RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 KIAA0586Q9BVV6 1533 aa39.35■■■■□ 3.89
PDGFA-205ENST00000426681 PRXQ9BXM0 1461 aa39.32■■■■□ 3.89
PDGFA-205ENST00000426681 ARAP1Q96P48 1450 aa39.3■■■■□ 3.88
PDGFA-205ENST00000426681 CSRNP3Q8WYN3 585 aa39.3■■■■□ 3.88
PDGFA-205ENST00000426681 JPH4Q96JJ6 628 aa39.3■■■■□ 3.88
PDGFA-205ENST00000426681 CYB5RLQ6IPT4 315 aa39.24■■■■□ 3.87
PDGFA-205ENST00000426681 ERCC6L2Q5T890 1561 aa39.21■■■■□ 3.87
PDGFA-205ENST00000426681 PRG4Q92954 1404 aaPredicted RBP39.19■■■■□ 3.86
PDGFA-205ENST00000426681 IQGAP2Q13576 1575 aa39.12■■■■□ 3.85
PDGFA-205ENST00000426681 FAM9AQ8IZU1 332 aaPredicted RBP39.1■■■■□ 3.85
PDGFA-205ENST00000426681 CTTNBP2Q8WZ74 1663 aa39■■■■□ 3.83
PDGFA-205ENST00000426681 UGGT2Q9NYU1 1516 aa38.94■■■■□ 3.82
PDGFA-205ENST00000426681 KIF21BO75037 1637 aa38.94■■■■□ 3.82
PDGFA-205ENST00000426681 CARMIL2Q6F5E8 1435 aa38.91■■■■□ 3.82
PDGFA-205ENST00000426681 DISP1Q96F81 1524 aa38.85■■■■□ 3.81
PDGFA-205ENST00000426681 TNIKQ9UKE5 1360 aa38.79■■■■□ 3.8
PDGFA-205ENST00000426681 PTPRGP23470 1445 aa38.75■■■■□ 3.79
PDGFA-205ENST00000426681 KIAA0556O60303 1618 aa38.74■■■■□ 3.79
PDGFA-205ENST00000426681 GOLGA3Q08378 1498 aa38.73■■■■□ 3.79
PDGFA-205ENST00000426681 ADCY10Q96PN6 1610 aa38.58■■■■□ 3.77
PDGFA-205ENST00000426681 UBTFP17480 764 aaKnown RBP38.57■■■■□ 3.76
PDGFA-205ENST00000426681 TTBK1Q5TCY1 1321 aaPredicted RBP38.57■■■■□ 3.76
PDGFA-205ENST00000426681 SAMD9Q5K651 1589 aa38.54■■■■□ 3.76
PDGFA-205ENST00000426681 EHMT2Q96KQ7 1210 aa38.53■■■■□ 3.76
PDGFA-205ENST00000426681 UACAQ9BZF9 1416 aa38.49■■■■□ 3.75
PDGFA-205ENST00000426681 UHRF1BP1LA0JNW5 1464 aa38.48■■■■□ 3.75
PDGFA-205ENST00000426681 NPM1P06748 294 aaKnown RBP eCLIP38.46■■■■□ 3.75
PDGFA-205ENST00000426681 P3H3Q8IVL6 736 aa38.42■■■■□ 3.74
PDGFA-205ENST00000426681 ABCC2Q92887 1545 aa38.42■■■■□ 3.74
PDGFA-205ENST00000426681 EFCAB5A4FU69 1503 aa38.39■■■■□ 3.74
PDGFA-205ENST00000426681 RANGAP1P46060 587 aaPredicted RBP38.39■■■■□ 3.74
PDGFA-205ENST00000426681 TRHP20396 242 aaPredicted RBP38.37■■■■□ 3.73
PDGFA-205ENST00000426681 MAPKBP1O60336 1514 aa38.35■■■■□ 3.73
PDGFA-205ENST00000426681 PLB1Q6P1J6 1458 aa38.35■■■■□ 3.73
PDGFA-205ENST00000426681 ABCA8O94911 1581 aa38.34■■■■□ 3.73
PDGFA-205ENST00000426681 KDM5BQ9UGL1 1544 aa38.29■■■■□ 3.72
PDGFA-205ENST00000426681 FHOD3Q2V2M9 1422 aa38.27■■■■□ 3.72
PDGFA-205ENST00000426681 ARHGAP35Q9NRY4 1499 aa38.2■■■■□ 3.71
PDGFA-205ENST00000426681 ZCCHC11Q5TAX3 1644 aaKnown RBP38.17■■■■□ 3.7
PDGFA-205ENST00000426681 ABCC10Q5T3U5 1492 aa38.15■■■■□ 3.7
PDGFA-205ENST00000426681 RAPGEF6Q8TEU7 1601 aa38.13■■■■□ 3.69
PDGFA-205ENST00000426681 ASXL2Q76L83 1435 aa38.12■■■■□ 3.69
PDGFA-205ENST00000426681 KIF13AQ9H1H9 1805 aa38.11■■■■□ 3.69
PDGFA-205ENST00000426681 DIP2BQ9P265 1576 aa38.06■■■■□ 3.68
PDGFA-205ENST00000426681 FMN1Q68DA7 1419 aa38.04■■■■□ 3.68
PDGFA-205ENST00000426681 FAM69CQ0P6D2 419 aa38.03■■■■□ 3.68
PDGFA-205ENST00000426681 ATP10BO94823 1461 aa38.03■■■■□ 3.68
PDGFA-205ENST00000426681 NUP153P49790 1475 aaKnown RBP38.01■■■■□ 3.67
PDGFA-205ENST00000426681 CLIP1P30622 1438 aa38■■■■□ 3.67
PDGFA-205ENST00000426681 LOC105371045A0A1W2PR82 267 aa37.96■■■■□ 3.67
PDGFA-205ENST00000426681 WDR7Q9Y4E6 1490 aa37.95■■■■□ 3.67
PDGFA-205ENST00000426681 ARID3CA6NKF2 412 aa37.93■■■■□ 3.66
PDGFA-205ENST00000426681 GLI2P10070 1586 aa37.93■■■■□ 3.66
PDGFA-205ENST00000426681 EPRSP07814 1512 aaKnown RBP37.91■■■■□ 3.66
PDGFA-205ENST00000426681 CEP162Q5TB80 1403 aa37.85■■■■□ 3.65
PDGFA-205ENST00000426681 HECW1Q76N89 1606 aa37.82■■■■□ 3.64
PDGFA-205ENST00000426681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.8■■■■□ 3.64
PDGFA-205ENST00000426681 HNRNPUL2Q1KMD3 747 aaKnown RBP37.8■■■■□ 3.64
PDGFA-205ENST00000426681 CASKIN1Q8WXD9 1431 aa37.76■■■■□ 3.63
PDGFA-205ENST00000426681 KCNH8Q96L42 1107 aa37.75■■■■□ 3.63
PDGFA-205ENST00000426681 MAP3K4Q9Y6R4 1608 aa37.73■■■■□ 3.63
PDGFA-205ENST00000426681 ATP1B4Q9UN42 357 aaPredicted RBP37.73■■■■□ 3.63
PDGFA-205ENST00000426681 CDK13Q14004 1512 aaKnown RBP37.71■■■■□ 3.63
PDGFA-205ENST00000426681 TSPOAP1O95153 1857 aa37.71■■■■□ 3.63
PDGFA-205ENST00000426681 PLEKHD1A6NEE1 506 aa37.7■■■■□ 3.63
PDGFA-205ENST00000426681 PCF11O94913 1555 aaKnown RBP37.7■■■■□ 3.63
PDGFA-205ENST00000426681 FYCO1Q9BQS8 1478 aa37.66■■■■□ 3.62
PDGFA-205ENST00000426681 PPRC1Q5VV67 1664 aaKnown RBP37.64■■■■□ 3.62
PDGFA-205ENST00000426681 CFAP43Q8NDM7 1665 aa37.64■■■■□ 3.62
PDGFA-205ENST00000426681 LRRIQ1Q96JM4 1722 aa37.63■■■■□ 3.61
PDGFA-205ENST00000426681 ABCA9Q8IUA7 1624 aa37.59■■■■□ 3.61
PDGFA-205ENST00000426681 CD109Q6YHK3 1445 aa37.59■■■■□ 3.61
PDGFA-205ENST00000426681 CCDC18Q5T9S5 1454 aa37.58■■■■□ 3.61
PDGFA-205ENST00000426681 CDK11AQ9UQ88 783 aaPredicted RBP37.58■■■■□ 3.61
PDGFA-205ENST00000426681 TEX14Q8IWB6 1497 aa37.55■■■■□ 3.6
PDGFA-205ENST00000426681 MAGI3Q5TCQ9 1506 aa37.55■■■■□ 3.6
PDGFA-205ENST00000426681 TROQ12816 1431 aaPredicted RBP37.45■■■■□ 3.59
PDGFA-205ENST00000426681 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.43■■■■□ 3.582e-6■■■■■ 37.8
PDGFA-205ENST00000426681 KDM6BO15054 1643 aa37.41■■■■□ 3.58
PDGFA-205ENST00000426681 VPS8Q8N3P4 1428 aa37.4■■■■□ 3.58
PDGFA-205ENST00000426681 TTC37Q6PGP7 1564 aa37.36■■■■□ 3.57
PDGFA-205ENST00000426681 KIF14Q15058 1648 aa37.34■■■■□ 3.57
PDGFA-205ENST00000426681 COL17A1Q9UMD9 1497 aaPredicted RBP37.3■■■■□ 3.56
PDGFA-205ENST00000426681 PHLDB1Q86UU1 1377 aa37.29■■■■□ 3.56
PDGFA-205ENST00000426681 NEO1Q92859 1461 aa37.27■■■■□ 3.56
PDGFA-205ENST00000426681 PLCH2O75038 1416 aa37.24■■■■□ 3.55
PDGFA-205ENST00000426681 ARAP3Q8WWN8 1544 aa37.23■■■■□ 3.55
PDGFA-205ENST00000426681 MYO5CQ9NQX4 1742 aa37.2■■■■□ 3.55
PDGFA-205ENST00000426681 FANCAO15360 1455 aa37.19■■■■□ 3.54
PDGFA-205ENST00000426681 MTUS2Q5JR59 1369 aa37.18■■■■□ 3.54
PDGFA-205ENST00000426681 CFAP74Q9C0B2 1584 aa37.17■■■■□ 3.54
PDGFA-205ENST00000426681 TIAM1Q13009 1591 aa37.15■■■■□ 3.54
PDGFA-205ENST00000426681 MAP3K1Q13233 1512 aa37.13■■■■□ 3.53
PDGFA-205ENST00000426681 AKNAQ7Z591 1439 aa37.12■■■■□ 3.53
PDGFA-205ENST00000426681 EHBP1L1Q8N3D4 1523 aa37.12■■■■□ 3.53
PDGFA-205ENST00000426681 EFCAB2Q5VUJ9 269 aa37.09■■■■□ 3.53
PDGFA-205ENST00000426681 PREX2Q70Z35 1606 aa37.05■■■■□ 3.52
PDGFA-205ENST00000426681 CDC42BPBQ9Y5S2 1711 aa37.05■■■■□ 3.52
PDGFA-205ENST00000426681 ARHGAP5Q13017 1502 aa37.04■■■■□ 3.52
PDGFA-205ENST00000426681 CDC42BPAQ5VT25 1732 aa37.03■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms