RNA–Protein interactions for RNA: ENST00000428134.1

LINC02088-201, Transcript of long intergenic non-protein coding RNA 2088, humanhuman

TSL 3 BASIC

Gene LINC02088, Length 620 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02088-201ENST00000428134 ARHGEF11O15085 1522 aa13.77□□□□□ -0.21
LINC02088-201ENST00000428134 CEP170Q5SW79 1584 aa13.75□□□□□ -0.21
LINC02088-201ENST00000428134 GOLGA3Q08378 1498 aa13.72□□□□□ -0.21
LINC02088-201ENST00000428134 CLASP1Q7Z460 1538 aa13.71□□□□□ -0.21
LINC02088-201ENST00000428134 KIAA0586Q9BVV6 1533 aa13.69□□□□□ -0.22
LINC02088-201ENST00000428134 LOC105371045A0A1W2PR82 267 aa13.69□□□□□ -0.22
LINC02088-201ENST00000428134 EHMT2Q96KQ7 1210 aa13.66□□□□□ -0.22
LINC02088-201ENST00000428134 TNIKQ9UKE5 1360 aa13.64□□□□□ -0.23
LINC02088-201ENST00000428134 JPH4Q96JJ6 628 aa13.64□□□□□ -0.23
LINC02088-201ENST00000428134 UBTFP17480 764 aaKnown RBP13.63□□□□□ -0.23
LINC02088-201ENST00000428134 IQGAP2Q13576 1575 aa13.62□□□□□ -0.23
LINC02088-201ENST00000428134 SHROOM2Q13796 1616 aa13.62□□□□□ -0.23
LINC02088-201ENST00000428134 ARAP1Q96P48 1450 aa13.61□□□□□ -0.23
LINC02088-201ENST00000428134 CTTNBP2Q8WZ74 1663 aa13.61□□□□□ -0.23
LINC02088-201ENST00000428134 UGGT2Q9NYU1 1516 aa13.6□□□□□ -0.23
LINC02088-201ENST00000428134 CYB5RLQ6IPT4 315 aa13.58□□□□□ -0.24
LINC02088-201ENST00000428134 DISP1Q96F81 1524 aa13.57□□□□□ -0.24
LINC02088-201ENST00000428134 PRG4Q92954 1404 aaPredicted RBP13.56□□□□□ -0.24
LINC02088-201ENST00000428134 ERCC6L2Q5T890 1561 aa13.55□□□□□ -0.24
LINC02088-201ENST00000428134 TRHP20396 242 aaPredicted RBP13.54□□□□□ -0.24
LINC02088-201ENST00000428134 SAMD9Q5K651 1589 aa13.53□□□□□ -0.24
LINC02088-201ENST00000428134 ARHGAP35Q9NRY4 1499 aa13.51□□□□□ -0.25
LINC02088-201ENST00000428134 CEP162Q5TB80 1403 aa13.5□□□□□ -0.25
LINC02088-201ENST00000428134 KIAA0556O60303 1618 aa13.5□□□□□ -0.25
LINC02088-201ENST00000428134 CLIP1P30622 1438 aa13.49□□□□□ -0.25
LINC02088-201ENST00000428134 CARMIL2Q6F5E8 1435 aa13.49□□□□□ -0.25
LINC02088-201ENST00000428134 EFCAB5A4FU69 1503 aa13.49□□□□□ -0.25
LINC02088-201ENST00000428134 RANGAP1P46060 587 aaPredicted RBP13.48□□□□□ -0.25
LINC02088-201ENST00000428134 P3H3Q8IVL6 736 aa13.46□□□□□ -0.25
LINC02088-201ENST00000428134 FHOD3Q2V2M9 1422 aa13.45□□□□□ -0.26
LINC02088-201ENST00000428134 PTPRGP23470 1445 aa13.44□□□□□ -0.26
LINC02088-201ENST00000428134 ABCA8O94911 1581 aa13.37□□□□□ -0.27
LINC02088-201ENST00000428134 PLB1Q6P1J6 1458 aa13.36□□□□□ -0.27
LINC02088-201ENST00000428134 FMN1Q68DA7 1419 aa13.36□□□□□ -0.27
LINC02088-201ENST00000428134 UACAQ9BZF9 1416 aa13.36□□□□□ -0.27
LINC02088-201ENST00000428134 TTBK1Q5TCY1 1321 aaPredicted RBP13.36□□□□□ -0.27
LINC02088-201ENST00000428134 UHRF1BP1LA0JNW5 1464 aa13.36□□□□□ -0.27
LINC02088-201ENST00000428134 AEBP2Q6ZN18 517 aaPredicted RBP13.33□□□□□ -0.28
LINC02088-201ENST00000428134 VPS8Q8N3P4 1428 aa13.32□□□□□ -0.28
LINC02088-201ENST00000428134 CASKIN1Q8WXD9 1431 aa13.32□□□□□ -0.28
LINC02088-201ENST00000428134 ABCC2Q92887 1545 aa13.32□□□□□ -0.28
LINC02088-201ENST00000428134 ADCY10Q96PN6 1610 aa13.31□□□□□ -0.28
LINC02088-201ENST00000428134 NUP153P49790 1475 aaKnown RBP13.3□□□□□ -0.28
LINC02088-201ENST00000428134 RAPGEF6Q8TEU7 1601 aa13.3□□□□□ -0.28
LINC02088-201ENST00000428134 KDM5BQ9UGL1 1544 aa13.29□□□□□ -0.28
LINC02088-201ENST00000428134 PCF11O94913 1555 aaKnown RBP13.28□□□□□ -0.28
LINC02088-201ENST00000428134 ATP10BO94823 1461 aa13.28□□□□□ -0.28
LINC02088-201ENST00000428134 FYCO1Q9BQS8 1478 aa13.28□□□□□ -0.28
LINC02088-201ENST00000428134 EPRSP07814 1512 aaKnown RBP13.24□□□□□ -0.29
LINC02088-201ENST00000428134 HECW1Q76N89 1606 aa13.24□□□□□ -0.29
LINC02088-201ENST00000428134 KIF13AQ9H1H9 1805 aa13.23□□□□□ -0.29
LINC02088-201ENST00000428134 LRRIQ1Q96JM4 1722 aa13.22□□□□□ -0.29
LINC02088-201ENST00000428134 CDK13Q14004 1512 aaKnown RBP13.22□□□□□ -0.29
LINC02088-201ENST00000428134 ZCCHC11Q5TAX3 1644 aaKnown RBP13.21□□□□□ -0.29
LINC02088-201ENST00000428134 ARID3CA6NKF2 412 aa13.21□□□□□ -0.29
LINC02088-201ENST00000428134 ATP1B4Q9UN42 357 aaPredicted RBP13.21□□□□□ -0.29
LINC02088-201ENST00000428134 MAP3K1Q13233 1512 aa13.19□□□□□ -0.3
LINC02088-201ENST00000428134 CCDC18Q5T9S5 1454 aa13.19□□□□□ -0.3
LINC02088-201ENST00000428134 NPM1P06748 294 aaKnown RBP eCLIP13.18□□□□□ -0.3
LINC02088-201ENST00000428134 MAPKBP1O60336 1514 aa13.18□□□□□ -0.3
LINC02088-201ENST00000428134 ASXL2Q76L83 1435 aa13.17□□□□□ -0.3
LINC02088-201ENST00000428134 MAGI3Q5TCQ9 1506 aa13.16□□□□□ -0.3
LINC02088-201ENST00000428134 TIAM1Q13009 1591 aa13.15□□□□□ -0.3
LINC02088-201ENST00000428134 PLEKHD1A6NEE1 506 aa13.14□□□□□ -0.31
LINC02088-201ENST00000428134 KANK4Q5T7N3 995 aaPredicted RBP13.14□□□□□ -0.31
LINC02088-201ENST00000428134 WDR7Q9Y4E6 1490 aa13.14□□□□□ -0.31
LINC02088-201ENST00000428134 CFAP43Q8NDM7 1665 aa13.13□□□□□ -0.31
LINC02088-201ENST00000428134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.13□□□□□ -0.31
LINC02088-201ENST00000428134 HNRNPUL2Q1KMD3 747 aaKnown RBP13.13□□□□□ -0.31
LINC02088-201ENST00000428134 TROQ12816 1431 aaPredicted RBP13.13□□□□□ -0.31
LINC02088-201ENST00000428134 CDK11AQ9UQ88 783 aaPredicted RBP13.12□□□□□ -0.31
LINC02088-201ENST00000428134 LRRC9Q6ZRR7 1453 aa13.11□□□□□ -0.31
LINC02088-201ENST00000428134 ABCC10Q5T3U5 1492 aa13.1□□□□□ -0.31
LINC02088-201ENST00000428134 APLP2Q06481 763 aa13.08□□□□□ -0.32
LINC02088-201ENST00000428134 MTUS2Q5JR59 1369 aa13.07□□□□□ -0.32
LINC02088-201ENST00000428134 KCNH8Q96L42 1107 aa13.07□□□□□ -0.32
LINC02088-201ENST00000428134 EHBP1L1Q8N3D4 1523 aa13.07□□□□□ -0.32
LINC02088-201ENST00000428134 GLI2P10070 1586 aa13.07□□□□□ -0.32
LINC02088-201ENST00000428134 DIP2BQ9P265 1576 aa13.06□□□□□ -0.32
LINC02088-201ENST00000428134 KIF14Q15058 1648 aa13.06□□□□□ -0.32
LINC02088-201ENST00000428134 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.04□□□□□ -0.32
LINC02088-201ENST00000428134 FAM69CQ0P6D2 419 aa13.03□□□□□ -0.32
LINC02088-201ENST00000428134 ABCA9Q8IUA7 1624 aa13.02□□□□□ -0.32
LINC02088-201ENST00000428134 TSPOAP1O95153 1857 aa13.02□□□□□ -0.32
LINC02088-201ENST00000428134 NCOA2Q15596 1464 aa13.02□□□□□ -0.33
LINC02088-201ENST00000428134 PPARGC1BQ86YN6 1023 aaKnown RBP13.01□□□□□ -0.33
LINC02088-201ENST00000428134 TTC37Q6PGP7 1564 aa13.01□□□□□ -0.33
LINC02088-201ENST00000428134 GPATCH8Q9UKJ3 1502 aaKnown RBP13□□□□□ -0.33
LINC02088-201ENST00000428134 KDM6BO15054 1643 aa12.99□□□□□ -0.33
LINC02088-201ENST00000428134 MAP3K4Q9Y6R4 1608 aa12.99□□□□□ -0.33
LINC02088-201ENST00000428134 CD109Q6YHK3 1445 aa12.99□□□□□ -0.33
LINC02088-201ENST00000428134 PHLDB1Q86UU1 1377 aa12.99□□□□□ -0.33
LINC02088-201ENST00000428134 SUPT6HQ7KZ85 1726 aaKnown RBP12.99□□□□□ -0.33
LINC02088-201ENST00000428134 PLCH2O75038 1416 aa12.98□□□□□ -0.33
LINC02088-201ENST00000428134 CCNB3Q8WWL7 1395 aa12.96□□□□□ -0.33
LINC02088-201ENST00000428134 ARAP3Q8WWN8 1544 aa12.96□□□□□ -0.33
LINC02088-201ENST00000428134 PPRC1Q5VV67 1664 aaKnown RBP12.95□□□□□ -0.34
LINC02088-201ENST00000428134 MYOM3Q5VTT5 1437 aa12.95□□□□□ -0.34
LINC02088-201ENST00000428134 CDC42BPAQ5VT25 1732 aa12.94□□□□□ -0.34
LINC02088-201ENST00000428134 CDC42BPBQ9Y5S2 1711 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms