RNA–Protein interactions for RNA: ENST00000427230.2

NANOGP4-201, Transcript of Nanog homeobox pseudogene 4, humanhuman

BASIC

Gene NANOGP4, Length 913 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP4-201ENST00000427230 RIMBP3BA6NNM3 1639 aa11.17□□□□□ -0.62
NANOGP4-201ENST00000427230 RIMBP3Q9UFD9 1639 aa11.17□□□□□ -0.62
NANOGP4-201ENST00000427230 LAMC3Q9Y6N6 1575 aa11.16□□□□□ -0.62
NANOGP4-201ENST00000427230 SLC24A1O60721 1099 aa11.16□□□□□ -0.62
NANOGP4-201ENST00000427230 HMGXB3Q12766 1538 aa11.14□□□□□ -0.63
NANOGP4-201ENST00000427230 PDS5BQ9NTI5 1447 aa11.14□□□□□ -0.63
NANOGP4-201ENST00000427230 SPOCK2Q92563 424 aa11.12□□□□□ -0.63
NANOGP4-201ENST00000427230 CHRDL2Q6WN34 429 aa11.11□□□□□ -0.63
NANOGP4-201ENST00000427230 PKD2Q13563 968 aa11.08□□□□□ -0.64
NANOGP4-201ENST00000427230 CYB5RLQ6IPT4 315 aa11.08□□□□□ -0.64
NANOGP4-201ENST00000427230 MRC2Q9UBG0 1479 aa11.07□□□□□ -0.64
NANOGP4-201ENST00000427230 WDR62O43379 1518 aa11.07□□□□□ -0.64
NANOGP4-201ENST00000427230 ARHGEF11O15085 1522 aa11.04□□□□□ -0.64
NANOGP4-201ENST00000427230 PLEKHG5O94827 1062 aa11.04□□□□□ -0.64
NANOGP4-201ENST00000427230 CLEC11AQ9Y240 323 aa11.04□□□□□ -0.64
NANOGP4-201ENST00000427230 BAZ1BQ9UIG0 1483 aaKnown RBP11.04□□□□□ -0.64
NANOGP4-201ENST00000427230 AKT1S1Q96B36 256 aa11.03□□□□□ -0.64
NANOGP4-201ENST00000427230 ILDR1Q86SU0 546 aaPredicted RBP11.01□□□□□ -0.65
NANOGP4-201ENST00000427230 SMARCA4P51532 1647 aa11□□□□□ -0.65
NANOGP4-201ENST00000427230 SPDYE1Q8NFV5 336 aaPredicted RBP11□□□□□ -0.65
NANOGP4-201ENST00000427230 REM2Q8IYK8 340 aaPredicted RBP10.98□□□□□ -0.65
NANOGP4-201ENST00000427230 CADPSQ9ULU8 1353 aa10.98□□□□□ -0.65
NANOGP4-201ENST00000427230 ECM2O94769 699 aaPredicted RBP10.97□□□□□ -0.65
NANOGP4-201ENST00000427230 CIZ1Q9ULV3 898 aaPredicted RBP10.96□□□□□ -0.65
NANOGP4-201ENST00000427230 ZBTB47Q9UFB7 747 aaPredicted RBP10.95□□□□□ -0.66
NANOGP4-201ENST00000427230 PRR29P0C7W0 189 aa10.94□□□□□ -0.66
NANOGP4-201ENST00000427230 ARAP1Q96P48 1450 aa10.91□□□□□ -0.66
NANOGP4-201ENST00000427230 PEG3Q9GZU2 1588 aa10.9□□□□□ -0.67
NANOGP4-201ENST00000427230 CEP164Q9UPV0 1460 aa10.88□□□□□ -0.67
NANOGP4-201ENST00000427230 RGL2O15211 777 aa10.86□□□□□ -0.67
NANOGP4-201ENST00000427230 SP7Q8TDD2 431 aaPredicted RBP10.85□□□□□ -0.67
NANOGP4-201ENST00000427230 CREBZFQ9NS37 354 aa10.85□□□□□ -0.67
NANOGP4-201ENST00000427230 PITPNM1O00562 1244 aa10.84□□□□□ -0.67
NANOGP4-201ENST00000427230 FANCD2Q9BXW9 1451 aa10.83□□□□□ -0.68
NANOGP4-201ENST00000427230 PIP4P2Q8N4L2 257 aa10.82□□□□□ -0.68
NANOGP4-201ENST00000427230 PLCB2Q00722 1185 aa10.81□□□□□ -0.68
NANOGP4-201ENST00000427230 DCAF8Q5TAQ9 597 aa10.81□□□□□ -0.68
NANOGP4-201ENST00000427230 URB2Q14146 1524 aaKnown RBP10.8□□□□□ -0.68
NANOGP4-201ENST00000427230 NUBP1P53384 320 aa10.8□□□□□ -0.68
NANOGP4-201ENST00000427230 ZNF608Q9ULD9 1512 aaPredicted RBP10.79□□□□□ -0.68
NANOGP4-201ENST00000427230 NPM1P06748 294 aaKnown RBP eCLIP10.78□□□□□ -0.68
NANOGP4-201ENST00000427230 MNX1P50219 401 aaPredicted RBP10.76□□□□□ -0.69
NANOGP4-201ENST00000427230 GSE1Q14687 1217 aa10.76□□□□□ -0.69
NANOGP4-201ENST00000427230 RSF1Q96T23 1441 aaPredicted RBP10.75□□□□□ -0.69
NANOGP4-201ENST00000427230 MROH2BQ7Z745 1585 aa10.75□□□□□ -0.69
NANOGP4-201ENST00000427230 FXR2P51116 673 aaKnown RBP eCLIP10.74□□□□□ -0.69
NANOGP4-201ENST00000427230 HAP1P54257 671 aaPredicted RBP10.74□□□□□ -0.69
NANOGP4-201ENST00000427230 CHADLQ6NUI6 762 aa10.73□□□□□ -0.69
NANOGP4-201ENST00000427230 CHGAP10645 457 aaKnown RBP10.71□□□□□ -0.69
NANOGP4-201ENST00000427230 BBXQ8WY36 941 aaPredicted RBP10.71□□□□□ -0.69
NANOGP4-201ENST00000427230 IFT140Q96RY7 1462 aa10.71□□□□□ -0.69
NANOGP4-201ENST00000427230 CHD1O14646 1710 aa10.7□□□□□ -0.7
NANOGP4-201ENST00000427230 CFTRP13569 1480 aa10.7□□□□□ -0.7
NANOGP4-201ENST00000427230 RASEFQ8IZ41 740 aa10.7□□□□□ -0.7
NANOGP4-201ENST00000427230 FAM212AQ96EL1 285 aa10.7□□□□□ -0.7
NANOGP4-201ENST00000427230 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.7□□□□□ -0.7
NANOGP4-201ENST00000427230 PAXIP1Q6ZW49 1069 aaPredicted RBP10.68□□□□□ -0.7
NANOGP4-201ENST00000427230 CFAP44Q96MT7 982 aa10.68□□□□□ -0.7
NANOGP4-201ENST00000427230 KDM4FA0A1W2PPD8 638 aa10.65□□□□□ -0.7
NANOGP4-201ENST00000427230 HAX1O00165 279 aa10.65□□□□□ -0.7
NANOGP4-201ENST00000427230 RNF25Q96BH1 459 aaPredicted RBP10.65□□□□□ -0.7
NANOGP4-201ENST00000427230 EIF4G3O43432 1585 aaKnown RBP10.64□□□□□ -0.71
NANOGP4-201ENST00000427230 EVX2Q03828 476 aa10.63□□□□□ -0.71
NANOGP4-201ENST00000427230 AQRO60306 1485 aaKnown RBP eCLIP10.62□□□□□ -0.71
NANOGP4-201ENST00000427230 PYGBP11216 843 aa10.61□□□□□ -0.71
NANOGP4-201ENST00000427230 PRKAR2AP13861 404 aaKnown RBP10.6□□□□□ -0.71
NANOGP4-201ENST00000427230 TSPYL2Q9H2G4 693 aaPredicted RBP10.6□□□□□ -0.71
NANOGP4-201ENST00000427230 RIOK3O14730 519 aaKnown RBP10.59□□□□□ -0.71
NANOGP4-201ENST00000427230 FARP1Q9Y4F1 1045 aaPredicted RBP10.59□□□□□ -0.71
NANOGP4-201ENST00000427230 SPRYD3Q8NCJ5 442 aa10.58□□□□□ -0.72
NANOGP4-201ENST00000427230 CLASP1Q7Z460 1538 aa10.58□□□□□ -0.72
NANOGP4-201ENST00000427230 WIZO95785 1651 aa10.57□□□□□ -0.72
NANOGP4-201ENST00000427230 TOPBP1Q92547 1522 aa10.55□□□□□ -0.72
NANOGP4-201ENST00000427230 CHRM1P11229 460 aaPredicted RBP10.54□□□□□ -0.72
NANOGP4-201ENST00000427230 HS6ST3Q8IZP7 471 aa10.54□□□□□ -0.72
NANOGP4-201ENST00000427230 GAPVD1Q14C86 1478 aa10.54□□□□□ -0.72
NANOGP4-201ENST00000427230 TAOK2Q9UL54 1235 aa10.52□□□□□ -0.73
NANOGP4-201ENST00000427230 TARBP1Q13395 1621 aaKnown RBP10.51□□□□□ -0.73
NANOGP4-201ENST00000427230 STK25O00506 426 aa10.51□□□□□ -0.73
NANOGP4-201ENST00000427230 VGFO15240 615 aaPredicted RBP10.5□□□□□ -0.73
NANOGP4-201ENST00000427230 CHMP7Q8WUX9 453 aaPredicted RBP10.5□□□□□ -0.73
NANOGP4-201ENST00000427230 VSIG10Q8N0Z9 540 aa10.49□□□□□ -0.73
NANOGP4-201ENST00000427230 TSHZ2Q9NRE2 1034 aa10.49□□□□□ -0.73
NANOGP4-201ENST00000427230 KIF13AQ9H1H9 1805 aa10.48□□□□□ -0.73
NANOGP4-201ENST00000427230 SYNJ1O43426 1573 aa10.48□□□□□ -0.73
NANOGP4-201ENST00000427230 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.47□□□□□ -0.73
NANOGP4-201ENST00000427230 ZFP91Q96JP5 570 aaPredicted RBP10.47□□□□□ -0.73
NANOGP4-201ENST00000427230 ABCC8Q09428 1581 aa10.47□□□□□ -0.73
NANOGP4-201ENST00000427230 PRDM2Q13029 1718 aa10.47□□□□□ -0.73
NANOGP4-201ENST00000427230 FBXO41Q8TF61 875 aa10.46□□□□□ -0.73
NANOGP4-201ENST00000427230 KDM2AQ9Y2K7 1162 aa10.46□□□□□ -0.73
NANOGP4-201ENST00000427230 STK24Q9Y6E0 443 aa10.46□□□□□ -0.73
NANOGP4-201ENST00000427230 TDRD9Q8NDG6 1382 aaKnown RBP10.46□□□□□ -0.74
NANOGP4-201ENST00000427230 NKX1-1Q15270 411 aaPredicted RBP10.45□□□□□ -0.74
NANOGP4-201ENST00000427230 BCL11BQ9C0K0 894 aaPredicted RBP10.45□□□□□ -0.74
NANOGP4-201ENST00000427230 SNAPC4Q5SXM2 1469 aa10.44□□□□□ -0.74
NANOGP4-201ENST00000427230 DNMBPQ6XZF7 1577 aa10.43□□□□□ -0.74
NANOGP4-201ENST00000427230 PCDHB8Q9UN66 801 aa10.42□□□□□ -0.74
NANOGP4-201ENST00000427230 PCDHB13Q9Y5F0 798 aa10.42□□□□□ -0.74
NANOGP4-201ENST00000427230 ERCC6L2Q5T890 1561 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms