RNA–Protein interactions for RNA: ENST00000428621.5

CLHC1-207, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 2

Gene CLHC1, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-207ENST00000428621 KANK4Q5T7N3 995 aaPredicted RBP12□□□□□ -0.49
CLHC1-207ENST00000428621 ZNF316A6NFI3 1004 aaPredicted RBP11.99□□□□□ -0.49
CLHC1-207ENST00000428621 EFCAB5A4FU69 1503 aa11.99□□□□□ -0.49
CLHC1-207ENST00000428621 FHAD1B1AJZ9 1412 aa11.99□□□□□ -0.49
CLHC1-207ENST00000428621 CCNB3Q8WWL7 1395 aa11.98□□□□□ -0.49
CLHC1-207ENST00000428621 KCNA4P22459 653 aa11.98□□□□□ -0.49
CLHC1-207ENST00000428621 PPP4R3CPQ6ZMV5 832 aa11.98□□□□□ -0.49
CLHC1-207ENST00000428621 CFAP43Q8NDM7 1665 aa11.97□□□□□ -0.49
CLHC1-207ENST00000428621 WDR97A6NE52 1622 aa11.97□□□□□ -0.49
CLHC1-207ENST00000428621 DHX57Q6P158 1386 aaKnown RBP11.97□□□□□ -0.49
CLHC1-207ENST00000428621 LRRC9Q6ZRR7 1453 aa11.94□□□□□ -0.5
CLHC1-207ENST00000428621 AQRO60306 1485 aaKnown RBP eCLIP11.93□□□□□ -0.5
CLHC1-207ENST00000428621 RAD54L2Q9Y4B4 1467 aa11.93□□□□□ -0.5
CLHC1-207ENST00000428621 PCF11O94913 1555 aaKnown RBP11.93□□□□□ -0.5
CLHC1-207ENST00000428621 NESP48681 1621 aa11.93□□□□□ -0.5
CLHC1-207ENST00000428621 FYCO1Q9BQS8 1478 aa11.93□□□□□ -0.5
CLHC1-207ENST00000428621 CTTNBP2Q8WZ74 1663 aa11.92□□□□□ -0.5
CLHC1-207ENST00000428621 ABCA5Q8WWZ7 1642 aa11.92□□□□□ -0.5
CLHC1-207ENST00000428621 SCAF1Q9H7N4 1312 aaKnown RBP11.91□□□□□ -0.5
CLHC1-207ENST00000428621 URB2Q14146 1524 aaKnown RBP11.91□□□□□ -0.5
CLHC1-207ENST00000428621 ACIN1Q9UKV3 1341 aaKnown RBP11.9□□□□□ -0.51
CLHC1-207ENST00000428621 CASKIN1Q8WXD9 1431 aa11.89□□□□□ -0.51
CLHC1-207ENST00000428621 PDS5BQ9NTI5 1447 aa11.89□□□□□ -0.51
CLHC1-207ENST00000428621 CENPBP07199 599 aaPredicted RBP11.88□□□□□ -0.51
CLHC1-207ENST00000428621 SAMD9Q5K651 1589 aa11.85□□□□□ -0.51
CLHC1-207ENST00000428621 FMN1Q68DA7 1419 aa11.85□□□□□ -0.51
CLHC1-207ENST00000428621 FHOD3Q2V2M9 1422 aa11.85□□□□□ -0.51
CLHC1-207ENST00000428621 PHLDB1Q86UU1 1377 aa11.85□□□□□ -0.51
CLHC1-207ENST00000428621 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.85□□□□□ -0.51
CLHC1-207ENST00000428621 THOC2Q8NI27 1593 aaKnown RBP11.84□□□□□ -0.51
CLHC1-207ENST00000428621 SNAPC4Q5SXM2 1469 aa11.83□□□□□ -0.52
CLHC1-207ENST00000428621 GAPVD1Q14C86 1478 aa11.83□□□□□ -0.52
CLHC1-207ENST00000428621 NEUROD1Q13562 356 aa11.83□□□□□ -0.52
CLHC1-207ENST00000428621 RAB3GAP2Q9H2M9 1393 aa11.82□□□□□ -0.52
CLHC1-207ENST00000428621 KIF21AQ7Z4S6 1674 aa11.81□□□□□ -0.52
CLHC1-207ENST00000428621 MAPKBP1O60336 1514 aa11.81□□□□□ -0.52
CLHC1-207ENST00000428621 TARBP1Q13395 1621 aaKnown RBP11.81□□□□□ -0.52
CLHC1-207ENST00000428621 SETD5Q9C0A6 1442 aa11.8□□□□□ -0.52
CLHC1-207ENST00000428621 TDRD9Q8NDG6 1382 aaKnown RBP11.76□□□□□ -0.53
CLHC1-207ENST00000428621 GRIN2BQ13224 1484 aa11.76□□□□□ -0.53
CLHC1-207ENST00000428621 FGD6Q6ZV73 1430 aa11.75□□□□□ -0.53
CLHC1-207ENST00000428621 DNAJC5BQ9UF47 199 aa11.75□□□□□ -0.53
CLHC1-207ENST00000428621 MIER1Q8N108 512 aa11.74□□□□□ -0.53
CLHC1-207ENST00000428621 EHBP1L1Q8N3D4 1523 aa11.74□□□□□ -0.53
CLHC1-207ENST00000428621 PELP1Q8IZL8 1130 aaKnown RBP11.74□□□□□ -0.53
CLHC1-207ENST00000428621 PBRM1Q86U86 1689 aa11.73□□□□□ -0.53
CLHC1-207ENST00000428621 P3H3Q8IVL6 736 aa11.73□□□□□ -0.53
CLHC1-207ENST00000428621 ADAMTS12P58397 1594 aa11.73□□□□□ -0.53
CLHC1-207ENST00000428621 ITGAEP38570 1179 aa11.72□□□□□ -0.53
CLHC1-207ENST00000428621 CCDC18Q5T9S5 1454 aa11.72□□□□□ -0.53
CLHC1-207ENST00000428621 MRC2Q9UBG0 1479 aa11.72□□□□□ -0.53
CLHC1-207ENST00000428621 LRRIQ1Q96JM4 1722 aa11.71□□□□□ -0.54
CLHC1-207ENST00000428621 MTUS2Q5JR59 1369 aa11.7□□□□□ -0.54
CLHC1-207ENST00000428621 ARHGEF11O15085 1522 aa11.7□□□□□ -0.54
CLHC1-207ENST00000428621 FAM50AQ14320 339 aaKnown RBP11.7□□□□□ -0.54
CLHC1-207ENST00000428621 SUPT6HQ7KZ85 1726 aaKnown RBP11.7□□□□□ -0.54
CLHC1-207ENST00000428621 IQGAP2Q13576 1575 aa11.69□□□□□ -0.54
CLHC1-207ENST00000428621 TIMELESSQ9UNS1 1208 aa11.69□□□□□ -0.54
CLHC1-207ENST00000428621 NCOA2Q15596 1464 aa11.69□□□□□ -0.54
CLHC1-207ENST00000428621 HFM1A2PYH4 1435 aa11.69□□□□□ -0.54
CLHC1-207ENST00000428621 MYOM3Q5VTT5 1437 aa11.69□□□□□ -0.54
CLHC1-207ENST00000428621 GTF3C3Q9Y5Q9 886 aa11.69□□□□□ -0.54
CLHC1-207ENST00000428621 HECW1Q76N89 1606 aa11.69□□□□□ -0.54
CLHC1-207ENST00000428621 NCBP3Q53F19 620 aaKnown RBP11.68□□□□□ -0.54
CLHC1-207ENST00000428621 UGGT2Q9NYU1 1516 aa11.68□□□□□ -0.54
CLHC1-207ENST00000428621 MAPK8IP2Q13387 824 aaPredicted RBP11.66□□□□□ -0.54
CLHC1-207ENST00000428621 ATP1B4Q9UN42 357 aaPredicted RBP11.66□□□□□ -0.54
CLHC1-207ENST00000428621 WDR62O43379 1518 aa11.66□□□□□ -0.54
CLHC1-207ENST00000428621 IFT140Q96RY7 1462 aa11.65□□□□□ -0.54
CLHC1-207ENST00000428621 PTPN23Q9H3S7 1636 aa11.65□□□□□ -0.54
CLHC1-207ENST00000428621 TCOF1Q13428 1488 aaKnown RBP11.64□□□□□ -0.55
CLHC1-207ENST00000428621 UACAQ9BZF9 1416 aa11.63□□□□□ -0.55
CLHC1-207ENST00000428621 AKNAQ7Z591 1439 aa11.63□□□□□ -0.55
CLHC1-207ENST00000428621 MAGI3Q5TCQ9 1506 aa11.63□□□□□ -0.55
CLHC1-207ENST00000428621 YTHDC1Q96MU7 727 aaKnown RBP11.62□□□□□ -0.55
CLHC1-207ENST00000428621 PTPRKQ15262 1439 aa11.61□□□□□ -0.55
CLHC1-207ENST00000428621 EPRSP07814 1512 aaKnown RBP11.61□□□□□ -0.55
CLHC1-207ENST00000428621 NAIPQ13075 1403 aa11.61□□□□□ -0.55
CLHC1-207ENST00000428621 GCC2Q8IWJ2 1684 aa11.59□□□□□ -0.55
CLHC1-207ENST00000428621 MIA2Q96PC5 1412 aa11.59□□□□□ -0.55
CLHC1-207ENST00000428621 KIAA0586Q9BVV6 1533 aa11.58□□□□□ -0.56
CLHC1-207ENST00000428621 KIAA0556O60303 1618 aa11.58□□□□□ -0.56
CLHC1-207ENST00000428621 NPM3O75607 178 aaKnown RBP11.56□□□□□ -0.56
CLHC1-207ENST00000428621 CNKSR2Q8WXI2 1034 aa11.56□□□□□ -0.56
CLHC1-207ENST00000428621 EIF4G3O43432 1585 aaKnown RBP11.56□□□□□ -0.56
CLHC1-207ENST00000428621 ZNF608Q9ULD9 1512 aaPredicted RBP11.55□□□□□ -0.56
CLHC1-207ENST00000428621 GRIN2AQ12879 1464 aa11.55□□□□□ -0.56
CLHC1-207ENST00000428621 SIN3AQ96ST3 1273 aa11.55□□□□□ -0.56
CLHC1-207ENST00000428621 DISP1Q96F81 1524 aa11.54□□□□□ -0.56
CLHC1-207ENST00000428621 CDK13Q14004 1512 aaKnown RBP11.54□□□□□ -0.56
CLHC1-207ENST00000428621 MAGI1Q96QZ7 1491 aaPredicted RBP11.53□□□□□ -0.56
CLHC1-207ENST00000428621 PPP1R15AO75807 674 aaPredicted RBP11.53□□□□□ -0.56
CLHC1-207ENST00000428621 TONSLQ96HA7 1378 aa11.52□□□□□ -0.57
CLHC1-207ENST00000428621 RAPGEF6Q8TEU7 1601 aa11.51□□□□□ -0.57
CLHC1-207ENST00000428621 NUP153P49790 1475 aaKnown RBP11.5□□□□□ -0.57
CLHC1-207ENST00000428621 KDM5BQ9UGL1 1544 aa11.5□□□□□ -0.57
CLHC1-207ENST00000428621 ROCK1Q13464 1354 aa11.49□□□□□ -0.57
CLHC1-207ENST00000428621 DNMT1P26358 1616 aaKnown RBP11.48□□□□□ -0.57
CLHC1-207ENST00000428621 SYNJ2O15056 1496 aa11.48□□□□□ -0.57
CLHC1-207ENST00000428621 DENND4BO75064 1496 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms