RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 JPH4Q96JJ6 628 aa29.19■■■□□ 2.26
UBE3D-204ENST00000430071 PRG4Q92954 1404 aaPredicted RBP29.19■■■□□ 2.26
UBE3D-204ENST00000430071 CARMIL1Q5VZK9 1371 aa29.13■■■□□ 2.25
UBE3D-204ENST00000430071 KIAA0586Q9BVV6 1533 aa29.08■■■□□ 2.25
UBE3D-204ENST00000430071 RAPGEF2Q9Y4G8 1499 aa28.9■■■□□ 2.22
UBE3D-204ENST00000430071 IQGAP2Q13576 1575 aa28.89■■■□□ 2.22
UBE3D-204ENST00000430071 ADCY10Q96PN6 1610 aa28.88■■■□□ 2.21
UBE3D-204ENST00000430071 KIF13AQ9H1H9 1805 aa28.87■■■□□ 2.21
UBE3D-204ENST00000430071 TTBK1Q5TCY1 1321 aaPredicted RBP28.81■■■□□ 2.2
UBE3D-204ENST00000430071 CTTNBP2Q8WZ74 1663 aa28.77■■■□□ 2.2
UBE3D-204ENST00000430071 DISP1Q96F81 1524 aa28.76■■■□□ 2.19
UBE3D-204ENST00000430071 PTPRGP23470 1445 aa28.74■■■□□ 2.19
UBE3D-204ENST00000430071 CARMIL2Q6F5E8 1435 aa28.71■■■□□ 2.19
UBE3D-204ENST00000430071 TNIKQ9UKE5 1360 aa28.71■■■□□ 2.19
UBE3D-204ENST00000430071 UGGT2Q9NYU1 1516 aa28.71■■■□□ 2.19
UBE3D-204ENST00000430071 PRXQ9BXM0 1461 aa28.7■■■□□ 2.19
UBE3D-204ENST00000430071 MAPKBP1O60336 1514 aa28.67■■■□□ 2.18
UBE3D-204ENST00000430071 NPM1P06748 294 aaKnown RBP eCLIP28.66■■■□□ 2.18
UBE3D-204ENST00000430071 KIAA0556O60303 1618 aa28.65■■■□□ 2.18
UBE3D-204ENST00000430071 DIP2BQ9P265 1576 aa28.61■■■□□ 2.17
UBE3D-204ENST00000430071 ABCC10Q5T3U5 1492 aa28.61■■■□□ 2.17
UBE3D-204ENST00000430071 FAM69CQ0P6D2 419 aa28.59■■■□□ 2.17
UBE3D-204ENST00000430071 TSPOAP1O95153 1857 aa28.58■■■□□ 2.17
UBE3D-204ENST00000430071 ABCC2Q92887 1545 aa28.55■■■□□ 2.16
UBE3D-204ENST00000430071 CSRNP3Q8WYN3 585 aa28.55■■■□□ 2.16
UBE3D-204ENST00000430071 UACAQ9BZF9 1416 aa28.53■■■□□ 2.16
UBE3D-204ENST00000430071 UHRF1BP1LA0JNW5 1464 aa28.53■■■□□ 2.16
UBE3D-204ENST00000430071 FAM9AQ8IZU1 332 aaPredicted RBP28.5■■■□□ 2.15
UBE3D-204ENST00000430071 ZCCHC11Q5TAX3 1644 aaKnown RBP28.45■■■□□ 2.15
UBE3D-204ENST00000430071 ASXL2Q76L83 1435 aa28.44■■■□□ 2.14
UBE3D-204ENST00000430071 PLB1Q6P1J6 1458 aa28.43■■■□□ 2.14
UBE3D-204ENST00000430071 KDM5BQ9UGL1 1544 aa28.42■■■□□ 2.14
UBE3D-204ENST00000430071 CHIC1Q5VXU3 224 aa28.42■■■□□ 2.14
UBE3D-204ENST00000430071 GOLGA3Q08378 1498 aa28.41■■■□□ 2.14
UBE3D-204ENST00000430071 EEA1Q15075 1411 aa28.4■■■□□ 2.14
UBE3D-204ENST00000430071 P3H3Q8IVL6 736 aa28.38■■■□□ 2.13
UBE3D-204ENST00000430071 ABCA8O94911 1581 aa28.37■■■□□ 2.13
UBE3D-204ENST00000430071 PPRC1Q5VV67 1664 aaKnown RBP28.36■■■□□ 2.13
UBE3D-204ENST00000430071 SAMD9Q5K651 1589 aa28.31■■■□□ 2.12
UBE3D-204ENST00000430071 GLI2P10070 1586 aa28.31■■■□□ 2.12
UBE3D-204ENST00000430071 KIF21BO75037 1637 aa28.28■■■□□ 2.12
UBE3D-204ENST00000430071 EPRSP07814 1512 aaKnown RBP28.27■■■□□ 2.12
UBE3D-204ENST00000430071 RANGAP1P46060 587 aaPredicted RBP28.27■■■□□ 2.12
UBE3D-204ENST00000430071 KDM6BO15054 1643 aa28.26■■■□□ 2.11
UBE3D-204ENST00000430071 MAP3K4Q9Y6R4 1608 aa28.24■■■□□ 2.11
UBE3D-204ENST00000430071 EHMT2Q96KQ7 1210 aa28.24■■■□□ 2.11
UBE3D-204ENST00000430071 ARID3CA6NKF2 412 aa28.21■■■□□ 2.11
UBE3D-204ENST00000430071 WDR7Q9Y4E6 1490 aa28.19■■■□□ 2.1
UBE3D-204ENST00000430071 FHOD3Q2V2M9 1422 aa28.14■■■□□ 2.1
UBE3D-204ENST00000430071 RAPGEF6Q8TEU7 1601 aa28.14■■■□□ 2.1
UBE3D-204ENST00000430071 ATP10BO94823 1461 aa28.13■■■□□ 2.09
UBE3D-204ENST00000430071 KCNH8Q96L42 1107 aa28.11■■■□□ 2.09
UBE3D-204ENST00000430071 COL17A1Q9UMD9 1497 aaPredicted RBP28.09■■■□□ 2.09
UBE3D-204ENST00000430071 CFAP43Q8NDM7 1665 aa28.06■■■□□ 2.08
UBE3D-204ENST00000430071 UBTFP17480 764 aaKnown RBP28.02■■■□□ 2.08
UBE3D-204ENST00000430071 AEBP2Q6ZN18 517 aaPredicted RBP28.02■■■□□ 2.08
UBE3D-204ENST00000430071 NUP153P49790 1475 aaKnown RBP28.02■■■□□ 2.08
UBE3D-204ENST00000430071 EFCAB5A4FU69 1503 aa28■■■□□ 2.07
UBE3D-204ENST00000430071 CD109Q6YHK3 1445 aa27.99■■■□□ 2.07
UBE3D-204ENST00000430071 TEX14Q8IWB6 1497 aa27.98■■■□□ 2.07
UBE3D-204ENST00000430071 MAGI3Q5TCQ9 1506 aa27.94■■■□□ 2.06
UBE3D-204ENST00000430071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.92■■■□□ 2.06
UBE3D-204ENST00000430071 HNRNPUL2Q1KMD3 747 aaKnown RBP27.92■■■□□ 2.06
UBE3D-204ENST00000430071 ARHGAP35Q9NRY4 1499 aa27.91■■■□□ 2.06
UBE3D-204ENST00000430071 ABCA9Q8IUA7 1624 aa27.91■■■□□ 2.06
UBE3D-204ENST00000430071 KDM4FA0A1W2PPD8 638 aa27.86■■■□□ 2.05
UBE3D-204ENST00000430071 CDK13Q14004 1512 aaKnown RBP27.84■■■□□ 2.05
UBE3D-204ENST00000430071 LRRIQ1Q96JM4 1722 aa27.81■■■□□ 2.04
UBE3D-204ENST00000430071 PLEKHD1A6NEE1 506 aa27.74■■■□□ 2.03
UBE3D-204ENST00000430071 ATP1B4Q9UN42 357 aaPredicted RBP27.73■■■□□ 2.03
UBE3D-204ENST00000430071 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.72■■■□□ 2.03
UBE3D-204ENST00000430071 ARAP3Q8WWN8 1544 aa27.72■■■□□ 2.03
UBE3D-204ENST00000430071 TTC37Q6PGP7 1564 aa27.72■■■□□ 2.03
UBE3D-204ENST00000430071 HECW1Q76N89 1606 aa27.72■■■□□ 2.03
UBE3D-204ENST00000430071 FMN1Q68DA7 1419 aa27.72■■■□□ 2.03
UBE3D-204ENST00000430071 ADGRL1O94910 1474 aa27.69■■■□□ 2.02
UBE3D-204ENST00000430071 RAPGEF3O95398 923 aa27.64■■■□□ 2.02
UBE3D-204ENST00000430071 FRMPD1Q5SYB0 1578 aa27.64■■■□□ 2.02
UBE3D-204ENST00000430071 NEO1Q92859 1461 aa27.64■■■□□ 2.01
UBE3D-204ENST00000430071 PCF11O94913 1555 aaKnown RBP27.62■■■□□ 2.01
UBE3D-204ENST00000430071 KIF14Q15058 1648 aa27.6■■■□□ 2.01
UBE3D-204ENST00000430071 PHLDB1Q86UU1 1377 aa27.58■■■□□ 2.01
UBE3D-204ENST00000430071 RICTORQ6R327 1708 aa27.57■■■□□ 2
UBE3D-204ENST00000430071 FANCAO15360 1455 aa27.55■■■□□ 2
UBE3D-204ENST00000430071 AKNAQ7Z591 1439 aa27.54■■■□□ 2
UBE3D-204ENST00000430071 MYO5CQ9NQX4 1742 aa27.54■■■□□ 2
UBE3D-204ENST00000430071 CLIP1P30622 1438 aa27.54■■■□□ 2
UBE3D-204ENST00000430071 CASKIN1Q8WXD9 1431 aa27.52■■■□□ 2
UBE3D-204ENST00000430071 CFAP74Q9C0B2 1584 aa27.52■■■□□ 2
UBE3D-204ENST00000430071 TROQ12816 1431 aaPredicted RBP27.5■■□□□ 1.99
UBE3D-204ENST00000430071 PLCH2O75038 1416 aa27.48■■□□□ 1.99
UBE3D-204ENST00000430071 DENND4BO75064 1496 aaPredicted RBP27.47■■□□□ 1.99
UBE3D-204ENST00000430071 CDK11AQ9UQ88 783 aaPredicted RBP27.46■■□□□ 1.99
UBE3D-204ENST00000430071 CDC42BPBQ9Y5S2 1711 aa27.44■■□□□ 1.98
UBE3D-204ENST00000430071 FYCO1Q9BQS8 1478 aa27.41■■□□□ 1.98
UBE3D-204ENST00000430071 CCDC18Q5T9S5 1454 aa27.4■■□□□ 1.98
UBE3D-204ENST00000430071 SIGLEC1Q9BZZ2 1709 aa27.4■■□□□ 1.98
UBE3D-204ENST00000430071 ARHGEF40Q8TER5 1519 aa27.38■■□□□ 1.97
UBE3D-204ENST00000430071 SCAPERQ9BY12 1400 aa27.38■■□□□ 1.97
UBE3D-204ENST00000430071 ADAMTSL3P82987 1691 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms