RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 CHIC1Q5VXU3 224 aa29.59■■■□□ 2.33
CTSD-203ENST00000429746 KIAA0586Q9BVV6 1533 aa29.55■■■□□ 2.32
CTSD-203ENST00000429746 PRXQ9BXM0 1461 aa29.54■■■□□ 2.32
CTSD-203ENST00000429746 RAPGEF2Q9Y4G8 1499 aa29.54■■■□□ 2.32
CTSD-203ENST00000429746 JPH4Q96JJ6 628 aa29.45■■■□□ 2.31
CTSD-203ENST00000429746 PRG4Q92954 1404 aaPredicted RBP29.44■■■□□ 2.3
CTSD-203ENST00000429746 EEA1Q15075 1411 aa29.39■■■□□ 2.3
CTSD-203ENST00000429746 IQGAP2Q13576 1575 aa29.39■■■□□ 2.29
CTSD-203ENST00000429746 TRHP20396 242 aaPredicted RBP29.36■■■□□ 2.29
CTSD-203ENST00000429746 CSRNP3Q8WYN3 585 aa29.34■■■□□ 2.29
CTSD-203ENST00000429746 CTTNBP2Q8WZ74 1663 aa29.33■■■□□ 2.29
CTSD-203ENST00000429746 UGGT2Q9NYU1 1516 aa29.28■■■□□ 2.28
CTSD-203ENST00000429746 DISP1Q96F81 1524 aa29.26■■■□□ 2.27
CTSD-203ENST00000429746 KIF21BO75037 1637 aa29.21■■■□□ 2.27
CTSD-203ENST00000429746 FAM9AQ8IZU1 332 aaPredicted RBP29.19■■■□□ 2.26
CTSD-203ENST00000429746 KIAA0556O60303 1618 aa29.16■■■□□ 2.26
CTSD-203ENST00000429746 ADCY10Q96PN6 1610 aa29.11■■■□□ 2.25
CTSD-203ENST00000429746 CARMIL2Q6F5E8 1435 aa29.1■■■□□ 2.25
CTSD-203ENST00000429746 TNIKQ9UKE5 1360 aa29.08■■■□□ 2.25
CTSD-203ENST00000429746 PTPRGP23470 1445 aa29.04■■■□□ 2.24
CTSD-203ENST00000429746 SAMD9Q5K651 1589 aa29.01■■■□□ 2.23
CTSD-203ENST00000429746 GOLGA3Q08378 1498 aa28.97■■■□□ 2.23
CTSD-203ENST00000429746 UHRF1BP1LA0JNW5 1464 aa28.93■■■□□ 2.22
CTSD-203ENST00000429746 NPM1P06748 294 aaKnown RBP eCLIP28.93■■■□□ 2.22
CTSD-203ENST00000429746 ABCC2Q92887 1545 aa28.89■■■□□ 2.22
CTSD-203ENST00000429746 UACAQ9BZF9 1416 aa28.89■■■□□ 2.22
CTSD-203ENST00000429746 MAPKBP1O60336 1514 aa28.89■■■□□ 2.21
CTSD-203ENST00000429746 ABCA8O94911 1581 aa28.86■■■□□ 2.21
CTSD-203ENST00000429746 TTBK1Q5TCY1 1321 aaPredicted RBP28.86■■■□□ 2.21
CTSD-203ENST00000429746 PLB1Q6P1J6 1458 aa28.85■■■□□ 2.21
CTSD-203ENST00000429746 KIF13AQ9H1H9 1805 aa28.83■■■□□ 2.21
CTSD-203ENST00000429746 KDM5BQ9UGL1 1544 aa28.81■■■□□ 2.2
CTSD-203ENST00000429746 EHMT2Q96KQ7 1210 aa28.77■■■□□ 2.2
CTSD-203ENST00000429746 EFCAB5A4FU69 1503 aa28.77■■■□□ 2.2
CTSD-203ENST00000429746 ABCC10Q5T3U5 1492 aa28.77■■■□□ 2.2
CTSD-203ENST00000429746 P3H3Q8IVL6 736 aa28.75■■■□□ 2.19
CTSD-203ENST00000429746 ZCCHC11Q5TAX3 1644 aaKnown RBP28.75■■■□□ 2.19
CTSD-203ENST00000429746 FHOD3Q2V2M9 1422 aa28.74■■■□□ 2.19
CTSD-203ENST00000429746 DIP2BQ9P265 1576 aa28.73■■■□□ 2.19
CTSD-203ENST00000429746 UBTFP17480 764 aaKnown RBP28.71■■■□□ 2.19
CTSD-203ENST00000429746 FAM69CQ0P6D2 419 aa28.7■■■□□ 2.18
CTSD-203ENST00000429746 ARHGAP35Q9NRY4 1499 aa28.7■■■□□ 2.18
CTSD-203ENST00000429746 RANGAP1P46060 587 aaPredicted RBP28.66■■■□□ 2.18
CTSD-203ENST00000429746 ASXL2Q76L83 1435 aa28.66■■■□□ 2.18
CTSD-203ENST00000429746 RAPGEF6Q8TEU7 1601 aa28.65■■■□□ 2.18
CTSD-203ENST00000429746 NUP153P49790 1475 aaKnown RBP28.59■■■□□ 2.17
CTSD-203ENST00000429746 ATP10BO94823 1461 aa28.58■■■□□ 2.17
CTSD-203ENST00000429746 GLI2P10070 1586 aa28.56■■■□□ 2.16
CTSD-203ENST00000429746 EPRSP07814 1512 aaKnown RBP28.53■■■□□ 2.16
CTSD-203ENST00000429746 WDR7Q9Y4E6 1490 aa28.52■■■□□ 2.16
CTSD-203ENST00000429746 PPRC1Q5VV67 1664 aaKnown RBP28.49■■■□□ 2.15
CTSD-203ENST00000429746 MAP3K4Q9Y6R4 1608 aa28.46■■■□□ 2.15
CTSD-203ENST00000429746 TSPOAP1O95153 1857 aa28.45■■■□□ 2.15
CTSD-203ENST00000429746 FMN1Q68DA7 1419 aa28.43■■■□□ 2.14
CTSD-203ENST00000429746 ARID3CA6NKF2 412 aa28.42■■■□□ 2.14
CTSD-203ENST00000429746 LRRIQ1Q96JM4 1722 aa28.41■■■□□ 2.14
CTSD-203ENST00000429746 CLIP1P30622 1438 aa28.41■■■□□ 2.14
CTSD-203ENST00000429746 CDK13Q14004 1512 aaKnown RBP28.37■■■□□ 2.13
CTSD-203ENST00000429746 HECW1Q76N89 1606 aa28.36■■■□□ 2.13
CTSD-203ENST00000429746 LOC105371045A0A1W2PR82 267 aa28.35■■■□□ 2.13
CTSD-203ENST00000429746 KDM6BO15054 1643 aa28.35■■■□□ 2.13
CTSD-203ENST00000429746 PCF11O94913 1555 aaKnown RBP28.34■■■□□ 2.13
CTSD-203ENST00000429746 AEBP2Q6ZN18 517 aaPredicted RBP28.33■■■□□ 2.13
CTSD-203ENST00000429746 CEP162Q5TB80 1403 aa28.32■■■□□ 2.12
CTSD-203ENST00000429746 CFAP43Q8NDM7 1665 aa28.32■■■□□ 2.12
CTSD-203ENST00000429746 ABCA9Q8IUA7 1624 aa28.29■■■□□ 2.12
CTSD-203ENST00000429746 CASKIN1Q8WXD9 1431 aa28.28■■■□□ 2.12
CTSD-203ENST00000429746 KCNH8Q96L42 1107 aa28.25■■■□□ 2.11
CTSD-203ENST00000429746 MAGI3Q5TCQ9 1506 aa28.23■■■□□ 2.11
CTSD-203ENST00000429746 TEX14Q8IWB6 1497 aa28.23■■■□□ 2.11
CTSD-203ENST00000429746 FYCO1Q9BQS8 1478 aa28.21■■■□□ 2.11
CTSD-203ENST00000429746 CD109Q6YHK3 1445 aa28.2■■■□□ 2.11
CTSD-203ENST00000429746 COL17A1Q9UMD9 1497 aaPredicted RBP28.19■■■□□ 2.1
CTSD-203ENST00000429746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.16■■■□□ 2.1
CTSD-203ENST00000429746 HNRNPUL2Q1KMD3 747 aaKnown RBP28.16■■■□□ 2.1
CTSD-203ENST00000429746 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.16■■■□□ 2.1
CTSD-203ENST00000429746 TTC37Q6PGP7 1564 aa28.16■■■□□ 2.1
CTSD-203ENST00000429746 PLEKHD1A6NEE1 506 aa28.13■■■□□ 2.09
CTSD-203ENST00000429746 CCDC18Q5T9S5 1454 aa28.13■■■□□ 2.09
CTSD-203ENST00000429746 KIF14Q15058 1648 aa28.1■■■□□ 2.09
CTSD-203ENST00000429746 ATP1B4Q9UN42 357 aaPredicted RBP28.09■■■□□ 2.09
CTSD-203ENST00000429746 TROQ12816 1431 aaPredicted RBP28.09■■■□□ 2.09
CTSD-203ENST00000429746 ARAP3Q8WWN8 1544 aa28■■■□□ 2.07
CTSD-203ENST00000429746 NEO1Q92859 1461 aa27.98■■■□□ 2.07
CTSD-203ENST00000429746 VPS8Q8N3P4 1428 aa27.98■■■□□ 2.07
CTSD-203ENST00000429746 CDK11AQ9UQ88 783 aaPredicted RBP27.96■■■□□ 2.07
CTSD-203ENST00000429746 PHLDB1Q86UU1 1377 aa27.96■■■□□ 2.07
CTSD-203ENST00000429746 MYO5CQ9NQX4 1742 aa27.94■■■□□ 2.06
CTSD-203ENST00000429746 PLCH2O75038 1416 aa27.93■■■□□ 2.06
CTSD-203ENST00000429746 KDM4FA0A1W2PPD8 638 aa27.93■■■□□ 2.06
CTSD-203ENST00000429746 FRMPD1Q5SYB0 1578 aa27.93■■■□□ 2.06
CTSD-203ENST00000429746 FANCAO15360 1455 aa27.9■■■□□ 2.06
CTSD-203ENST00000429746 CDC42BPBQ9Y5S2 1711 aa27.89■■■□□ 2.06
CTSD-203ENST00000429746 CFAP74Q9C0B2 1584 aa27.88■■■□□ 2.05
CTSD-203ENST00000429746 CDC42BPAQ5VT25 1732 aa27.87■■■□□ 2.05
CTSD-203ENST00000429746 TIAM1Q13009 1591 aa27.86■■■□□ 2.05
CTSD-203ENST00000429746 AKNAQ7Z591 1439 aa27.86■■■□□ 2.05
CTSD-203ENST00000429746 PREX2Q70Z35 1606 aa27.86■■■□□ 2.05
CTSD-203ENST00000429746 RICTORQ6R327 1708 aa27.85■■■□□ 2.05
CTSD-203ENST00000429746 EHBP1L1Q8N3D4 1523 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms