RNA–Protein interactions for RNA: ENST00000427746.1

HLCS-204, Transcript of holocarboxylase synthetase, humanhuman

TSL 3

Gene HLCS, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-204ENST00000427746 PRG4Q92954 1404 aaPredicted RBP33.27■■■□□ 2.92
HLCS-204ENST00000427746 CARMIL1Q5VZK9 1371 aa33.25■■■□□ 2.91
HLCS-204ENST00000427746 KIAA0586Q9BVV6 1533 aa33.22■■■□□ 2.91
HLCS-204ENST00000427746 TRHP20396 242 aaPredicted RBP33.2■■■□□ 2.91
HLCS-204ENST00000427746 RAPGEF2Q9Y4G8 1499 aa33.01■■■□□ 2.88
HLCS-204ENST00000427746 IQGAP2Q13576 1575 aa32.95■■■□□ 2.86
HLCS-204ENST00000427746 CARMIL2Q6F5E8 1435 aa32.85■■■□□ 2.85
HLCS-204ENST00000427746 ADCY10Q96PN6 1610 aa32.84■■■□□ 2.85
HLCS-204ENST00000427746 PRXQ9BXM0 1461 aa32.82■■■□□ 2.84
HLCS-204ENST00000427746 PTPRGP23470 1445 aa32.8■■■□□ 2.84
HLCS-204ENST00000427746 DISP1Q96F81 1524 aa32.79■■■□□ 2.84
HLCS-204ENST00000427746 TNIKQ9UKE5 1360 aa32.79■■■□□ 2.84
HLCS-204ENST00000427746 UGGT2Q9NYU1 1516 aa32.78■■■□□ 2.84
HLCS-204ENST00000427746 MAPKBP1O60336 1514 aa32.73■■■□□ 2.83
HLCS-204ENST00000427746 NPM1P06748 294 aaKnown RBP eCLIP32.73■■■□□ 2.83
HLCS-204ENST00000427746 CTTNBP2Q8WZ74 1663 aa32.7■■■□□ 2.83
HLCS-204ENST00000427746 KIF13AQ9H1H9 1805 aa32.68■■■□□ 2.82
HLCS-204ENST00000427746 TTBK1Q5TCY1 1321 aaPredicted RBP32.66■■■□□ 2.82
HLCS-204ENST00000427746 KIAA0556O60303 1618 aa32.66■■■□□ 2.82
HLCS-204ENST00000427746 ABCC10Q5T3U5 1492 aa32.63■■■□□ 2.81
HLCS-204ENST00000427746 CSRNP3Q8WYN3 585 aa32.63■■■□□ 2.81
HLCS-204ENST00000427746 UHRF1BP1LA0JNW5 1464 aa32.61■■■□□ 2.81
HLCS-204ENST00000427746 EEA1Q15075 1411 aa32.6■■■□□ 2.81
HLCS-204ENST00000427746 ABCC2Q92887 1545 aa32.59■■■□□ 2.81
HLCS-204ENST00000427746 UACAQ9BZF9 1416 aa32.58■■■□□ 2.81
HLCS-204ENST00000427746 DIP2BQ9P265 1576 aa32.57■■■□□ 2.8
HLCS-204ENST00000427746 FAM69CQ0P6D2 419 aa32.54■■■□□ 2.8
HLCS-204ENST00000427746 GOLGA3Q08378 1498 aa32.53■■■□□ 2.8
HLCS-204ENST00000427746 KDM5BQ9UGL1 1544 aa32.45■■■□□ 2.78
HLCS-204ENST00000427746 CHIC1Q5VXU3 224 aa32.43■■■□□ 2.78
HLCS-204ENST00000427746 ASXL2Q76L83 1435 aa32.43■■■□□ 2.78
HLCS-204ENST00000427746 PLB1Q6P1J6 1458 aa32.4■■■□□ 2.78
HLCS-204ENST00000427746 FAM9AQ8IZU1 332 aaPredicted RBP32.37■■■□□ 2.77
HLCS-204ENST00000427746 ZCCHC11Q5TAX3 1644 aaKnown RBP32.35■■■□□ 2.77
HLCS-204ENST00000427746 ABCA8O94911 1581 aa32.35■■■□□ 2.77
HLCS-204ENST00000427746 GLI2P10070 1586 aa32.31■■■□□ 2.76
HLCS-204ENST00000427746 SAMD9Q5K651 1589 aa32.31■■■□□ 2.76
HLCS-204ENST00000427746 KIF21BO75037 1637 aa32.3■■■□□ 2.76
HLCS-204ENST00000427746 P3H3Q8IVL6 736 aa32.24■■■□□ 2.75
HLCS-204ENST00000427746 TSPOAP1O95153 1857 aa32.24■■■□□ 2.75
HLCS-204ENST00000427746 EPRSP07814 1512 aaKnown RBP32.24■■■□□ 2.75
HLCS-204ENST00000427746 WDR7Q9Y4E6 1490 aa32.18■■■□□ 2.74
HLCS-204ENST00000427746 PPRC1Q5VV67 1664 aaKnown RBP32.17■■■□□ 2.74
HLCS-204ENST00000427746 KDM6BO15054 1643 aa32.14■■■□□ 2.74
HLCS-204ENST00000427746 MAP3K4Q9Y6R4 1608 aa32.14■■■□□ 2.74
HLCS-204ENST00000427746 RANGAP1P46060 587 aaPredicted RBP32.08■■■□□ 2.73
HLCS-204ENST00000427746 ATP10BO94823 1461 aa32.07■■■□□ 2.72
HLCS-204ENST00000427746 RAPGEF6Q8TEU7 1601 aa32.06■■■□□ 2.72
HLCS-204ENST00000427746 FHOD3Q2V2M9 1422 aa32.06■■■□□ 2.72
HLCS-204ENST00000427746 EFCAB5A4FU69 1503 aa32.05■■■□□ 2.72
HLCS-204ENST00000427746 ARID3CA6NKF2 412 aa32■■■□□ 2.71
HLCS-204ENST00000427746 TEX14Q8IWB6 1497 aa31.98■■■□□ 2.71
HLCS-204ENST00000427746 UBTFP17480 764 aaKnown RBP31.98■■■□□ 2.71
HLCS-204ENST00000427746 KCNH8Q96L42 1107 aa31.98■■■□□ 2.71
HLCS-204ENST00000427746 EHMT2Q96KQ7 1210 aa31.97■■■□□ 2.71
HLCS-204ENST00000427746 NUP153P49790 1475 aaKnown RBP31.97■■■□□ 2.71
HLCS-204ENST00000427746 CFAP43Q8NDM7 1665 aa31.95■■■□□ 2.7
HLCS-204ENST00000427746 CD109Q6YHK3 1445 aa31.92■■■□□ 2.7
HLCS-204ENST00000427746 COL17A1Q9UMD9 1497 aaPredicted RBP31.92■■■□□ 2.7
HLCS-204ENST00000427746 MAGI3Q5TCQ9 1506 aa31.91■■■□□ 2.7
HLCS-204ENST00000427746 AEBP2Q6ZN18 517 aaPredicted RBP31.84■■■□□ 2.69
HLCS-204ENST00000427746 ARHGAP35Q9NRY4 1499 aa31.84■■■□□ 2.69
HLCS-204ENST00000427746 ABCA9Q8IUA7 1624 aa31.82■■■□□ 2.68
HLCS-204ENST00000427746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.81■■■□□ 2.68
HLCS-204ENST00000427746 HNRNPUL2Q1KMD3 747 aaKnown RBP31.81■■■□□ 2.68
HLCS-204ENST00000427746 FMN1Q68DA7 1419 aa31.75■■■□□ 2.67
HLCS-204ENST00000427746 PLEKHD1A6NEE1 506 aa31.7■■■□□ 2.67
HLCS-204ENST00000427746 CDK13Q14004 1512 aaKnown RBP31.67■■■□□ 2.66
HLCS-204ENST00000427746 ARAP3Q8WWN8 1544 aa31.66■■■□□ 2.66
HLCS-204ENST00000427746 HECW1Q76N89 1606 aa31.64■■■□□ 2.66
HLCS-204ENST00000427746 KDM4FA0A1W2PPD8 638 aa31.64■■■□□ 2.66
HLCS-204ENST00000427746 PHLDB1Q86UU1 1377 aa31.63■■■□□ 2.65
HLCS-204ENST00000427746 NEO1Q92859 1461 aa31.59■■■□□ 2.65
HLCS-204ENST00000427746 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.58■■■□□ 2.65
HLCS-204ENST00000427746 ATP1B4Q9UN42 357 aaPredicted RBP31.56■■■□□ 2.64
HLCS-204ENST00000427746 TTC37Q6PGP7 1564 aa31.53■■■□□ 2.64
HLCS-204ENST00000427746 ADGRL1O94910 1474 aa31.49■■■□□ 2.63
HLCS-204ENST00000427746 LRRIQ1Q96JM4 1722 aa31.49■■■□□ 2.63
HLCS-204ENST00000427746 CLIP1P30622 1438 aa31.47■■■□□ 2.63
HLCS-204ENST00000427746 CASKIN1Q8WXD9 1431 aa31.47■■■□□ 2.63
HLCS-204ENST00000427746 CDK11AQ9UQ88 783 aaPredicted RBP31.46■■■□□ 2.63
HLCS-204ENST00000427746 PCF11O94913 1555 aaKnown RBP31.46■■■□□ 2.63
HLCS-204ENST00000427746 FANCAO15360 1455 aa31.45■■■□□ 2.62
HLCS-204ENST00000427746 RAPGEF3O95398 923 aa31.44■■■□□ 2.62
HLCS-204ENST00000427746 FRMPD1Q5SYB0 1578 aa31.43■■■□□ 2.62
HLCS-204ENST00000427746 CFAP74Q9C0B2 1584 aa31.42■■■□□ 2.62
HLCS-204ENST00000427746 TROQ12816 1431 aaPredicted RBP31.41■■■□□ 2.62
HLCS-204ENST00000427746 AKNAQ7Z591 1439 aa31.41■■■□□ 2.62
HLCS-204ENST00000427746 PLCH2O75038 1416 aa31.4■■■□□ 2.62
HLCS-204ENST00000427746 CCDC18Q5T9S5 1454 aa31.38■■■□□ 2.61
HLCS-204ENST00000427746 KIF14Q15058 1648 aa31.38■■■□□ 2.61
HLCS-204ENST00000427746 FYCO1Q9BQS8 1478 aa31.37■■■□□ 2.61
HLCS-204ENST00000427746 DENND4BO75064 1496 aaPredicted RBP31.35■■■□□ 2.61
HLCS-204ENST00000427746 RICTORQ6R327 1708 aa31.33■■■□□ 2.61
HLCS-204ENST00000427746 MYO5CQ9NQX4 1742 aa31.31■■■□□ 2.6
HLCS-204ENST00000427746 EFCAB2Q5VUJ9 269 aa31.24■■■□□ 2.59
HLCS-204ENST00000427746 ZMYM4Q5VZL5 1548 aa31.24■■■□□ 2.59
HLCS-204ENST00000427746 CEP162Q5TB80 1403 aa31.23■■■□□ 2.59
HLCS-204ENST00000427746 SCAPERQ9BY12 1400 aa31.23■■■□□ 2.59
HLCS-204ENST00000427746 ARHGEF40Q8TER5 1519 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms