RNA–Protein interactions for RNA: ENST00000427383.6

CHEK1-202, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-202ENST00000427383 CEP170Q5SW79 1584 aa27.29■■□□□ 1.96
CHEK1-202ENST00000427383 IQGAP2Q13576 1575 aa27.29■■□□□ 1.96
CHEK1-202ENST00000427383 CHD1O14646 1710 aa27.28■■□□□ 1.96
CHEK1-202ENST00000427383 ARAP1Q96P48 1450 aa27.27■■□□□ 1.96
CHEK1-202ENST00000427383 NUP160Q12769 1436 aa27.26■■□□□ 1.95
CHEK1-202ENST00000427383 EFCAB5A4FU69 1503 aa27.25■■□□□ 1.95
CHEK1-202ENST00000427383 CHMP7Q8WUX9 453 aaPredicted RBP27.25■■□□□ 1.95
CHEK1-202ENST00000427383 KIAA0586Q9BVV6 1533 aa27.24■■□□□ 1.95
CHEK1-202ENST00000427383 SAMD9Q5K651 1589 aa27.23■■□□□ 1.95
CHEK1-202ENST00000427383 RANGAP1P46060 587 aaPredicted RBP27.21■■□□□ 1.95
CHEK1-202ENST00000427383 VPS8Q8N3P4 1428 aa27.19■■□□□ 1.94
CHEK1-202ENST00000427383 UGGT2Q9NYU1 1516 aa27.17■■□□□ 1.94
CHEK1-202ENST00000427383 FBLN2P98095 1184 aa27.15■■□□□ 1.94
CHEK1-202ENST00000427383 FHOD3Q2V2M9 1422 aa27.05■■□□□ 1.92
CHEK1-202ENST00000427383 DISP1Q96F81 1524 aa27.03■■□□□ 1.92
CHEK1-202ENST00000427383 KIAA0556O60303 1618 aa27.03■■□□□ 1.92
CHEK1-202ENST00000427383 CLASP1Q7Z460 1538 aa26.99■■□□□ 1.91
CHEK1-202ENST00000427383 SHROOM2Q13796 1616 aa26.98■■□□□ 1.91
CHEK1-202ENST00000427383 PCF11O94913 1555 aaKnown RBP26.96■■□□□ 1.91
CHEK1-202ENST00000427383 P3H3Q8IVL6 736 aa26.95■■□□□ 1.91
CHEK1-202ENST00000427383 FMN1Q68DA7 1419 aa26.94■■□□□ 1.9
CHEK1-202ENST00000427383 JPH4Q96JJ6 628 aa26.9■■□□□ 1.9
CHEK1-202ENST00000427383 FYCO1Q9BQS8 1478 aa26.89■■□□□ 1.9
CHEK1-202ENST00000427383 CASKIN1Q8WXD9 1431 aa26.88■■□□□ 1.89
CHEK1-202ENST00000427383 CARMIL2Q6F5E8 1435 aa26.85■■□□□ 1.89
CHEK1-202ENST00000427383 MAP3K1Q13233 1512 aa26.82■■□□□ 1.88
CHEK1-202ENST00000427383 CFAP43Q8NDM7 1665 aa26.81■■□□□ 1.88
CHEK1-202ENST00000427383 PRG4Q92954 1404 aaPredicted RBP26.81■■□□□ 1.88
CHEK1-202ENST00000427383 LRRIQ1Q96JM4 1722 aa26.79■■□□□ 1.88
CHEK1-202ENST00000427383 TIAM1Q13009 1591 aa26.79■■□□□ 1.88
CHEK1-202ENST00000427383 HECW1Q76N89 1606 aa26.74■■□□□ 1.87
CHEK1-202ENST00000427383 ERCC6L2Q5T890 1561 aa26.74■■□□□ 1.87
CHEK1-202ENST00000427383 PPARGC1BQ86YN6 1023 aaKnown RBP26.71■■□□□ 1.87
CHEK1-202ENST00000427383 RAPGEF6Q8TEU7 1601 aa26.71■■□□□ 1.87
CHEK1-202ENST00000427383 APLP2Q06481 763 aa26.7■■□□□ 1.87
CHEK1-202ENST00000427383 OSCARQ8IYS5 282 aa26.66■■□□□ 1.86
CHEK1-202ENST00000427383 ABCA8O94911 1581 aa26.65■■□□□ 1.86
CHEK1-202ENST00000427383 CCDC18Q5T9S5 1454 aa26.64■■□□□ 1.86
CHEK1-202ENST00000427383 PLB1Q6P1J6 1458 aa26.64■■□□□ 1.86
CHEK1-202ENST00000427383 NUP153P49790 1475 aaKnown RBP26.64■■□□□ 1.85
CHEK1-202ENST00000427383 LRRC9Q6ZRR7 1453 aa26.63■■□□□ 1.85
CHEK1-202ENST00000427383 KANK4Q5T7N3 995 aaPredicted RBP26.63■■□□□ 1.85
CHEK1-202ENST00000427383 EPRSP07814 1512 aaKnown RBP26.62■■□□□ 1.85
CHEK1-202ENST00000427383 PTPRGP23470 1445 aa26.59■■□□□ 1.85
CHEK1-202ENST00000427383 TRIM26Q12899 539 aaPredicted RBP26.57■■□□□ 1.84
CHEK1-202ENST00000427383 ATP1B4Q9UN42 357 aaPredicted RBP26.57■■□□□ 1.84
CHEK1-202ENST00000427383 CDK13Q14004 1512 aaKnown RBP26.56■■□□□ 1.84
CHEK1-202ENST00000427383 TTBK1Q5TCY1 1321 aaPredicted RBP26.54■■□□□ 1.84
CHEK1-202ENST00000427383 MAGI3Q5TCQ9 1506 aa26.52■■□□□ 1.84
CHEK1-202ENST00000427383 EHBP1L1Q8N3D4 1523 aa26.5■■□□□ 1.83
CHEK1-202ENST00000427383 UACAQ9BZF9 1416 aa26.47■■□□□ 1.83
CHEK1-202ENST00000427383 ABCC2Q92887 1545 aa26.46■■□□□ 1.83
CHEK1-202ENST00000427383 PCGF6Q9BYE7 350 aa26.44■■□□□ 1.82
CHEK1-202ENST00000427383 MTUS2Q5JR59 1369 aa26.43■■□□□ 1.82
CHEK1-202ENST00000427383 UHRF1BP1LA0JNW5 1464 aa26.42■■□□□ 1.82
CHEK1-202ENST00000427383 SUPT6HQ7KZ85 1726 aaKnown RBP26.41■■□□□ 1.82
CHEK1-202ENST00000427383 ATP10BO94823 1461 aa26.4■■□□□ 1.82
CHEK1-202ENST00000427383 ARHGEF11O15085 1522 aa26.39■■□□□ 1.82
CHEK1-202ENST00000427383 ARID3CA6NKF2 412 aa26.36■■□□□ 1.81
CHEK1-202ENST00000427383 RRBP1Q9P2E9 1410 aaKnown RBP26.35■■□□□ 1.81
CHEK1-202ENST00000427383 ADCY10Q96PN6 1610 aa26.35■■□□□ 1.81
CHEK1-202ENST00000427383 PHLDB1Q86UU1 1377 aa26.35■■□□□ 1.81
CHEK1-202ENST00000427383 NCOA2Q15596 1464 aa26.34■■□□□ 1.81
CHEK1-202ENST00000427383 TROQ12816 1431 aaPredicted RBP26.31■■□□□ 1.8
CHEK1-202ENST00000427383 KDM5BQ9UGL1 1544 aa26.31■■□□□ 1.8
CHEK1-202ENST00000427383 ZCCHC11Q5TAX3 1644 aaKnown RBP26.3■■□□□ 1.8
CHEK1-202ENST00000427383 CDK11AQ9UQ88 783 aaPredicted RBP26.27■■□□□ 1.8
CHEK1-202ENST00000427383 RIMBP3CA6NJZ7 1639 aa26.25■■□□□ 1.79
CHEK1-202ENST00000427383 RIMBP3BA6NNM3 1639 aa26.25■■□□□ 1.79
CHEK1-202ENST00000427383 RIMBP3Q9UFD9 1639 aa26.25■■□□□ 1.79
CHEK1-202ENST00000427383 KIF14Q15058 1648 aa26.25■■□□□ 1.79
CHEK1-202ENST00000427383 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.23■■□□□ 1.79
CHEK1-202ENST00000427383 HNRNPUL2Q1KMD3 747 aaKnown RBP26.23■■□□□ 1.79
CHEK1-202ENST00000427383 CCNB3Q8WWL7 1395 aa26.23■■□□□ 1.79
CHEK1-202ENST00000427383 MYOM3Q5VTT5 1437 aa26.21■■□□□ 1.79
CHEK1-202ENST00000427383 FGD6Q6ZV73 1430 aa26.19■■□□□ 1.78
CHEK1-202ENST00000427383 PLEKHD1A6NEE1 506 aa26.15■■□□□ 1.78
CHEK1-202ENST00000427383 ABCC10Q5T3U5 1492 aa26.14■■□□□ 1.78
CHEK1-202ENST00000427383 ITSN2Q9NZM3 1697 aa26.13■■□□□ 1.77
CHEK1-202ENST00000427383 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.13■■□□□ 1.77
CHEK1-202ENST00000427383 PTPN23Q9H3S7 1636 aa26.11■■□□□ 1.77
CHEK1-202ENST00000427383 MIA2Q96PC5 1412 aa26.11■■□□□ 1.77
CHEK1-202ENST00000427383 CDC42BPAQ5VT25 1732 aa26.1■■□□□ 1.77
CHEK1-202ENST00000427383 TCOF1Q13428 1488 aaKnown RBP26.09■■□□□ 1.77
CHEK1-202ENST00000427383 GPATCH8Q9UKJ3 1502 aaKnown RBP26.07■■□□□ 1.76
CHEK1-202ENST00000427383 TTC37Q6PGP7 1564 aa26.05■■□□□ 1.76
CHEK1-202ENST00000427383 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.05■■□□□ 1.76
CHEK1-202ENST00000427383 WDR7Q9Y4E6 1490 aa26.04■■□□□ 1.76
CHEK1-202ENST00000427383 PREX2Q70Z35 1606 aa26.02■■□□□ 1.76
CHEK1-202ENST00000427383 ASXL2Q76L83 1435 aa25.99■■□□□ 1.75
CHEK1-202ENST00000427383 CDC42BPBQ9Y5S2 1711 aa25.98■■□□□ 1.75
CHEK1-202ENST00000427383 MYO5CQ9NQX4 1742 aa25.97■■□□□ 1.75
CHEK1-202ENST00000427383 FAM50AQ14320 339 aaKnown RBP25.96■■□□□ 1.75
CHEK1-202ENST00000427383 CYB5RLQ6IPT4 315 aa25.94■■□□□ 1.74
CHEK1-202ENST00000427383 MAPKBP1O60336 1514 aa25.94■■□□□ 1.74
CHEK1-202ENST00000427383 ABCA9Q8IUA7 1624 aa25.93■■□□□ 1.74
CHEK1-202ENST00000427383 CAMSAP2Q08AD1 1489 aa25.92■■□□□ 1.74
CHEK1-202ENST00000427383 DNMT1P26358 1616 aaKnown RBP25.9■■□□□ 1.74
CHEK1-202ENST00000427383 NPM1P06748 294 aaKnown RBP eCLIP25.9■■□□□ 1.74
CHEK1-202ENST00000427383 CFDP1Q9UEE9 299 aaPredicted RBP25.89■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms