aa22.86■■□□□ 1.25
CHEK2-213ENST00000433028 ABCC2Q92887 1545 aa22.83■■□□□ 1.25
CHEK2-213ENST00000433028 CTTNBP2Q8WZ74 1663 aa22.82■■□□□ 1.24
CHEK2-213ENST00000433028 UHRF1BP1LA0JNW5 1464 aa22.82■■□□□ 1.24
CHEK2-213ENST00000433028 KIAA0556O60303 1618 aa22.79■■□□□ 1.24
CHEK2-213ENST00000433028 TTBK1Q5TCY1 1321 aaPredicted RBP22.79■■□□□ 1.24
CHEK2-213ENST00000433028 UACAQ9BZF9 1416 aa22.78■■□□□ 1.24
CHEK2-213ENST00000433028 TSPOAP1O95153 1857 aa22.78■■□□□ 1.24
CHEK2-213ENST00000433028 PRXQ9BXM0 1461 aa22.75■■□□□ 1.23
CHEK2-213ENST00000433028 PLB1Q6P1J6 1458 aa22.73■■□□□ 1.23
CHEK2-213ENST00000433028 ASXL2Q76L83 1435 aa22.73■■□□□ 1.23
CHEK2-213ENST00000433028 KDM5BQ9UGL1 1544 aa22.71■■□□□ 1.23
CHEK2-213ENST00000433028 GLI2P10070 1586 aa22.7■■□□□ 1.22
CHEK2-213ENST00000433028 KDM6BO15054 1643 aa22.69■■□□□ 1.22
CHEK2-213ENST00000433028 ZCCHC11Q5TAX3 1644 aaKnown RBP22.67■■□□□ 1.22
CHEK2-213ENST00000433028 GOLGA3Q08378 1498 aa22.67■■□□□ 1.22
CHEK2-213ENST00000433028 PPRC1Q5VV67 1664 aaKnown RBP22.65■■□□□ 1.22
CHEK2-213ENST00000433028 EPRSP07814 1512 aaKnown RBP22.6■■□□□ 1.21
CHEK2-213ENST00000433028 MAP3K4Q9Y6R4 1608 aa22.59■■□□□ 1.21
CHEK2-213ENST00000433028 ABCA8O94911 1581 aa22.58■■□□□ 1.21
CHEK2-213ENST00000433028 CSRNP3Q8WYN3 585 aa22.55■■□□□ 1.2
CHEK2-213ENST00000433028 WDR7Q9Y4E6 1490 aa22.53■■□□□ 1.2
CHEK2-213ENST00000433028 EEA1Q15075 1411 aa22.51■■□□□ 1.19
CHEK2-213ENST00000433028 SENP3Q9H4L4 574 aaPredicted RBP22.51■■□□□ 1.19
CHEK2-213ENST00000433028 TEX14Q8IWB6 1497 aa22.48■■□□□ 1.19
CHEK2-213ENST00000433028 SAMD9Q5K651 1589 aa22.47■■□□□ 1.19
CHEK2-213ENST00000433028 CFAP43Q8NDM7 1665 aa22.45■■□□□ 1.18
CHEK2-213ENST00000433028 COL17A1Q9UMD9 1497 aaPredicted RBP22.43■■□□□ 1.18
CHEK2-213ENST00000433028 FAM9AQ8IZU1 332 aaPredicted RBP22.4■■□□□ 1.18
CHEK2-213ENST00000433028 MAGI3Q5TCQ9 1506 aa22.39■■□□□ 1.17
CHEK2-213ENST00000433028 KDM4FA0A1W2PPD8 638 aa22.38■■□□□ 1.17
CHEK2-213ENST00000433028 P3H3Q8IVL6 736 aa22.38■■□□□ 1.17
CHEK2-213ENST00000433028 ATP10BO94823 1461 aa22.37■■□□□ 1.17
CHEK2-213ENST00000433028 CD109Q6YHK3 1445 aa22.36■■□□□ 1.17
CHEK2-213ENST00000433028 KIF21BO75037 1637 aa22.36■■□□□ 1.17
CHEK2-213ENST00000433028 RAPGEF6Q8TEU7 1601 aa22.36■■□□□ 1.17
CHEK2-213ENST00000433028 KCNH8Q96L42 1107 aa22.34■■□□□ 1.17
CHEK2-213ENST00000433028 ABCA9Q8IUA7 1624 aa22.28■■□□□ 1.16
CHEK2-213ENST00000433028 ARID3CA6NKF2 412 aa22.27■■□□□ 1.16
CHEK2-213ENST00000433028 EFCAB5A4FU69 1503 aa22.26■■□□□ 1.15
CHEK2-213ENST00000433028 NUP153P49790 1475 aaKnown RBP22.26■■□□□ 1.15
CHEK2-213ENST00000433028 FHOD3Q2V2M9 1422 aa22.26■■□□□ 1.15
CHEK2-213ENST00000433028 ADGRL1O94910 1474 aa22.24■■□□□ 1.15
CHEK2-213ENST00000433028 ARAP3Q8WWN8 1544 aa22.21■■□□□ 1.15
CHEK2-213ENST00000433028 RANGAP1P46060 587 aaPredicted RBP22.21■■□□□ 1.15
CHEK2-213ENST00000433028 PHLDB1Q86UU1 1377 aa22.17■■□□□ 1.14
CHEK2-213ENST00000433028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.15■■□□□ 1.14
CHEK2-213ENST00000433028 HNRNPUL2Q1KMD3 747 aaKnown RBP22.15■■□□□ 1.14
CHEK2-213ENST00000433028 PHF23Q9BUL5 403 aaPredicted RBP22.14■■□□□ 1.14
CHEK2-213ENST00000433028 NEO1Q92859 1461 aa22.13■■□□□ 1.13
CHEK2-213ENST00000433028 PLEKHD1A6NEE1 506 aa22.09■■□□□ 1.13
CHEK2-213ENST00000433028 UBTFP17480 764 aaKnown RBP22.08■■□□□ 1.13
CHEK2-213ENST00000433028 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.04■■□□□ 1.12
CHEK2-213ENST00000433028 ARHGAP35Q9NRY4 1499 aa22.04■■□□□ 1.12
CHEK2-213ENST00000433028 FRMPD1Q5SYB0 1578 aa22.04■■□□□ 1.12
CHEK2-213ENST00000433028 CDK13Q14004 1512 aaKnown RBP22.04■■□□□ 1.12
CHEK2-213ENST00000433028 FMN1Q68DA7 1419 aa22.03■■□□□ 1.12
CHEK2-213ENST00000433028 CFAP74Q9C0B2 1584 aa22.02■■□□□ 1.12
CHEK2-213ENST00000433028 EHMT2Q96KQ7 1210 aa22.02■■□□□ 1.12
CHEK2-213ENST00000433028 HECW1Q76N89 1606 aa22.02■■□□□ 1.11
CHEK2-213ENST00000433028 TTC37Q6PGP7 1564 aa22.01■■□□□ 1.11
CHEK2-213ENST00000433028 RAPGEF3O95398 923 aa22.01■■□□□ 1.11
CHEK2-213ENST00000433028 RICTORQ6R327 1708 aa22■■□□□ 1.11
CHEK2-213ENST00000433028 FANCAO15360 1455 aa21.98■■□□□ 1.11
CHEK2-213ENST00000433028 AKNAQ7Z591 1439 aa21.95■■□□□ 1.11
CHEK2-213ENST00000433028 DENND4BO75064 1496 aaPredicted RBP21.94■■□□□ 1.1
CHEK2-213ENST00000433028 ADAMTSL3P82987 1691 aa21.94■■□□□ 1.1
CHEK2-213ENST00000433028 HECW2Q9P2P5 1572 aa21.93■■□□□ 1.1
CHEK2-213ENST00000433028 LRRIQ1Q96JM4 1722 aa21.92■■□□□ 1.1
CHEK2-213ENST00000433028 ARHGEF40Q8TER5 1519 aa21.92■■□□□ 1.1
CHEK2-213ENST00000433028 BCORL1Q5H9F3 1711 aa21.9■■□□□ 1.1
CHEK2-213ENST00000433028 MYO5CQ9NQX4 1742 aa21.9■■□□□ 1.1
CHEK2-213ENST00000433028 ZMYM4Q5VZL5 1548 aa21.9■■□□□ 1.1
CHEK2-213ENST00000433028 PLCH2O75038 1416 aa21.89■■□□□ 1.1
CHEK2-213ENST00000433028 ATP1B4Q9UN42 357 aaPredicted RBP21.88■■□□□ 1.09
CHEK2-213ENST00000433028 CDK11AQ9UQ88 783 aaPredicted RBP21.88■■□□□ 1.09
CHEK2-213ENST00000433028 KIF14Q15058 1648 aa21.86■■□□□ 1.09
CHEK2-213ENST00000433028 TROQ12816 1431 aaPredicted RBP21.84■■□□□ 1.09
CHEK2-213ENST00000433028 PTPRMP28827 1452 aa21.83■■□□□ 1.09
CHEK2-213ENST00000433028 MAGI2Q86UL8 1455 aa21.83■■□□□ 1.09
CHEK2-213ENST00000433028 MADDQ8WXG6 1647 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms