RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 CYB5RLQ6IPT4 315 aa11.31□□□□□ -0.6
CDC7-203ENST00000428239 LOC105371045A0A1W2PR82 267 aa11.3□□□□□ -0.6
CDC7-203ENST00000428239 ATP1B4Q9UN42 357 aaPredicted RBP11.29□□□□□ -0.6
CDC7-203ENST00000428239 GOLGA3Q08378 1498 aa11.26□□□□□ -0.61
CDC7-203ENST00000428239 PRXQ9BXM0 1461 aa11.25□□□□□ -0.61
CDC7-203ENST00000428239 PRG4Q92954 1404 aaPredicted RBP11.24□□□□□ -0.61
CDC7-203ENST00000428239 NUP160Q12769 1436 aa11.23□□□□□ -0.61
CDC7-203ENST00000428239 CEP170Q5SW79 1584 aa11.23□□□□□ -0.61
CDC7-203ENST00000428239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.23□□□□□ -0.61
CDC7-203ENST00000428239 HNRNPUL2Q1KMD3 747 aaKnown RBP11.23□□□□□ -0.61
CDC7-203ENST00000428239 KIAA0586Q9BVV6 1533 aa11.23□□□□□ -0.61
CDC7-203ENST00000428239 CARMIL2Q6F5E8 1435 aa11.23□□□□□ -0.61
CDC7-203ENST00000428239 ARID3CA6NKF2 412 aa11.22□□□□□ -0.61
CDC7-203ENST00000428239 NPM1P06748 294 aaKnown RBP eCLIP11.2□□□□□ -0.62
CDC7-203ENST00000428239 IQGAP2Q13576 1575 aa11.18□□□□□ -0.62
CDC7-203ENST00000428239 ARHGEF11O15085 1522 aa11.18□□□□□ -0.62
CDC7-203ENST00000428239 KIF21BO75037 1637 aa11.16□□□□□ -0.62
CDC7-203ENST00000428239 PTPRGP23470 1445 aa11.16□□□□□ -0.62
CDC7-203ENST00000428239 CLASP1Q7Z460 1538 aa11.16□□□□□ -0.62
CDC7-203ENST00000428239 TRHP20396 242 aaPredicted RBP11.14□□□□□ -0.63
CDC7-203ENST00000428239 TNIKQ9UKE5 1360 aa11.12□□□□□ -0.63
CDC7-203ENST00000428239 RIMBP3CA6NJZ7 1639 aa11.12□□□□□ -0.63
CDC7-203ENST00000428239 RIMBP3BA6NNM3 1639 aa11.12□□□□□ -0.63
CDC7-203ENST00000428239 RIMBP3Q9UFD9 1639 aa11.12□□□□□ -0.63
CDC7-203ENST00000428239 ERCC6L2Q5T890 1561 aa11.11□□□□□ -0.63
CDC7-203ENST00000428239 CLIP1P30622 1438 aa11.11□□□□□ -0.63
CDC7-203ENST00000428239 FHOD3Q2V2M9 1422 aa11.11□□□□□ -0.63
CDC7-203ENST00000428239 CTTNBP2Q8WZ74 1663 aa11.1□□□□□ -0.63
CDC7-203ENST00000428239 APLP2Q06481 763 aa11.09□□□□□ -0.63
CDC7-203ENST00000428239 ARAP1Q96P48 1450 aa11.09□□□□□ -0.63
CDC7-203ENST00000428239 CEP162Q5TB80 1403 aa11.07□□□□□ -0.64
CDC7-203ENST00000428239 UGGT2Q9NYU1 1516 aa11.06□□□□□ -0.64
CDC7-203ENST00000428239 KCNH8Q96L42 1107 aa11.05□□□□□ -0.64
CDC7-203ENST00000428239 DISP1Q96F81 1524 aa11.05□□□□□ -0.64
CDC7-203ENST00000428239 KIAA0556O60303 1618 aa11.04□□□□□ -0.64
CDC7-203ENST00000428239 SHROOM2Q13796 1616 aa11.02□□□□□ -0.64
CDC7-203ENST00000428239 UACAQ9BZF9 1416 aa11.02□□□□□ -0.65
CDC7-203ENST00000428239 PLB1Q6P1J6 1458 aa11.02□□□□□ -0.65
CDC7-203ENST00000428239 FMN1Q68DA7 1419 aa11.01□□□□□ -0.65
CDC7-203ENST00000428239 ARHGAP35Q9NRY4 1499 aa11.01□□□□□ -0.65
CDC7-203ENST00000428239 EFCAB5A4FU69 1503 aa11.01□□□□□ -0.65
CDC7-203ENST00000428239 CDK11AQ9UQ88 783 aaPredicted RBP11□□□□□ -0.65
CDC7-203ENST00000428239 PLEKHD1A6NEE1 506 aa10.99□□□□□ -0.65
CDC7-203ENST00000428239 FAM69CQ0P6D2 419 aa10.97□□□□□ -0.65
CDC7-203ENST00000428239 PPARGC1BQ86YN6 1023 aaKnown RBP10.95□□□□□ -0.66
CDC7-203ENST00000428239 SAMD9Q5K651 1589 aa10.94□□□□□ -0.66
CDC7-203ENST00000428239 ABCC2Q92887 1545 aa10.93□□□□□ -0.66
CDC7-203ENST00000428239 MTUS2Q5JR59 1369 aa10.92□□□□□ -0.66
CDC7-203ENST00000428239 RAPGEF6Q8TEU7 1601 aa10.9□□□□□ -0.66
CDC7-203ENST00000428239 ASXL2Q76L83 1435 aa10.9□□□□□ -0.66
CDC7-203ENST00000428239 ADCY10Q96PN6 1610 aa10.89□□□□□ -0.67
CDC7-203ENST00000428239 VPS8Q8N3P4 1428 aa10.89□□□□□ -0.67
CDC7-203ENST00000428239 MYT1LQ9UL68 1186 aa10.89□□□□□ -0.67
CDC7-203ENST00000428239 CDK13Q14004 1512 aaKnown RBP10.88□□□□□ -0.67
CDC7-203ENST00000428239 ZNF777Q9ULD5 760 aaPredicted RBP10.88□□□□□ -0.67
CDC7-203ENST00000428239 CASKIN1Q8WXD9 1431 aa10.88□□□□□ -0.67
CDC7-203ENST00000428239 ATP10BO94823 1461 aa10.88□□□□□ -0.67
CDC7-203ENST00000428239 NUP153P49790 1475 aaKnown RBP10.88□□□□□ -0.67
CDC7-203ENST00000428239 HECW1Q76N89 1606 aa10.87□□□□□ -0.67
CDC7-203ENST00000428239 UHRF1BP1LA0JNW5 1464 aa10.87□□□□□ -0.67
CDC7-203ENST00000428239 ABCA8O94911 1581 aa10.87□□□□□ -0.67
CDC7-203ENST00000428239 PCF11O94913 1555 aaKnown RBP10.86□□□□□ -0.67
CDC7-203ENST00000428239 EPRSP07814 1512 aaKnown RBP10.85□□□□□ -0.67
CDC7-203ENST00000428239 FYCO1Q9BQS8 1478 aa10.85□□□□□ -0.67
CDC7-203ENST00000428239 KDM5BQ9UGL1 1544 aa10.84□□□□□ -0.67
CDC7-203ENST00000428239 WDR7Q9Y4E6 1490 aa10.84□□□□□ -0.67
CDC7-203ENST00000428239 ZCCHC11Q5TAX3 1644 aaKnown RBP10.83□□□□□ -0.68
CDC7-203ENST00000428239 CCDC18Q5T9S5 1454 aa10.83□□□□□ -0.68
CDC7-203ENST00000428239 KANK4Q5T7N3 995 aaPredicted RBP10.8□□□□□ -0.68
CDC7-203ENST00000428239 CD109Q6YHK3 1445 aa10.8□□□□□ -0.68
CDC7-203ENST00000428239 CFDP1Q9UEE9 299 aaPredicted RBP10.79□□□□□ -0.68
CDC7-203ENST00000428239 CCNB3Q8WWL7 1395 aa10.79□□□□□ -0.68
CDC7-203ENST00000428239 TROQ12816 1431 aaPredicted RBP10.79□□□□□ -0.68
CDC7-203ENST00000428239 ABCC10Q5T3U5 1492 aa10.78□□□□□ -0.68
CDC7-203ENST00000428239 MAPKBP1O60336 1514 aa10.78□□□□□ -0.68
CDC7-203ENST00000428239 EFCAB2Q5VUJ9 269 aa10.77□□□□□ -0.69
CDC7-203ENST00000428239 FAM50AQ14320 339 aaKnown RBP10.77□□□□□ -0.69
CDC7-203ENST00000428239 ITGAEP38570 1179 aa10.76□□□□□ -0.69
CDC7-203ENST00000428239 TSPOAP1O95153 1857 aa10.75□□□□□ -0.69
CDC7-203ENST00000428239 KIF14Q15058 1648 aa10.73□□□□□ -0.69
CDC7-203ENST00000428239 DIP2BQ9P265 1576 aa10.72□□□□□ -0.69
CDC7-203ENST00000428239 ARHGAP5Q13017 1502 aa10.72□□□□□ -0.69
CDC7-203ENST00000428239 TIAM1Q13009 1591 aa10.72□□□□□ -0.69
CDC7-203ENST00000428239 LRRC9Q6ZRR7 1453 aa10.71□□□□□ -0.69
CDC7-203ENST00000428239 TEX14Q8IWB6 1497 aa10.71□□□□□ -0.7
CDC7-203ENST00000428239 RAPGEF3O95398 923 aa10.71□□□□□ -0.7
CDC7-203ENST00000428239 EHBP1L1Q8N3D4 1523 aa10.7□□□□□ -0.7
CDC7-203ENST00000428239 HNRNPMP52272 730 aaKnown RBP eCLIP10.69□□□□□ -0.71e-8■■■□□ 18.9
CDC7-203ENST00000428239 NCOA2Q15596 1464 aa10.69□□□□□ -0.7
CDC7-203ENST00000428239 FANCAO15360 1455 aa10.69□□□□□ -0.7
CDC7-203ENST00000428239 ARID4BQ4LE39 1312 aaPredicted RBP10.69□□□□□ -0.7
CDC7-203ENST00000428239 MAGI3Q5TCQ9 1506 aa10.68□□□□□ -0.7
CDC7-203ENST00000428239 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.68□□□□□ -0.7
CDC7-203ENST00000428239 ZNF644Q9H582 1327 aaPredicted RBP10.67□□□□□ -0.7
CDC7-203ENST00000428239 TSPY4P0CV99 314 aa10.67□□□□□ -0.7
CDC7-203ENST00000428239 TSPY10P0CW01 314 aa10.67□□□□□ -0.7
CDC7-203ENST00000428239 AFAP1Q8N556 730 aa10.66□□□□□ -0.7
CDC7-203ENST00000428239 PLCH2O75038 1416 aa10.66□□□□□ -0.7
CDC7-203ENST00000428239 SCAPERQ9BY12 1400 aa10.66□□□□□ -0.7
CDC7-203ENST00000428239 LRRIQ1Q96JM4 1722 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms