RNA–Protein interactions for RNA: ENST00000428575.6

XRCC6-206, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2 BASIC

Gene XRCC6, Length 2,148 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-206ENST00000428575 TDRD9Q8NDG6 1382 aaKnown RBP16.65■□□□□ 0.26
XRCC6-206ENST00000428575 GAPVD1Q14C86 1478 aa16.63■□□□□ 0.25
XRCC6-206ENST00000428575 TARBP1Q13395 1621 aaKnown RBP16.62■□□□□ 0.25
XRCC6-206ENST00000428575 CLSPNQ9HAW4 1339 aa16.59■□□□□ 0.25
XRCC6-206ENST00000428575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.55■□□□□ 0.24
XRCC6-206ENST00000428575 CTTNBP2Q8WZ74 1663 aa16.55■□□□□ 0.24
XRCC6-206ENST00000428575 WDR62O43379 1518 aa16.53■□□□□ 0.24
XRCC6-206ENST00000428575 ZNF316A6NFI3 1004 aaPredicted RBP16.51■□□□□ 0.23
XRCC6-206ENST00000428575 EFCAB5A4FU69 1503 aa16.51■□□□□ 0.23
XRCC6-206ENST00000428575 ERCC6Q03468 1493 aa16.51■□□□□ 0.23
XRCC6-206ENST00000428575 KANK4Q5T7N3 995 aaPredicted RBP16.51■□□□□ 0.23
XRCC6-206ENST00000428575 PBRM1Q86U86 1689 aa16.5■□□□□ 0.23
XRCC6-206ENST00000428575 IFT140Q96RY7 1462 aa16.49■□□□□ 0.23
XRCC6-206ENST00000428575 FHAD1B1AJZ9 1412 aa16.49■□□□□ 0.23
XRCC6-206ENST00000428575 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.236e-7■■■■□ 22.3
XRCC6-206ENST00000428575 P3H3Q8IVL6 736 aa16.47■□□□□ 0.23
XRCC6-206ENST00000428575 FHOD3Q2V2M9 1422 aa16.45■□□□□ 0.22
XRCC6-206ENST00000428575 MAP3K1Q13233 1512 aa16.45■□□□□ 0.22
XRCC6-206ENST00000428575 HNRNPUL2Q1KMD3 747 aaKnown RBP16.45■□□□□ 0.22
XRCC6-206ENST00000428575 GRIN2BQ13224 1484 aa16.44■□□□□ 0.22
XRCC6-206ENST00000428575 TIAM1Q13009 1591 aa16.44■□□□□ 0.22
XRCC6-206ENST00000428575 ADAMTS12P58397 1594 aa16.43■□□□□ 0.22
XRCC6-206ENST00000428575 PCF11O94913 1555 aaKnown RBP16.42■□□□□ 0.22
XRCC6-206ENST00000428575 ZNF608Q9ULD9 1512 aaPredicted RBP16.42■□□□□ 0.22
XRCC6-206ENST00000428575 THOC2Q8NI27 1593 aaKnown RBP16.42■□□□□ 0.22
XRCC6-206ENST00000428575 SAMD9Q5K651 1589 aa16.39■□□□□ 0.21
XRCC6-206ENST00000428575 FYCO1Q9BQS8 1478 aa16.39■□□□□ 0.21
XRCC6-206ENST00000428575 FMN1Q68DA7 1419 aa16.38■□□□□ 0.21
XRCC6-206ENST00000428575 CASKIN1Q8WXD9 1431 aa16.38■□□□□ 0.21
XRCC6-206ENST00000428575 RRBP1Q9P2E9 1410 aaKnown RBP16.37■□□□□ 0.21
XRCC6-206ENST00000428575 CFAP43Q8NDM7 1665 aa16.37■□□□□ 0.21
XRCC6-206ENST00000428575 LRRC9Q6ZRR7 1453 aa16.37■□□□□ 0.21
XRCC6-206ENST00000428575 ATP1B4Q9UN42 357 aaPredicted RBP16.36■□□□□ 0.21
XRCC6-206ENST00000428575 EIF4G3O43432 1585 aaKnown RBP16.35■□□□□ 0.21
XRCC6-206ENST00000428575 CCNB3Q8WWL7 1395 aa16.32■□□□□ 0.2
XRCC6-206ENST00000428575 IQGAP2Q13576 1575 aa16.32■□□□□ 0.2
XRCC6-206ENST00000428575 SNAPC4Q5SXM2 1469 aa16.32■□□□□ 0.2
XRCC6-206ENST00000428575 ANP32EQ9BTT0 268 aa16.3■□□□□ 0.2
XRCC6-206ENST00000428575 YTHDC1Q96MU7 727 aaKnown RBP16.28■□□□□ 0.2
XRCC6-206ENST00000428575 MAGI1Q96QZ7 1491 aaPredicted RBP16.26■□□□□ 0.19
XRCC6-206ENST00000428575 GRIN2AQ12879 1464 aa16.25■□□□□ 0.19
XRCC6-206ENST00000428575 PHLDB1Q86UU1 1377 aa16.25■□□□□ 0.19
XRCC6-206ENST00000428575 MIER1Q8N108 512 aa16.24■□□□□ 0.19
XRCC6-206ENST00000428575 KIAA0586Q9BVV6 1533 aa16.23■□□□□ 0.19
XRCC6-206ENST00000428575 UGGT2Q9NYU1 1516 aa16.23■□□□□ 0.19
XRCC6-206ENST00000428575 BCL11AQ9H165 835 aa16.23■□□□□ 0.19
XRCC6-206ENST00000428575 SYNJ2O15056 1496 aa16.21■□□□□ 0.19
XRCC6-206ENST00000428575 LRRIQ1Q96JM4 1722 aa16.2■□□□□ 0.18
XRCC6-206ENST00000428575 CHMP7Q8WUX9 453 aaPredicted RBP16.19■□□□□ 0.18
XRCC6-206ENST00000428575 MTUS2Q5JR59 1369 aa16.19■□□□□ 0.18
XRCC6-206ENST00000428575 ITGAEP38570 1179 aa16.19■□□□□ 0.18
XRCC6-206ENST00000428575 HECW1Q76N89 1606 aa16.17■□□□□ 0.18
XRCC6-206ENST00000428575 CCDC18Q5T9S5 1454 aa16.17■□□□□ 0.18
XRCC6-206ENST00000428575 FAM50AQ14320 339 aaKnown RBP16.16■□□□□ 0.18
XRCC6-206ENST00000428575 SUPT16HQ9Y5B9 1047 aaKnown RBP16.15■□□□□ 0.18
XRCC6-206ENST00000428575 KIAA0556O60303 1618 aa16.15■□□□□ 0.18
XRCC6-206ENST00000428575 FBLN2P98095 1184 aa16.15■□□□□ 0.18
XRCC6-206ENST00000428575 DISP1Q96F81 1524 aa16.14■□□□□ 0.17
XRCC6-206ENST00000428575 CEP170Q5SW79 1584 aa16.14■□□□□ 0.17
XRCC6-206ENST00000428575 EHBP1L1Q8N3D4 1523 aa16.14■□□□□ 0.17
XRCC6-206ENST00000428575 DHX57Q6P158 1386 aaKnown RBP16.12■□□□□ 0.17
XRCC6-206ENST00000428575 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.11■□□□□ 0.17
XRCC6-206ENST00000428575 SUPT6HQ7KZ85 1726 aaKnown RBP16.11■□□□□ 0.17
XRCC6-206ENST00000428575 EPRSP07814 1512 aaKnown RBP16.11■□□□□ 0.17
XRCC6-206ENST00000428575 FGD6Q6ZV73 1430 aa16.11■□□□□ 0.17
XRCC6-206ENST00000428575 NCOA2Q15596 1464 aa16.1■□□□□ 0.17
XRCC6-206ENST00000428575 NUP160Q12769 1436 aa16.1■□□□□ 0.17
XRCC6-206ENST00000428575 TSHZ2Q9NRE2 1034 aa16.1■□□□□ 0.17
XRCC6-206ENST00000428575 MAGI3Q5TCQ9 1506 aa16.07■□□□□ 0.16
XRCC6-206ENST00000428575 RAB3GAP2Q9H2M9 1393 aa16.07■□□□□ 0.16
XRCC6-206ENST00000428575 CDK13Q14004 1512 aaKnown RBP16.06■□□□□ 0.16
XRCC6-206ENST00000428575 MYOM3Q5VTT5 1437 aa16.06■□□□□ 0.16
XRCC6-206ENST00000428575 SETD5Q9C0A6 1442 aa16.06■□□□□ 0.16
XRCC6-206ENST00000428575 ARHGEF11O15085 1522 aa16.04■□□□□ 0.16
XRCC6-206ENST00000428575 CARMIL2Q6F5E8 1435 aa16.04■□□□□ 0.16
XRCC6-206ENST00000428575 RAPGEF6Q8TEU7 1601 aa16.03■□□□□ 0.16
XRCC6-206ENST00000428575 ARID3CA6NKF2 412 aa16.03■□□□□ 0.16
XRCC6-206ENST00000428575 JPH4Q96JJ6 628 aa16.03■□□□□ 0.16
XRCC6-206ENST00000428575 NUP153P49790 1475 aaKnown RBP16.01■□□□□ 0.15
XRCC6-206ENST00000428575 PTPN23Q9H3S7 1636 aa15.98■□□□□ 0.15
XRCC6-206ENST00000428575 CDK11AQ9UQ88 783 aaPredicted RBP15.95■□□□□ 0.14
XRCC6-206ENST00000428575 PLB1Q6P1J6 1458 aa15.95■□□□□ 0.14
XRCC6-206ENST00000428575 TCOF1Q13428 1488 aaKnown RBP15.94■□□□□ 0.14
XRCC6-206ENST00000428575 CHD1O14646 1710 aa15.94■□□□□ 0.14
XRCC6-206ENST00000428575 PTPRKQ15262 1439 aa15.94■□□□□ 0.14
XRCC6-206ENST00000428575 MIA2Q96PC5 1412 aa15.93■□□□□ 0.14
XRCC6-206ENST00000428575 MAPKBP1O60336 1514 aa15.92■□□□□ 0.14
XRCC6-206ENST00000428575 HFM1A2PYH4 1435 aa15.91■□□□□ 0.14
XRCC6-206ENST00000428575 PRG4Q92954 1404 aaPredicted RBP15.9■□□□□ 0.14
XRCC6-206ENST00000428575 TROQ12816 1431 aaPredicted RBP15.89■□□□□ 0.13
XRCC6-206ENST00000428575 ABCA8O94911 1581 aa15.88■□□□□ 0.13
XRCC6-206ENST00000428575 NAIPQ13075 1403 aa15.86■□□□□ 0.13
XRCC6-206ENST00000428575 PTPRGP23470 1445 aa15.84■□□□□ 0.13
XRCC6-206ENST00000428575 ADCY10Q96PN6 1610 aa15.83■□□□□ 0.12
XRCC6-206ENST00000428575 SHROOM2Q13796 1616 aa15.82■□□□□ 0.12
XRCC6-206ENST00000428575 CHIC2Q9UKJ5 165 aa15.82■□□□□ 0.12
XRCC6-206ENST00000428575 AKNAQ7Z591 1439 aa15.82■□□□□ 0.12
XRCC6-206ENST00000428575 UACAQ9BZF9 1416 aa15.82■□□□□ 0.12
XRCC6-206ENST00000428575 ATP10BO94823 1461 aa15.81■□□□□ 0.12
XRCC6-206ENST00000428575 RRP7BPQ9NSQ0 103 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms