RNA–Protein interactions for RNA: ENST00000431716.2

CDRT15-202, CMT1A duplicated region transcript 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDRT15, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-202ENST00000431716 NUP160Q12769 1436 aa25.04■■□□□ 1.6
CDRT15-202ENST00000431716 RAPGEF2Q9Y4G8 1499 aa25.02■■□□□ 1.6
CDRT15-202ENST00000431716 ARAP1Q96P48 1450 aa25.01■■□□□ 1.59
CDRT15-202ENST00000431716 PRXQ9BXM0 1461 aa25.01■■□□□ 1.59
CDRT15-202ENST00000431716 CEP170Q5SW79 1584 aa24.99■■□□□ 1.59
CDRT15-202ENST00000431716 JPH4Q96JJ6 628 aa24.92■■□□□ 1.58
CDRT15-202ENST00000431716 KIF21BO75037 1637 aa24.86■■□□□ 1.57
CDRT15-202ENST00000431716 KIAA0586Q9BVV6 1533 aa24.84■■□□□ 1.57
CDRT15-202ENST00000431716 PRG4Q92954 1404 aaPredicted RBP24.84■■□□□ 1.57
CDRT15-202ENST00000431716 ERCC6L2Q5T890 1561 aa24.8■■□□□ 1.56
CDRT15-202ENST00000431716 SHROOM2Q13796 1616 aa24.79■■□□□ 1.56
CDRT15-202ENST00000431716 TRHP20396 242 aaPredicted RBP24.78■■□□□ 1.56
CDRT15-202ENST00000431716 GOLGA3Q08378 1498 aa24.76■■□□□ 1.55
CDRT15-202ENST00000431716 IQGAP2Q13576 1575 aa24.72■■□□□ 1.55
CDRT15-202ENST00000431716 UBTFP17480 764 aaKnown RBP24.71■■□□□ 1.55
CDRT15-202ENST00000431716 CTTNBP2Q8WZ74 1663 aa24.71■■□□□ 1.55
CDRT15-202ENST00000431716 EHMT2Q96KQ7 1210 aa24.68■■□□□ 1.54
CDRT15-202ENST00000431716 TTBK1Q5TCY1 1321 aaPredicted RBP24.61■■□□□ 1.53
CDRT15-202ENST00000431716 CARMIL2Q6F5E8 1435 aa24.61■■□□□ 1.53
CDRT15-202ENST00000431716 UGGT2Q9NYU1 1516 aa24.61■■□□□ 1.53
CDRT15-202ENST00000431716 NPM1P06748 294 aaKnown RBP eCLIP24.58■■□□□ 1.53
CDRT15-202ENST00000431716 PTPRGP23470 1445 aa24.55■■□□□ 1.52
CDRT15-202ENST00000431716 TNIKQ9UKE5 1360 aa24.54■■□□□ 1.52
CDRT15-202ENST00000431716 DISP1Q96F81 1524 aa24.51■■□□□ 1.51
CDRT15-202ENST00000431716 LOC105371045A0A1W2PR82 267 aa24.51■■□□□ 1.51
CDRT15-202ENST00000431716 RANGAP1P46060 587 aaPredicted RBP24.47■■□□□ 1.51
CDRT15-202ENST00000431716 KIAA0556O60303 1618 aa24.46■■□□□ 1.51
CDRT15-202ENST00000431716 SAMD9Q5K651 1589 aa24.42■■□□□ 1.5
CDRT15-202ENST00000431716 EFCAB5A4FU69 1503 aa24.42■■□□□ 1.5
CDRT15-202ENST00000431716 P3H3Q8IVL6 736 aa24.39■■□□□ 1.49
CDRT15-202ENST00000431716 ADCY10Q96PN6 1610 aa24.35■■□□□ 1.49
CDRT15-202ENST00000431716 UACAQ9BZF9 1416 aa24.34■■□□□ 1.49
CDRT15-202ENST00000431716 CLIP1P30622 1438 aa24.33■■□□□ 1.49
CDRT15-202ENST00000431716 ARHGAP35Q9NRY4 1499 aa24.32■■□□□ 1.48
CDRT15-202ENST00000431716 FAM69CQ0P6D2 419 aa24.31■■□□□ 1.48
CDRT15-202ENST00000431716 FHOD3Q2V2M9 1422 aa24.3■■□□□ 1.48
CDRT15-202ENST00000431716 CEP162Q5TB80 1403 aa24.29■■□□□ 1.48
CDRT15-202ENST00000431716 UHRF1BP1LA0JNW5 1464 aa24.27■■□□□ 1.48
CDRT15-202ENST00000431716 ABCC2Q92887 1545 aa24.27■■□□□ 1.48
CDRT15-202ENST00000431716 MAPKBP1O60336 1514 aa24.26■■□□□ 1.47
CDRT15-202ENST00000431716 ILDR1Q86SU0 546 aaPredicted RBP24.23■■□□□ 1.47
CDRT15-202ENST00000431716 ABCC10Q5T3U5 1492 aa24.23■■□□□ 1.47
CDRT15-202ENST00000431716 FMN1Q68DA7 1419 aa24.21■■□□□ 1.47
CDRT15-202ENST00000431716 PLB1Q6P1J6 1458 aa24.19■■□□□ 1.46
CDRT15-202ENST00000431716 ABCA8O94911 1581 aa24.18■■□□□ 1.46
CDRT15-202ENST00000431716 ASXL2Q76L83 1435 aa24.17■■□□□ 1.46
CDRT15-202ENST00000431716 KDM5BQ9UGL1 1544 aa24.15■■□□□ 1.46
CDRT15-202ENST00000431716 RAPGEF6Q8TEU7 1601 aa24.12■■□□□ 1.45
CDRT15-202ENST00000431716 DIP2BQ9P265 1576 aa24.1■■□□□ 1.45
CDRT15-202ENST00000431716 ARID3CA6NKF2 412 aa24.09■■□□□ 1.45
CDRT15-202ENST00000431716 KIF13AQ9H1H9 1805 aa24.07■■□□□ 1.44
CDRT15-202ENST00000431716 CASKIN1Q8WXD9 1431 aa24.05■■□□□ 1.44
CDRT15-202ENST00000431716 ZCCHC11Q5TAX3 1644 aaKnown RBP24.04■■□□□ 1.44
CDRT15-202ENST00000431716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.04■■□□□ 1.44
CDRT15-202ENST00000431716 HNRNPUL2Q1KMD3 747 aaKnown RBP24.04■■□□□ 1.44
CDRT15-202ENST00000431716 ATP1B4Q9UN42 357 aaPredicted RBP24.04■■□□□ 1.44
CDRT15-202ENST00000431716 NUP153P49790 1475 aaKnown RBP24.04■■□□□ 1.44
CDRT15-202ENST00000431716 KCNH8Q96L42 1107 aa24.03■■□□□ 1.44
CDRT15-202ENST00000431716 ATP10BO94823 1461 aa24.01■■□□□ 1.43
CDRT15-202ENST00000431716 HECW1Q76N89 1606 aa24.01■■□□□ 1.43
CDRT15-202ENST00000431716 FYCO1Q9BQS8 1478 aa24■■□□□ 1.43
CDRT15-202ENST00000431716 WDR7Q9Y4E6 1490 aa24■■□□□ 1.43
CDRT15-202ENST00000431716 EPRSP07814 1512 aaKnown RBP24■■□□□ 1.43
CDRT15-202ENST00000431716 VPS8Q8N3P4 1428 aa23.99■■□□□ 1.43
CDRT15-202ENST00000431716 PCF11O94913 1555 aaKnown RBP23.97■■□□□ 1.43
CDRT15-202ENST00000431716 GLI2P10070 1586 aa23.96■■□□□ 1.43
CDRT15-202ENST00000431716 CCDC18Q5T9S5 1454 aa23.92■■□□□ 1.42
CDRT15-202ENST00000431716 CDK11AQ9UQ88 783 aaPredicted RBP23.91■■□□□ 1.42
CDRT15-202ENST00000431716 PLEKHD1A6NEE1 506 aa23.9■■□□□ 1.42
CDRT15-202ENST00000431716 CDK13Q14004 1512 aaKnown RBP23.89■■□□□ 1.41
CDRT15-202ENST00000431716 TSPOAP1O95153 1857 aa23.88■■□□□ 1.41
CDRT15-202ENST00000431716 CD109Q6YHK3 1445 aa23.85■■□□□ 1.41
CDRT15-202ENST00000431716 LRRIQ1Q96JM4 1722 aa23.85■■□□□ 1.41
CDRT15-202ENST00000431716 TEX14Q8IWB6 1497 aa23.84■■□□□ 1.41
CDRT15-202ENST00000431716 KDM6BO15054 1643 aa23.81■■□□□ 1.4
CDRT15-202ENST00000431716 MAP3K4Q9Y6R4 1608 aa23.81■■□□□ 1.4
CDRT15-202ENST00000431716 APLP2Q06481 763 aa23.8■■□□□ 1.4
CDRT15-202ENST00000431716 MAP3K1Q13233 1512 aa23.76■■□□□ 1.39
CDRT15-202ENST00000431716 TROQ12816 1431 aaPredicted RBP23.76■■□□□ 1.39
CDRT15-202ENST00000431716 MAGI3Q5TCQ9 1506 aa23.74■■□□□ 1.39
CDRT15-202ENST00000431716 PPRC1Q5VV67 1664 aaKnown RBP23.73■■□□□ 1.39
CDRT15-202ENST00000431716 TIAM1Q13009 1591 aa23.72■■□□□ 1.39
CDRT15-202ENST00000431716 CFAP43Q8NDM7 1665 aa23.71■■□□□ 1.39
CDRT15-202ENST00000431716 MTUS2Q5JR59 1369 aa23.71■■□□□ 1.39
CDRT15-202ENST00000431716 COL17A1Q9UMD9 1497 aaPredicted RBP23.67■■□□□ 1.38
CDRT15-202ENST00000431716 ABCA9Q8IUA7 1624 aa23.66■■□□□ 1.38
CDRT15-202ENST00000431716 KIF14Q15058 1648 aa23.65■■□□□ 1.38
CDRT15-202ENST00000431716 EHBP1L1Q8N3D4 1523 aa23.64■■□□□ 1.38
CDRT15-202ENST00000431716 LRRC9Q6ZRR7 1453 aa23.64■■□□□ 1.38
CDRT15-202ENST00000431716 KANK4Q5T7N3 995 aaPredicted RBP23.62■■□□□ 1.37
CDRT15-202ENST00000431716 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.62■■□□□ 1.37
CDRT15-202ENST00000431716 PHLDB1Q86UU1 1377 aa23.62■■□□□ 1.37
CDRT15-202ENST00000431716 TTC37Q6PGP7 1564 aa23.57■■□□□ 1.36
CDRT15-202ENST00000431716 NEO1Q92859 1461 aa23.56■■□□□ 1.36
CDRT15-202ENST00000431716 SUPT6HQ7KZ85 1726 aaKnown RBP23.54■■□□□ 1.36
CDRT15-202ENST00000431716 ARAP3Q8WWN8 1544 aa23.54■■□□□ 1.36
CDRT15-202ENST00000431716 PLCH2O75038 1416 aa23.53■■□□□ 1.36
CDRT15-202ENST00000431716 RAPGEF3O95398 923 aa23.53■■□□□ 1.36
CDRT15-202ENST00000431716 CCNB3Q8WWL7 1395 aa23.52■■□□□ 1.36
CDRT15-202ENST00000431716 NCOA2Q15596 1464 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms