RNA–Protein interactions for RNA: ENST00000426969.5

LINC00298-201, long intergenic non-protein coding RNA 298, humanhuman

TSL 1 (best) BASIC

Gene LINC00298, Length 2,236 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00298-201ENST00000426969 RAB3GAP2Q9H2M9 1393 aa13.89□□□□□ -0.19
LINC00298-201ENST00000426969 ANP32CO43423 234 aa13.88□□□□□ -0.19
LINC00298-201ENST00000426969 DDX10Q13206 875 aaKnown RBP13.87□□□□□ -0.19
LINC00298-201ENST00000426969 KANK4Q5T7N3 995 aaPredicted RBP13.87□□□□□ -0.19
LINC00298-201ENST00000426969 SETD5Q9C0A6 1442 aa13.85□□□□□ -0.19
LINC00298-201ENST00000426969 ITGAEP38570 1179 aa13.84□□□□□ -0.19
LINC00298-201ENST00000426969 DEKP35659 375 aaKnown RBP13.81□□□□□ -0.2
LINC00298-201ENST00000426969 TRIM52Q96A61 297 aa13.8□□□□□ -0.2
LINC00298-201ENST00000426969 TIAM1Q13009 1591 aa13.78□□□□□ -0.2
LINC00298-201ENST00000426969 PPP4R2Q9NY27 417 aa13.77□□□□□ -0.21
LINC00298-201ENST00000426969 ARHGAP35Q9NRY4 1499 aa13.76□□□□□ -0.21
LINC00298-201ENST00000426969 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.72□□□□□ -0.21
LINC00298-201ENST00000426969 NOP58Q9Y2X3 529 aaKnown RBP13.7□□□□□ -0.22
LINC00298-201ENST00000426969 CFAP43Q8NDM7 1665 aa13.7□□□□□ -0.22
LINC00298-201ENST00000426969 LRRC9Q6ZRR7 1453 aa13.7□□□□□ -0.22
LINC00298-201ENST00000426969 KIF27Q86VH2 1401 aa13.69□□□□□ -0.22
LINC00298-201ENST00000426969 RANGAP1P46060 587 aaPredicted RBP13.69□□□□□ -0.22
LINC00298-201ENST00000426969 FHAD1B1AJZ9 1412 aa13.68□□□□□ -0.22
LINC00298-201ENST00000426969 ATAD2BQ9ULI0 1458 aa13.68□□□□□ -0.22
LINC00298-201ENST00000426969 SIN3AQ96ST3 1273 aa13.67□□□□□ -0.22
LINC00298-201ENST00000426969 HNRNPUQ00839 825 aaKnown RBP eCLIP13.67□□□□□ -0.22
LINC00298-201ENST00000426969 BICRAQ9NZM4 1560 aa13.63□□□□□ -0.23
LINC00298-201ENST00000426969 TONSLQ96HA7 1378 aa13.62□□□□□ -0.23
LINC00298-201ENST00000426969 PHLDB1Q86UU1 1377 aa13.62□□□□□ -0.23
LINC00298-201ENST00000426969 NCOA2Q15596 1464 aa13.61□□□□□ -0.23
LINC00298-201ENST00000426969 ZBED9Q6R2W3 1325 aa13.59□□□□□ -0.23
LINC00298-201ENST00000426969 CUX1P39880 1505 aa13.58□□□□□ -0.24
LINC00298-201ENST00000426969 UACAQ9BZF9 1416 aa13.58□□□□□ -0.24
LINC00298-201ENST00000426969 RTL5Q5HYW3 569 aaPredicted RBP13.58□□□□□ -0.24
LINC00298-201ENST00000426969 NCAPD3P42695 1498 aa13.57□□□□□ -0.24
LINC00298-201ENST00000426969 IRX6P78412 446 aaPredicted RBP13.56□□□□□ -0.24
LINC00298-201ENST00000426969 IPO9Q96P70 1041 aaKnown RBP13.56□□□□□ -0.24
LINC00298-201ENST00000426969 KDM5BQ9UGL1 1544 aa13.56□□□□□ -0.24
LINC00298-201ENST00000426969 ANP32AP39687 249 aaKnown RBP13.55□□□□□ -0.24
LINC00298-201ENST00000426969 ANO8Q9HCE9 1232 aaPredicted RBP13.55□□□□□ -0.24
LINC00298-201ENST00000426969 CNTLNQ9NXG0 1405 aa13.55□□□□□ -0.24
LINC00298-201ENST00000426969 HIRIP3Q9BW71 556 aaPredicted RBP13.54□□□□□ -0.24
LINC00298-201ENST00000426969 HFM1A2PYH4 1435 aa13.53□□□□□ -0.24
LINC00298-201ENST00000426969 CCDC18Q5T9S5 1454 aa13.53□□□□□ -0.24
LINC00298-201ENST00000426969 PAK3O75914 559 aaPredicted RBP13.52□□□□□ -0.24
LINC00298-201ENST00000426969 USP35Q9P2H5 1018 aa13.52□□□□□ -0.24
LINC00298-201ENST00000426969 WASHC2AQ641Q2 1341 aa13.52□□□□□ -0.25
LINC00298-201ENST00000426969 PCF11O94913 1555 aaKnown RBP13.51□□□□□ -0.25
LINC00298-201ENST00000426969 AQRO60306 1485 aaKnown RBP eCLIP13.51□□□□□ -0.25
LINC00298-201ENST00000426969 FAM50AQ14320 339 aaKnown RBP13.51□□□□□ -0.25
LINC00298-201ENST00000426969 NBR1Q14596 966 aa13.51□□□□□ -0.25
LINC00298-201ENST00000426969 B4GALNT3Q6L9W6 998 aa13.51□□□□□ -0.25
LINC00298-201ENST00000426969 FYCO1Q9BQS8 1478 aa13.51□□□□□ -0.25
LINC00298-201ENST00000426969 POLR1AO95602 1720 aaPredicted RBP13.51□□□□□ -0.25
LINC00298-201ENST00000426969 PTPN23Q9H3S7 1636 aa13.51□□□□□ -0.25
LINC00298-201ENST00000426969 ZBTB47Q9UFB7 747 aaPredicted RBP13.49□□□□□ -0.25
LINC00298-201ENST00000426969 SMG6Q86US8 1419 aaKnown RBP13.49□□□□□ -0.25
LINC00298-201ENST00000426969 RNF123Q5XPI4 1314 aa13.49□□□□□ -0.25
LINC00298-201ENST00000426969 ABCA5Q8WWZ7 1642 aa13.49□□□□□ -0.25
LINC00298-201ENST00000426969 C11orf95C9JLR9 678 aaPredicted RBP13.48□□□□□ -0.25
LINC00298-201ENST00000426969 PRDM2Q13029 1718 aa13.47□□□□□ -0.25
LINC00298-201ENST00000426969 EFCAB5A4FU69 1503 aa13.46□□□□□ -0.25
LINC00298-201ENST00000426969 SALL2Q9Y467 1007 aaPredicted RBP13.46□□□□□ -0.25
LINC00298-201ENST00000426969 FGD6Q6ZV73 1430 aa13.46□□□□□ -0.25
LINC00298-201ENST00000426969 PRKRIP1Q9H875 184 aaPredicted RBP13.45□□□□□ -0.26
LINC00298-201ENST00000426969 HMGXB3Q12766 1538 aa13.45□□□□□ -0.26
LINC00298-201ENST00000426969 NCOA1Q15788 1441 aa13.44□□□□□ -0.26
LINC00298-201ENST00000426969 UBE2Q2Q8WVN8 375 aa13.44□□□□□ -0.26
LINC00298-201ENST00000426969 CASKIN1Q8WXD9 1431 aa13.44□□□□□ -0.26
LINC00298-201ENST00000426969 HECW1Q76N89 1606 aa13.44□□□□□ -0.26
LINC00298-201ENST00000426969 IGF1RP08069 1367 aa13.44□□□□□ -0.26
LINC00298-201ENST00000426969 WASHC2CQ9Y4E1 1318 aa13.43□□□□□ -0.26
LINC00298-201ENST00000426969 EIF4G2P78344 907 aaKnown RBP eCLIP13.43□□□□□ -0.26
LINC00298-201ENST00000426969 FGD5Q6ZNL6 1462 aa13.42□□□□□ -0.26
LINC00298-201ENST00000426969 FMN1Q68DA7 1419 aa13.42□□□□□ -0.26
LINC00298-201ENST00000426969 HSPA5P11021 654 aaKnown RBP13.41□□□□□ -0.26
LINC00298-201ENST00000426969 NAIPQ13075 1403 aa13.41□□□□□ -0.26
LINC00298-201ENST00000426969 CFTRP13569 1480 aa13.4□□□□□ -0.26
LINC00298-201ENST00000426969 CCDC7Q96M83 1385 aa13.4□□□□□ -0.26
LINC00298-201ENST00000426969 CCDC136Q96JN2 1154 aa13.4□□□□□ -0.26
LINC00298-201ENST00000426969 MRS2Q9HD23 443 aa13.4□□□□□ -0.26
LINC00298-201ENST00000426969 CARMIL1Q5VZK9 1371 aa13.4□□□□□ -0.27
LINC00298-201ENST00000426969 GCC2Q8IWJ2 1684 aa13.39□□□□□ -0.27
LINC00298-201ENST00000426969 NUDCQ9Y266 331 aa13.39□□□□□ -0.27
LINC00298-201ENST00000426969 PPM1GO15355 546 aaPredicted RBP13.38□□□□□ -0.27
LINC00298-201ENST00000426969 IL27Q8NEV9 243 aa13.38□□□□□ -0.27
LINC00298-201ENST00000426969 AKNAQ7Z591 1439 aa13.37□□□□□ -0.27
LINC00298-201ENST00000426969 CCDC184Q52MB2 194 aa13.37□□□□□ -0.27
LINC00298-201ENST00000426969 FAM9BQ8IZU0 186 aa13.36□□□□□ -0.27
LINC00298-201ENST00000426969 TCERG1O14776 1098 aaKnown RBP13.35□□□□□ -0.27
LINC00298-201ENST00000426969 PTPRKQ15262 1439 aa13.35□□□□□ -0.27
LINC00298-201ENST00000426969 THOC2Q8NI27 1593 aaKnown RBP13.34□□□□□ -0.27
LINC00298-201ENST00000426969 PABPN1Q86U42 306 aaKnown RBP eCLIP13.33□□□□□ -0.28
LINC00298-201ENST00000426969 MS4A1P11836 297 aa13.32□□□□□ -0.28
LINC00298-201ENST00000426969 MYOM3Q5VTT5 1437 aa13.32□□□□□ -0.28
LINC00298-201ENST00000426969 SUPT6HQ7KZ85 1726 aaKnown RBP13.32□□□□□ -0.28
LINC00298-201ENST00000426969 CTTNBP2Q8WZ74 1663 aa13.31□□□□□ -0.28
LINC00298-201ENST00000426969 NEFMP07197 916 aa13.31□□□□□ -0.28
LINC00298-201ENST00000426969 SPATA31E1Q6ZUB1 1445 aa13.3□□□□□ -0.28
LINC00298-201ENST00000426969 SNAPC4Q5SXM2 1469 aa13.3□□□□□ -0.28
LINC00298-201ENST00000426969 DENND4BO75064 1496 aaPredicted RBP13.29□□□□□ -0.28
LINC00298-201ENST00000426969 EHBP1L1Q8N3D4 1523 aa13.28□□□□□ -0.28
LINC00298-201ENST00000426969 MIA2Q96PC5 1412 aa13.28□□□□□ -0.28
LINC00298-201ENST00000426969 TCOF1Q13428 1488 aaKnown RBP13.28□□□□□ -0.28
LINC00298-201ENST00000426969 FHOD3Q2V2M9 1422 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms