RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 KIF27Q86VH2 1401 aa29.86■■■□□ 2.37
CPSF4-203ENST00000430038 CUL7Q14999 1698 aa29.77■■■□□ 2.36
CPSF4-203ENST00000430038 KIAA0586Q9BVV6 1533 aa29.71■■■□□ 2.35
CPSF4-203ENST00000430038 CARMIL1Q5VZK9 1371 aa29.69■■■□□ 2.34
CPSF4-203ENST00000430038 KIF13AQ9H1H9 1805 aa29.59■■■□□ 2.33
CPSF4-203ENST00000430038 ADCY10Q96PN6 1610 aa29.56■■■□□ 2.32
CPSF4-203ENST00000430038 IQGAP2Q13576 1575 aa29.44■■■□□ 2.3
CPSF4-203ENST00000430038 TTBK1Q5TCY1 1321 aaPredicted RBP29.42■■■□□ 2.3
CPSF4-203ENST00000430038 RAPGEF2Q9Y4G8 1499 aa29.42■■■□□ 2.3
CPSF4-203ENST00000430038 PTPRGP23470 1445 aa29.4■■■□□ 2.3
CPSF4-203ENST00000430038 MAPKBP1O60336 1514 aa29.4■■■□□ 2.3
CPSF4-203ENST00000430038 ABCC10Q5T3U5 1492 aa29.38■■■□□ 2.29
CPSF4-203ENST00000430038 NPM1P06748 294 aaKnown RBP eCLIP29.38■■■□□ 2.29
CPSF4-203ENST00000430038 DISP1Q96F81 1524 aa29.38■■■□□ 2.29
CPSF4-203ENST00000430038 FAM69CQ0P6D2 419 aa29.36■■■□□ 2.29
CPSF4-203ENST00000430038 TNIKQ9UKE5 1360 aa29.36■■■□□ 2.29
CPSF4-203ENST00000430038 DIP2BQ9P265 1576 aa29.34■■■□□ 2.29
CPSF4-203ENST00000430038 CARMIL2Q6F5E8 1435 aa29.33■■■□□ 2.29
CPSF4-203ENST00000430038 UGGT2Q9NYU1 1516 aa29.29■■■□□ 2.28
CPSF4-203ENST00000430038 ABCC2Q92887 1545 aa29.22■■■□□ 2.27
CPSF4-203ENST00000430038 PRXQ9BXM0 1461 aa29.21■■■□□ 2.27
CPSF4-203ENST00000430038 TSPOAP1O95153 1857 aa29.21■■■□□ 2.27
CPSF4-203ENST00000430038 KIAA0556O60303 1618 aa29.2■■■□□ 2.27
CPSF4-203ENST00000430038 CTTNBP2Q8WZ74 1663 aa29.2■■■□□ 2.26
CPSF4-203ENST00000430038 UACAQ9BZF9 1416 aa29.19■■■□□ 2.26
CPSF4-203ENST00000430038 UHRF1BP1LA0JNW5 1464 aa29.18■■■□□ 2.26
CPSF4-203ENST00000430038 ASXL2Q76L83 1435 aa29.13■■■□□ 2.25
CPSF4-203ENST00000430038 KDM5BQ9UGL1 1544 aa29.09■■■□□ 2.25
CPSF4-203ENST00000430038 ZCCHC11Q5TAX3 1644 aaKnown RBP29.05■■■□□ 2.24
CPSF4-203ENST00000430038 PPRC1Q5VV67 1664 aaKnown RBP29.05■■■□□ 2.24
CPSF4-203ENST00000430038 PLB1Q6P1J6 1458 aa29.04■■■□□ 2.24
CPSF4-203ENST00000430038 GLI2P10070 1586 aa29.01■■■□□ 2.24
CPSF4-203ENST00000430038 AEBP2Q6ZN18 517 aaPredicted RBP29.01■■■□□ 2.23
CPSF4-203ENST00000430038 CSRNP3Q8WYN3 585 aa29.01■■■□□ 2.23
CPSF4-203ENST00000430038 KDM6BO15054 1643 aa28.99■■■□□ 2.23
CPSF4-203ENST00000430038 EPRSP07814 1512 aaKnown RBP28.96■■■□□ 2.23
CPSF4-203ENST00000430038 GOLGA3Q08378 1498 aa28.96■■■□□ 2.23
CPSF4-203ENST00000430038 ABCA8O94911 1581 aa28.96■■■□□ 2.23
CPSF4-203ENST00000430038 P3H3Q8IVL6 736 aa28.91■■■□□ 2.22
CPSF4-203ENST00000430038 MAP3K4Q9Y6R4 1608 aa28.91■■■□□ 2.22
CPSF4-203ENST00000430038 COL17A1Q9UMD9 1497 aaPredicted RBP28.86■■■□□ 2.21
CPSF4-203ENST00000430038 FAM9AQ8IZU1 332 aaPredicted RBP28.86■■■□□ 2.21
CPSF4-203ENST00000430038 WDR7Q9Y4E6 1490 aa28.84■■■□□ 2.21
CPSF4-203ENST00000430038 SAMD9Q5K651 1589 aa28.81■■■□□ 2.2
CPSF4-203ENST00000430038 EEA1Q15075 1411 aa28.78■■■□□ 2.2
CPSF4-203ENST00000430038 ARID3CA6NKF2 412 aa28.78■■■□□ 2.2
CPSF4-203ENST00000430038 KDM4FA0A1W2PPD8 638 aa28.77■■■□□ 2.2
CPSF4-203ENST00000430038 KCNH8Q96L42 1107 aa28.76■■■□□ 2.19
CPSF4-203ENST00000430038 ATP10BO94823 1461 aa28.73■■■□□ 2.19
CPSF4-203ENST00000430038 RANGAP1P46060 587 aaPredicted RBP28.73■■■□□ 2.19
CPSF4-203ENST00000430038 CHIC1Q5VXU3 224 aa28.7■■■□□ 2.18
CPSF4-203ENST00000430038 TEX14Q8IWB6 1497 aa28.67■■■□□ 2.18
CPSF4-203ENST00000430038 CFAP43Q8NDM7 1665 aa28.67■■■□□ 2.18
CPSF4-203ENST00000430038 CD109Q6YHK3 1445 aa28.66■■■□□ 2.18
CPSF4-203ENST00000430038 KIF21BO75037 1637 aa28.65■■■□□ 2.18
CPSF4-203ENST00000430038 RAPGEF6Q8TEU7 1601 aa28.64■■■□□ 2.18
CPSF4-203ENST00000430038 FHOD3Q2V2M9 1422 aa28.63■■■□□ 2.17
CPSF4-203ENST00000430038 MAGI3Q5TCQ9 1506 aa28.63■■■□□ 2.17
CPSF4-203ENST00000430038 EHMT2Q96KQ7 1210 aa28.59■■■□□ 2.17
CPSF4-203ENST00000430038 NUP153P49790 1475 aaKnown RBP28.58■■■□□ 2.17
CPSF4-203ENST00000430038 ABCA9Q8IUA7 1624 aa28.51■■■□□ 2.15
CPSF4-203ENST00000430038 ADGRL1O94910 1474 aa28.47■■■□□ 2.15
CPSF4-203ENST00000430038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.46■■■□□ 2.15
CPSF4-203ENST00000430038 HNRNPUL2Q1KMD3 747 aaKnown RBP28.46■■■□□ 2.15
CPSF4-203ENST00000430038 EFCAB5A4FU69 1503 aa28.45■■■□□ 2.15
CPSF4-203ENST00000430038 UBTFP17480 764 aaKnown RBP28.42■■■□□ 2.14
CPSF4-203ENST00000430038 ARAP3Q8WWN8 1544 aa28.41■■■□□ 2.14
CPSF4-203ENST00000430038 ARHGAP35Q9NRY4 1499 aa28.35■■■□□ 2.13
CPSF4-203ENST00000430038 CDK13Q14004 1512 aaKnown RBP28.34■■■□□ 2.13
CPSF4-203ENST00000430038 PLEKHD1A6NEE1 506 aa28.33■■■□□ 2.13
CPSF4-203ENST00000430038 RAPGEF3O95398 923 aa28.32■■■□□ 2.12
CPSF4-203ENST00000430038 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.29■■■□□ 2.12
CPSF4-203ENST00000430038 NEO1Q92859 1461 aa28.27■■■□□ 2.12
CPSF4-203ENST00000430038 FRMPD1Q5SYB0 1578 aa28.27■■■□□ 2.12
CPSF4-203ENST00000430038 PHLDB1Q86UU1 1377 aa28.26■■■□□ 2.12
CPSF4-203ENST00000430038 TTC37Q6PGP7 1564 aa28.25■■■□□ 2.11
CPSF4-203ENST00000430038 LRRIQ1Q96JM4 1722 aa28.21■■■□□ 2.11
CPSF4-203ENST00000430038 ATP1B4Q9UN42 357 aaPredicted RBP28.2■■■□□ 2.1
CPSF4-203ENST00000430038 FMN1Q68DA7 1419 aa28.18■■■□□ 2.1
CPSF4-203ENST00000430038 AKNAQ7Z591 1439 aa28.17■■■□□ 2.1
CPSF4-203ENST00000430038 RICTORQ6R327 1708 aa28.16■■■□□ 2.1
CPSF4-203ENST00000430038 HECW1Q76N89 1606 aa28.16■■■□□ 2.1
CPSF4-203ENST00000430038 FANCAO15360 1455 aa28.15■■■□□ 2.1
CPSF4-203ENST00000430038 DENND4BO75064 1496 aaPredicted RBP28.09■■■□□ 2.09
CPSF4-203ENST00000430038 KIF14Q15058 1648 aa28.09■■■□□ 2.09
CPSF4-203ENST00000430038 ADAMTSL3P82987 1691 aa28.07■■■□□ 2.08
CPSF4-203ENST00000430038 PLCH2O75038 1416 aa28.07■■■□□ 2.08
CPSF4-203ENST00000430038 CFAP74Q9C0B2 1584 aa28.06■■■□□ 2.08
CPSF4-203ENST00000430038 HECW2Q9P2P5 1572 aa28.05■■■□□ 2.08
CPSF4-203ENST00000430038 SIGLEC1Q9BZZ2 1709 aa28.04■■■□□ 2.08
CPSF4-203ENST00000430038 BCORL1Q5H9F3 1711 aa28.01■■■□□ 2.07
CPSF4-203ENST00000430038 PCF11O94913 1555 aaKnown RBP28.01■■■□□ 2.07
CPSF4-203ENST00000430038 MYO5CQ9NQX4 1742 aa28.01■■■□□ 2.07
CPSF4-203ENST00000430038 ARHGEF40Q8TER5 1519 aa28■■■□□ 2.07
CPSF4-203ENST00000430038 TROQ12816 1431 aaPredicted RBP28■■■□□ 2.07
CPSF4-203ENST00000430038 YEATS2Q9ULM3 1422 aa28■■■□□ 2.07
CPSF4-203ENST00000430038 SCAPERQ9BY12 1400 aa27.99■■■□□ 2.07
CPSF4-203ENST00000430038 ZMYM4Q5VZL5 1548 aa27.97■■■□□ 2.07
CPSF4-203ENST00000430038 CDK11AQ9UQ88 783 aaPredicted RBP27.97■■■□□ 2.07
CPSF4-203ENST00000430038 CASKIN1Q8WXD9 1431 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms