RNA–Protein interactions for RNA: ENST00000427678.1

KDM3A-204, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-204ENST00000427678 RIMBP3Q9UFD9 1639 aa24.83■■□□□ 1.56
KDM3A-204ENST00000427678 EEA1Q15075 1411 aa24.82■■□□□ 1.56
KDM3A-204ENST00000427678 FAM9AQ8IZU1 332 aaPredicted RBP24.81■■□□□ 1.56
KDM3A-204ENST00000427678 KIAA0586Q9BVV6 1533 aa24.79■■□□□ 1.56
KDM3A-204ENST00000427678 PRXQ9BXM0 1461 aa24.76■■□□□ 1.55
KDM3A-204ENST00000427678 PRG4Q92954 1404 aaPredicted RBP24.72■■□□□ 1.55
KDM3A-204ENST00000427678 ARAP1Q96P48 1450 aa24.7■■□□□ 1.54
KDM3A-204ENST00000427678 SHROOM2Q13796 1616 aa24.66■■□□□ 1.54
KDM3A-204ENST00000427678 ERCC6L2Q5T890 1561 aa24.61■■□□□ 1.53
KDM3A-204ENST00000427678 IQGAP2Q13576 1575 aa24.57■■□□□ 1.52
KDM3A-204ENST00000427678 CARMIL2Q6F5E8 1435 aa24.56■■□□□ 1.52
KDM3A-204ENST00000427678 PTPRGP23470 1445 aa24.48■■□□□ 1.51
KDM3A-204ENST00000427678 UGGT2Q9NYU1 1516 aa24.47■■□□□ 1.51
KDM3A-204ENST00000427678 TNIKQ9UKE5 1360 aa24.47■■□□□ 1.51
KDM3A-204ENST00000427678 TTBK1Q5TCY1 1321 aaPredicted RBP24.47■■□□□ 1.51
KDM3A-204ENST00000427678 UBTFP17480 764 aaKnown RBP24.47■■□□□ 1.51
KDM3A-204ENST00000427678 EHMT2Q96KQ7 1210 aa24.47■■□□□ 1.51
KDM3A-204ENST00000427678 KIF21BO75037 1637 aa24.43■■□□□ 1.5
KDM3A-204ENST00000427678 DISP1Q96F81 1524 aa24.43■■□□□ 1.5
KDM3A-204ENST00000427678 GOLGA3Q08378 1498 aa24.41■■□□□ 1.5
KDM3A-204ENST00000427678 CTTNBP2Q8WZ74 1663 aa24.39■■□□□ 1.49
KDM3A-204ENST00000427678 NPM1P06748 294 aaKnown RBP eCLIP24.38■■□□□ 1.49
KDM3A-204ENST00000427678 RANGAP1P46060 587 aaPredicted RBP24.38■■□□□ 1.49
KDM3A-204ENST00000427678 P3H3Q8IVL6 736 aa24.34■■□□□ 1.49
KDM3A-204ENST00000427678 TRHP20396 242 aaPredicted RBP24.31■■□□□ 1.48
KDM3A-204ENST00000427678 KIAA0556O60303 1618 aa24.31■■□□□ 1.48
KDM3A-204ENST00000427678 UACAQ9BZF9 1416 aa24.27■■□□□ 1.48
KDM3A-204ENST00000427678 UHRF1BP1LA0JNW5 1464 aa24.21■■□□□ 1.47
KDM3A-204ENST00000427678 ADCY10Q96PN6 1610 aa24.19■■□□□ 1.46
KDM3A-204ENST00000427678 SAMD9Q5K651 1589 aa24.16■■□□□ 1.46
KDM3A-204ENST00000427678 ABCC2Q92887 1545 aa24.16■■□□□ 1.46
KDM3A-204ENST00000427678 PLB1Q6P1J6 1458 aa24.15■■□□□ 1.46
KDM3A-204ENST00000427678 EFCAB5A4FU69 1503 aa24.13■■□□□ 1.45
KDM3A-204ENST00000427678 FHOD3Q2V2M9 1422 aa24.12■■□□□ 1.45
KDM3A-204ENST00000427678 KDM5BQ9UGL1 1544 aa24.08■■□□□ 1.45
KDM3A-204ENST00000427678 MAPKBP1O60336 1514 aa24.07■■□□□ 1.44
KDM3A-204ENST00000427678 LOC105371045A0A1W2PR82 267 aa24.07■■□□□ 1.44
KDM3A-204ENST00000427678 FAM69CQ0P6D2 419 aa24.07■■□□□ 1.44
KDM3A-204ENST00000427678 ABCA8O94911 1581 aa24.07■■□□□ 1.44
KDM3A-204ENST00000427678 ARHGAP35Q9NRY4 1499 aa24.05■■□□□ 1.44
KDM3A-204ENST00000427678 ASXL2Q76L83 1435 aa24.03■■□□□ 1.44
KDM3A-204ENST00000427678 ARID3CA6NKF2 412 aa24.03■■□□□ 1.44
KDM3A-204ENST00000427678 ABCC10Q5T3U5 1492 aa24■■□□□ 1.43
KDM3A-204ENST00000427678 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24■■□□□ 1.43
KDM3A-204ENST00000427678 HNRNPUL2Q1KMD3 747 aaKnown RBP24■■□□□ 1.43
KDM3A-204ENST00000427678 FMN1Q68DA7 1419 aa24■■□□□ 1.43
KDM3A-204ENST00000427678 CLIP1P30622 1438 aa23.99■■□□□ 1.43
KDM3A-204ENST00000427678 ATP1B4Q9UN42 357 aaPredicted RBP23.97■■□□□ 1.43
KDM3A-204ENST00000427678 ATP10BO94823 1461 aa23.96■■□□□ 1.43
KDM3A-204ENST00000427678 ZCCHC11Q5TAX3 1644 aaKnown RBP23.93■■□□□ 1.42
KDM3A-204ENST00000427678 RAPGEF6Q8TEU7 1601 aa23.93■■□□□ 1.42
KDM3A-204ENST00000427678 KCNH8Q96L42 1107 aa23.93■■□□□ 1.42
KDM3A-204ENST00000427678 NUP153P49790 1475 aaKnown RBP23.92■■□□□ 1.42
KDM3A-204ENST00000427678 WDR7Q9Y4E6 1490 aa23.89■■□□□ 1.42
KDM3A-204ENST00000427678 PLEKHD1A6NEE1 506 aa23.89■■□□□ 1.41
KDM3A-204ENST00000427678 CEP162Q5TB80 1403 aa23.87■■□□□ 1.41
KDM3A-204ENST00000427678 DIP2BQ9P265 1576 aa23.86■■□□□ 1.41
KDM3A-204ENST00000427678 EPRSP07814 1512 aaKnown RBP23.85■■□□□ 1.41
KDM3A-204ENST00000427678 CDK11AQ9UQ88 783 aaPredicted RBP23.83■■□□□ 1.41
KDM3A-204ENST00000427678 GLI2P10070 1586 aa23.81■■□□□ 1.4
KDM3A-204ENST00000427678 KIF13AQ9H1H9 1805 aa23.8■■□□□ 1.4
KDM3A-204ENST00000427678 CASKIN1Q8WXD9 1431 aa23.8■■□□□ 1.4
KDM3A-204ENST00000427678 HECW1Q76N89 1606 aa23.75■■□□□ 1.39
KDM3A-204ENST00000427678 CD109Q6YHK3 1445 aa23.72■■□□□ 1.39
KDM3A-204ENST00000427678 CDK13Q14004 1512 aaKnown RBP23.72■■□□□ 1.39
KDM3A-204ENST00000427678 FYCO1Q9BQS8 1478 aa23.69■■□□□ 1.38
KDM3A-204ENST00000427678 CCDC18Q5T9S5 1454 aa23.66■■□□□ 1.38
KDM3A-204ENST00000427678 PCF11O94913 1555 aaKnown RBP23.65■■□□□ 1.38
KDM3A-204ENST00000427678 TEX14Q8IWB6 1497 aa23.64■■□□□ 1.38
KDM3A-204ENST00000427678 MAP3K4Q9Y6R4 1608 aa23.63■■□□□ 1.37
KDM3A-204ENST00000427678 MAGI3Q5TCQ9 1506 aa23.62■■□□□ 1.37
KDM3A-204ENST00000427678 TSPOAP1O95153 1857 aa23.62■■□□□ 1.37
KDM3A-204ENST00000427678 TROQ12816 1431 aaPredicted RBP23.61■■□□□ 1.37
KDM3A-204ENST00000427678 VPS8Q8N3P4 1428 aa23.59■■□□□ 1.37
KDM3A-204ENST00000427678 CFAP43Q8NDM7 1665 aa23.57■■□□□ 1.36
KDM3A-204ENST00000427678 ABCA9Q8IUA7 1624 aa23.57■■□□□ 1.36
KDM3A-204ENST00000427678 PHLDB1Q86UU1 1377 aa23.54■■□□□ 1.36
KDM3A-204ENST00000427678 PPRC1Q5VV67 1664 aaKnown RBP23.53■■□□□ 1.36
KDM3A-204ENST00000427678 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.53■■□□□ 1.361e-7■■□□□ 13.1
KDM3A-204ENST00000427678 MTUS2Q5JR59 1369 aa23.51■■□□□ 1.35
KDM3A-204ENST00000427678 LRRIQ1Q96JM4 1722 aa23.5■■□□□ 1.35
KDM3A-204ENST00000427678 PLCH2O75038 1416 aa23.49■■□□□ 1.35
KDM3A-204ENST00000427678 KDM6BO15054 1643 aa23.48■■□□□ 1.35
KDM3A-204ENST00000427678 APLP2Q06481 763 aa23.48■■□□□ 1.35
KDM3A-204ENST00000427678 EFCAB2Q5VUJ9 269 aa23.48■■□□□ 1.35
KDM3A-204ENST00000427678 COL17A1Q9UMD9 1497 aaPredicted RBP23.48■■□□□ 1.35
KDM3A-204ENST00000427678 NEO1Q92859 1461 aa23.47■■□□□ 1.35
KDM3A-204ENST00000427678 KIF14Q15058 1648 aa23.45■■□□□ 1.34
KDM3A-204ENST00000427678 TTC37Q6PGP7 1564 aa23.44■■□□□ 1.34
KDM3A-204ENST00000427678 FANCAO15360 1455 aa23.43■■□□□ 1.34
KDM3A-204ENST00000427678 ARAP3Q8WWN8 1544 aa23.42■■□□□ 1.34
KDM3A-204ENST00000427678 AKNAQ7Z591 1439 aa23.42■■□□□ 1.34
KDM3A-204ENST00000427678 RAPGEF3O95398 923 aa23.39■■□□□ 1.33
KDM3A-204ENST00000427678 CCNB3Q8WWL7 1395 aa23.37■■□□□ 1.33
KDM3A-204ENST00000427678 MAP3K1Q13233 1512 aa23.36■■□□□ 1.33
KDM3A-204ENST00000427678 KANK4Q5T7N3 995 aaPredicted RBP23.35■■□□□ 1.33
KDM3A-204ENST00000427678 CFDP1Q9UEE9 299 aaPredicted RBP23.35■■□□□ 1.33
KDM3A-204ENST00000427678 TIAM1Q13009 1591 aa23.35■■□□□ 1.33
KDM3A-204ENST00000427678 EHBP1L1Q8N3D4 1523 aa23.33■■□□□ 1.33
KDM3A-204ENST00000427678 ARHGAP5Q13017 1502 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms