RNA–Protein interactions for RNA: ENST00000428253.1

MMP11-202, Transcript of matrix metallopeptidase 11, humanhuman

TSL 4

Gene MMP11, Length 537 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-202ENST00000428253 CSRNP3Q8WYN3 585 aa29.96■■■□□ 2.39
MMP11-202ENST00000428253 SHROOM2Q13796 1616 aa29.93■■■□□ 2.38
MMP11-202ENST00000428253 KIAA0586Q9BVV6 1533 aa29.92■■■□□ 2.38
MMP11-202ENST00000428253 JPH4Q96JJ6 628 aa29.84■■■□□ 2.37
MMP11-202ENST00000428253 FAM9AQ8IZU1 332 aaPredicted RBP29.82■■■□□ 2.36
MMP11-202ENST00000428253 ARAP1Q96P48 1450 aa29.8■■■□□ 2.36
MMP11-202ENST00000428253 ERCC6L2Q5T890 1561 aa29.8■■■□□ 2.36
MMP11-202ENST00000428253 IQGAP2Q13576 1575 aa29.75■■■□□ 2.35
MMP11-202ENST00000428253 PRG4Q92954 1404 aaPredicted RBP29.75■■■□□ 2.35
MMP11-202ENST00000428253 KIF21BO75037 1637 aa29.72■■■□□ 2.35
MMP11-202ENST00000428253 CTTNBP2Q8WZ74 1663 aa29.69■■■□□ 2.34
MMP11-202ENST00000428253 CYB5RLQ6IPT4 315 aa29.68■■■□□ 2.34
MMP11-202ENST00000428253 UGGT2Q9NYU1 1516 aa29.65■■■□□ 2.34
MMP11-202ENST00000428253 DISP1Q96F81 1524 aa29.58■■■□□ 2.33
MMP11-202ENST00000428253 CARMIL2Q6F5E8 1435 aa29.54■■■□□ 2.32
MMP11-202ENST00000428253 GOLGA3Q08378 1498 aa29.52■■■□□ 2.32
MMP11-202ENST00000428253 KIAA0556O60303 1618 aa29.48■■■□□ 2.31
MMP11-202ENST00000428253 TNIKQ9UKE5 1360 aa29.46■■■□□ 2.31
MMP11-202ENST00000428253 PTPRGP23470 1445 aa29.42■■■□□ 2.3
MMP11-202ENST00000428253 UBTFP17480 764 aaKnown RBP29.37■■■□□ 2.29
MMP11-202ENST00000428253 SAMD9Q5K651 1589 aa29.37■■■□□ 2.29
MMP11-202ENST00000428253 EHMT2Q96KQ7 1210 aa29.36■■■□□ 2.29
MMP11-202ENST00000428253 ADCY10Q96PN6 1610 aa29.3■■■□□ 2.28
MMP11-202ENST00000428253 TTBK1Q5TCY1 1321 aaPredicted RBP29.24■■■□□ 2.27
MMP11-202ENST00000428253 UHRF1BP1LA0JNW5 1464 aa29.24■■■□□ 2.27
MMP11-202ENST00000428253 UACAQ9BZF9 1416 aa29.24■■■□□ 2.27
MMP11-202ENST00000428253 EFCAB5A4FU69 1503 aa29.24■■■□□ 2.27
MMP11-202ENST00000428253 P3H3Q8IVL6 736 aa29.22■■■□□ 2.27
MMP11-202ENST00000428253 RANGAP1P46060 587 aaPredicted RBP29.19■■■□□ 2.26
MMP11-202ENST00000428253 ABCC2Q92887 1545 aa29.19■■■□□ 2.26
MMP11-202ENST00000428253 ABCA8O94911 1581 aa29.18■■■□□ 2.26
MMP11-202ENST00000428253 PLB1Q6P1J6 1458 aa29.17■■■□□ 2.26
MMP11-202ENST00000428253 ARHGAP35Q9NRY4 1499 aa29.16■■■□□ 2.26
MMP11-202ENST00000428253 FHOD3Q2V2M9 1422 aa29.15■■■□□ 2.26
MMP11-202ENST00000428253 KDM5BQ9UGL1 1544 aa29.1■■■□□ 2.25
MMP11-202ENST00000428253 MAPKBP1O60336 1514 aa29.1■■■□□ 2.25
MMP11-202ENST00000428253 NPM1P06748 294 aaKnown RBP eCLIP29.08■■■□□ 2.25
MMP11-202ENST00000428253 LOC105371045A0A1W2PR82 267 aa29.06■■■□□ 2.24
MMP11-202ENST00000428253 RAPGEF6Q8TEU7 1601 aa29.02■■■□□ 2.24
MMP11-202ENST00000428253 ZCCHC11Q5TAX3 1644 aaKnown RBP29■■■□□ 2.23
MMP11-202ENST00000428253 CLIP1P30622 1438 aa29■■■□□ 2.23
MMP11-202ENST00000428253 FMN1Q68DA7 1419 aa28.95■■■□□ 2.23
MMP11-202ENST00000428253 NUP153P49790 1475 aaKnown RBP28.95■■■□□ 2.22
MMP11-202ENST00000428253 TRHP20396 242 aaPredicted RBP28.94■■■□□ 2.22
MMP11-202ENST00000428253 ASXL2Q76L83 1435 aa28.94■■■□□ 2.22
MMP11-202ENST00000428253 ATP10BO94823 1461 aa28.93■■■□□ 2.22
MMP11-202ENST00000428253 ABCC10Q5T3U5 1492 aa28.92■■■□□ 2.22
MMP11-202ENST00000428253 CEP162Q5TB80 1403 aa28.92■■■□□ 2.22
MMP11-202ENST00000428253 KIF13AQ9H1H9 1805 aa28.9■■■□□ 2.22
MMP11-202ENST00000428253 DIP2BQ9P265 1576 aa28.88■■■□□ 2.21
MMP11-202ENST00000428253 WDR7Q9Y4E6 1490 aa28.82■■■□□ 2.2
MMP11-202ENST00000428253 ARID3CA6NKF2 412 aa28.81■■■□□ 2.2
MMP11-202ENST00000428253 FAM69CQ0P6D2 419 aa28.79■■■□□ 2.2
MMP11-202ENST00000428253 GLI2P10070 1586 aa28.79■■■□□ 2.2
MMP11-202ENST00000428253 EPRSP07814 1512 aaKnown RBP28.79■■■□□ 2.2
MMP11-202ENST00000428253 HECW1Q76N89 1606 aa28.78■■■□□ 2.2
MMP11-202ENST00000428253 CASKIN1Q8WXD9 1431 aa28.77■■■□□ 2.2
MMP11-202ENST00000428253 PCF11O94913 1555 aaKnown RBP28.75■■■□□ 2.19
MMP11-202ENST00000428253 CDK13Q14004 1512 aaKnown RBP28.72■■■□□ 2.19
MMP11-202ENST00000428253 LRRIQ1Q96JM4 1722 aa28.71■■■□□ 2.19
MMP11-202ENST00000428253 FYCO1Q9BQS8 1478 aa28.71■■■□□ 2.19
MMP11-202ENST00000428253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.66■■■□□ 2.18
MMP11-202ENST00000428253 HNRNPUL2Q1KMD3 747 aaKnown RBP28.66■■■□□ 2.18
MMP11-202ENST00000428253 ATP1B4Q9UN42 357 aaPredicted RBP28.65■■■□□ 2.18
MMP11-202ENST00000428253 MAP3K4Q9Y6R4 1608 aa28.65■■■□□ 2.18
MMP11-202ENST00000428253 PLEKHD1A6NEE1 506 aa28.63■■■□□ 2.17
MMP11-202ENST00000428253 KCNH8Q96L42 1107 aa28.63■■■□□ 2.17
MMP11-202ENST00000428253 CCDC18Q5T9S5 1454 aa28.61■■■□□ 2.17
MMP11-202ENST00000428253 PPRC1Q5VV67 1664 aaKnown RBP28.59■■■□□ 2.17
MMP11-202ENST00000428253 VPS8Q8N3P4 1428 aa28.57■■■□□ 2.16
MMP11-202ENST00000428253 ABCA9Q8IUA7 1624 aa28.57■■■□□ 2.16
MMP11-202ENST00000428253 CFAP43Q8NDM7 1665 aa28.57■■■□□ 2.16
MMP11-202ENST00000428253 TSPOAP1O95153 1857 aa28.56■■■□□ 2.16
MMP11-202ENST00000428253 CDK11AQ9UQ88 783 aaPredicted RBP28.53■■■□□ 2.16
MMP11-202ENST00000428253 CD109Q6YHK3 1445 aa28.52■■■□□ 2.16
MMP11-202ENST00000428253 TROQ12816 1431 aaPredicted RBP28.52■■■□□ 2.16
MMP11-202ENST00000428253 MAGI3Q5TCQ9 1506 aa28.5■■■□□ 2.15
MMP11-202ENST00000428253 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.48■■■□□ 2.15
MMP11-202ENST00000428253 TEX14Q8IWB6 1497 aa28.44■■■□□ 2.14
MMP11-202ENST00000428253 KIF14Q15058 1648 aa28.43■■■□□ 2.14
MMP11-202ENST00000428253 TTC37Q6PGP7 1564 aa28.42■■■□□ 2.14
MMP11-202ENST00000428253 MAP3K1Q13233 1512 aa28.35■■■□□ 2.13
MMP11-202ENST00000428253 TIAM1Q13009 1591 aa28.35■■■□□ 2.13
MMP11-202ENST00000428253 COL17A1Q9UMD9 1497 aaPredicted RBP28.33■■■□□ 2.13
MMP11-202ENST00000428253 PLCH2O75038 1416 aa28.32■■■□□ 2.12
MMP11-202ENST00000428253 KDM6BO15054 1643 aa28.32■■■□□ 2.12
MMP11-202ENST00000428253 NEO1Q92859 1461 aa28.3■■■□□ 2.12
MMP11-202ENST00000428253 MTUS2Q5JR59 1369 aa28.3■■■□□ 2.12
MMP11-202ENST00000428253 EHBP1L1Q8N3D4 1523 aa28.29■■■□□ 2.12
MMP11-202ENST00000428253 ARAP3Q8WWN8 1544 aa28.29■■■□□ 2.12
MMP11-202ENST00000428253 PHLDB1Q86UU1 1377 aa28.29■■■□□ 2.12
MMP11-202ENST00000428253 MYO5CQ9NQX4 1742 aa28.27■■■□□ 2.12
MMP11-202ENST00000428253 FANCAO15360 1455 aa28.25■■■□□ 2.11
MMP11-202ENST00000428253 LRRC9Q6ZRR7 1453 aa28.24■■■□□ 2.11
MMP11-202ENST00000428253 CDC42BPBQ9Y5S2 1711 aa28.21■■■□□ 2.11
MMP11-202ENST00000428253 CFAP74Q9C0B2 1584 aa28.2■■■□□ 2.11
MMP11-202ENST00000428253 KANK4Q5T7N3 995 aaPredicted RBP28.2■■■□□ 2.1
MMP11-202ENST00000428253 PREX2Q70Z35 1606 aa28.2■■■□□ 2.1
MMP11-202ENST00000428253 CDC42BPAQ5VT25 1732 aa28.2■■■□□ 2.1
MMP11-202ENST00000428253 AKNAQ7Z591 1439 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms