RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 JPH4Q96JJ6 628 aa32.91■■■□□ 2.86
COL9A2-204ENST00000427563 PRG4Q92954 1404 aaPredicted RBP32.9■■■□□ 2.86
COL9A2-204ENST00000427563 KIAA0586Q9BVV6 1533 aa32.87■■■□□ 2.85
COL9A2-204ENST00000427563 RAPGEF2Q9Y4G8 1499 aa32.71■■■□□ 2.83
COL9A2-204ENST00000427563 TRHP20396 242 aaPredicted RBP32.67■■■□□ 2.82
COL9A2-204ENST00000427563 IQGAP2Q13576 1575 aa32.65■■■□□ 2.82
COL9A2-204ENST00000427563 PRXQ9BXM0 1461 aa32.57■■■□□ 2.8
COL9A2-204ENST00000427563 ADCY10Q96PN6 1610 aa32.54■■■□□ 2.8
COL9A2-204ENST00000427563 DISP1Q96F81 1524 aa32.51■■■□□ 2.79
COL9A2-204ENST00000427563 CTTNBP2Q8WZ74 1663 aa32.5■■■□□ 2.79
COL9A2-204ENST00000427563 UGGT2Q9NYU1 1516 aa32.48■■■□□ 2.79
COL9A2-204ENST00000427563 CARMIL2Q6F5E8 1435 aa32.44■■■□□ 2.78
COL9A2-204ENST00000427563 TNIKQ9UKE5 1360 aa32.42■■■□□ 2.78
COL9A2-204ENST00000427563 PTPRGP23470 1445 aa32.42■■■□□ 2.78
COL9A2-204ENST00000427563 KIF13AQ9H1H9 1805 aa32.38■■■□□ 2.77
COL9A2-204ENST00000427563 KIAA0556O60303 1618 aa32.38■■■□□ 2.77
COL9A2-204ENST00000427563 CSRNP3Q8WYN3 585 aa32.36■■■□□ 2.77
COL9A2-204ENST00000427563 MAPKBP1O60336 1514 aa32.34■■■□□ 2.77
COL9A2-204ENST00000427563 TTBK1Q5TCY1 1321 aaPredicted RBP32.33■■■□□ 2.77
COL9A2-204ENST00000427563 CHIC1Q5VXU3 224 aa32.31■■■□□ 2.76
COL9A2-204ENST00000427563 EEA1Q15075 1411 aa32.31■■■□□ 2.76
COL9A2-204ENST00000427563 UHRF1BP1LA0JNW5 1464 aa32.24■■■□□ 2.75
COL9A2-204ENST00000427563 NPM1P06748 294 aaKnown RBP eCLIP32.23■■■□□ 2.75
COL9A2-204ENST00000427563 ABCC10Q5T3U5 1492 aa32.23■■■□□ 2.75
COL9A2-204ENST00000427563 ABCC2Q92887 1545 aa32.22■■■□□ 2.75
COL9A2-204ENST00000427563 UACAQ9BZF9 1416 aa32.22■■■□□ 2.75
COL9A2-204ENST00000427563 DIP2BQ9P265 1576 aa32.21■■■□□ 2.75
COL9A2-204ENST00000427563 FAM9AQ8IZU1 332 aaPredicted RBP32.2■■■□□ 2.75
COL9A2-204ENST00000427563 GOLGA3Q08378 1498 aa32.16■■■□□ 2.74
COL9A2-204ENST00000427563 KIF21BO75037 1637 aa32.11■■■□□ 2.73
COL9A2-204ENST00000427563 FAM69CQ0P6D2 419 aa32.11■■■□□ 2.73
COL9A2-204ENST00000427563 KDM5BQ9UGL1 1544 aa32.1■■■□□ 2.73
COL9A2-204ENST00000427563 PLB1Q6P1J6 1458 aa32.1■■■□□ 2.73
COL9A2-204ENST00000427563 ZCCHC11Q5TAX3 1644 aaKnown RBP32.08■■■□□ 2.73
COL9A2-204ENST00000427563 SAMD9Q5K651 1589 aa32.07■■■□□ 2.72
COL9A2-204ENST00000427563 ABCA8O94911 1581 aa32.07■■■□□ 2.72
COL9A2-204ENST00000427563 ASXL2Q76L83 1435 aa32.06■■■□□ 2.72
COL9A2-204ENST00000427563 P3H3Q8IVL6 736 aa31.98■■■□□ 2.71
COL9A2-204ENST00000427563 TSPOAP1O95153 1857 aa31.97■■■□□ 2.71
COL9A2-204ENST00000427563 GLI2P10070 1586 aa31.94■■■□□ 2.7
COL9A2-204ENST00000427563 PPRC1Q5VV67 1664 aaKnown RBP31.89■■■□□ 2.7
COL9A2-204ENST00000427563 EPRSP07814 1512 aaKnown RBP31.89■■■□□ 2.7
COL9A2-204ENST00000427563 RANGAP1P46060 587 aaPredicted RBP31.85■■■□□ 2.69
COL9A2-204ENST00000427563 EHMT2Q96KQ7 1210 aa31.83■■■□□ 2.69
COL9A2-204ENST00000427563 FHOD3Q2V2M9 1422 aa31.83■■■□□ 2.69
COL9A2-204ENST00000427563 WDR7Q9Y4E6 1490 aa31.82■■■□□ 2.68
COL9A2-204ENST00000427563 MAP3K4Q9Y6R4 1608 aa31.82■■■□□ 2.68
COL9A2-204ENST00000427563 RAPGEF6Q8TEU7 1601 aa31.8■■■□□ 2.68
COL9A2-204ENST00000427563 ATP10BO94823 1461 aa31.78■■■□□ 2.68
COL9A2-204ENST00000427563 EFCAB5A4FU69 1503 aa31.77■■■□□ 2.68
COL9A2-204ENST00000427563 KDM6BO15054 1643 aa31.74■■■□□ 2.67
COL9A2-204ENST00000427563 ARID3CA6NKF2 412 aa31.73■■■□□ 2.67
COL9A2-204ENST00000427563 UBTFP17480 764 aaKnown RBP31.71■■■□□ 2.67
COL9A2-204ENST00000427563 NUP153P49790 1475 aaKnown RBP31.7■■■□□ 2.66
COL9A2-204ENST00000427563 ARHGAP35Q9NRY4 1499 aa31.63■■■□□ 2.65
COL9A2-204ENST00000427563 CFAP43Q8NDM7 1665 aa31.62■■■□□ 2.65
COL9A2-204ENST00000427563 KCNH8Q96L42 1107 aa31.62■■■□□ 2.65
COL9A2-204ENST00000427563 COL17A1Q9UMD9 1497 aaPredicted RBP31.59■■■□□ 2.65
COL9A2-204ENST00000427563 TEX14Q8IWB6 1497 aa31.55■■■□□ 2.64
COL9A2-204ENST00000427563 CD109Q6YHK3 1445 aa31.55■■■□□ 2.64
COL9A2-204ENST00000427563 MAGI3Q5TCQ9 1506 aa31.54■■■□□ 2.64
COL9A2-204ENST00000427563 ABCA9Q8IUA7 1624 aa31.51■■■□□ 2.63
COL9A2-204ENST00000427563 CDK13Q14004 1512 aaKnown RBP31.45■■■□□ 2.63
COL9A2-204ENST00000427563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.44■■■□□ 2.62
COL9A2-204ENST00000427563 HNRNPUL2Q1KMD3 747 aaKnown RBP31.44■■■□□ 2.62
COL9A2-204ENST00000427563 FMN1Q68DA7 1419 aa31.43■■■□□ 2.62
COL9A2-204ENST00000427563 HECW1Q76N89 1606 aa31.38■■■□□ 2.61
COL9A2-204ENST00000427563 LRRIQ1Q96JM4 1722 aa31.38■■■□□ 2.61
COL9A2-204ENST00000427563 PLEKHD1A6NEE1 506 aa31.33■■■□□ 2.61
COL9A2-204ENST00000427563 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.31■■■□□ 2.6
COL9A2-204ENST00000427563 TTC37Q6PGP7 1564 aa31.29■■■□□ 2.6
COL9A2-204ENST00000427563 PCF11O94913 1555 aaKnown RBP31.28■■■□□ 2.6
COL9A2-204ENST00000427563 ARAP3Q8WWN8 1544 aa31.28■■■□□ 2.6
COL9A2-204ENST00000427563 ATP1B4Q9UN42 357 aaPredicted RBP31.25■■■□□ 2.59
COL9A2-204ENST00000427563 CLIP1P30622 1438 aa31.24■■■□□ 2.59
COL9A2-204ENST00000427563 KDM4FA0A1W2PPD8 638 aa31.22■■■□□ 2.59
COL9A2-204ENST00000427563 AEBP2Q6ZN18 517 aaPredicted RBP31.22■■■□□ 2.59
COL9A2-204ENST00000427563 NEO1Q92859 1461 aa31.21■■■□□ 2.59
COL9A2-204ENST00000427563 CASKIN1Q8WXD9 1431 aa31.21■■■□□ 2.59
COL9A2-204ENST00000427563 KIF14Q15058 1648 aa31.17■■■□□ 2.58
COL9A2-204ENST00000427563 PHLDB1Q86UU1 1377 aa31.17■■■□□ 2.58
COL9A2-204ENST00000427563 FRMPD1Q5SYB0 1578 aa31.16■■■□□ 2.58
COL9A2-204ENST00000427563 TROQ12816 1431 aaPredicted RBP31.12■■■□□ 2.57
COL9A2-204ENST00000427563 FYCO1Q9BQS8 1478 aa31.11■■■□□ 2.57
COL9A2-204ENST00000427563 FANCAO15360 1455 aa31.1■■■□□ 2.57
COL9A2-204ENST00000427563 RAPGEF3O95398 923 aa31.09■■■□□ 2.57
COL9A2-204ENST00000427563 CFAP74Q9C0B2 1584 aa31.08■■■□□ 2.57
COL9A2-204ENST00000427563 ADGRL1O94910 1474 aa31.08■■■□□ 2.57
COL9A2-204ENST00000427563 CCDC18Q5T9S5 1454 aa31.08■■■□□ 2.57
COL9A2-204ENST00000427563 AKNAQ7Z591 1439 aa31.07■■■□□ 2.57
COL9A2-204ENST00000427563 RICTORQ6R327 1708 aa31.07■■■□□ 2.56
COL9A2-204ENST00000427563 PLCH2O75038 1416 aa31.07■■■□□ 2.56
COL9A2-204ENST00000427563 MYO5CQ9NQX4 1742 aa31.06■■■□□ 2.56
COL9A2-204ENST00000427563 CEP162Q5TB80 1403 aa31.06■■■□□ 2.56
COL9A2-204ENST00000427563 CDK11AQ9UQ88 783 aaPredicted RBP31.05■■■□□ 2.56
COL9A2-204ENST00000427563 LOC105371045A0A1W2PR82 267 aa31.01■■■□□ 2.55
COL9A2-204ENST00000427563 DENND4BO75064 1496 aaPredicted RBP30.99■■■□□ 2.55
COL9A2-204ENST00000427563 CDC42BPBQ9Y5S2 1711 aa30.95■■■□□ 2.54
COL9A2-204ENST00000427563 ZMYM4Q5VZL5 1548 aa30.91■■■□□ 2.54
COL9A2-204ENST00000427563 ARHGEF40Q8TER5 1519 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms